RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 DCAF8Q5TAQ9 597 aa16.27■□□□□ 0.2
CACNA1D-206ENST00000481478 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
CACNA1D-206ENST00000481478 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.2
CACNA1D-206ENST00000481478 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 TAF7LQ5H9L4 462 aa16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 SOX12O15370 315 aa16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 HMMRO75330 724 aa16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 GOLGA6L1Q8N7Z2 621 aa16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
CACNA1D-206ENST00000481478 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
CACNA1D-206ENST00000481478 HNRNPMP52272 730 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACNA1D-206ENST00000481478 KIF3AQ9Y496 699 aa16.25■□□□□ 0.19
CACNA1D-206ENST00000481478 MLECQ14165 292 aa16.24■□□□□ 0.19
CACNA1D-206ENST00000481478 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
CACNA1D-206ENST00000481478 A0A0U1RQG5 324 aaPredicted RBP16.24■□□□□ 0.19
CACNA1D-206ENST00000481478 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
CACNA1D-206ENST00000481478 EIF3AQ14152 1382 aaKnown RBP16.23■□□□□ 0.19
CACNA1D-206ENST00000481478 RALBP1Q15311 655 aa16.22■□□□□ 0.19
CACNA1D-206ENST00000481478 EHBP1L1Q8N3D4 1523 aa16.22■□□□□ 0.19
CACNA1D-206ENST00000481478 RASSF8Q8NHQ8 419 aa16.22■□□□□ 0.19
CACNA1D-206ENST00000481478 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
CACNA1D-206ENST00000481478 ZNF330Q9Y3S2 320 aaPredicted RBP16.21■□□□□ 0.18
CACNA1D-206ENST00000481478 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
CACNA1D-206ENST00000481478 MAP3K1Q13233 1512 aa16.2■□□□□ 0.18
CACNA1D-206ENST00000481478 PTPRGP23470 1445 aa16.2■□□□□ 0.18
CACNA1D-206ENST00000481478 PMFBP1Q8TBY8 1022 aa16.2■□□□□ 0.18
CACNA1D-206ENST00000481478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
CACNA1D-206ENST00000481478 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
CACNA1D-206ENST00000481478 TPM3P06753 285 aa16.19■□□□□ 0.18
CACNA1D-206ENST00000481478 CCDC9Q9Y3X0 531 aaKnown RBP16.19■□□□□ 0.18
CACNA1D-206ENST00000481478 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
CACNA1D-206ENST00000481478 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
CACNA1D-206ENST00000481478 CUL7Q14999 1698 aa16.18■□□□□ 0.18
CACNA1D-206ENST00000481478 B4GALNT3Q6L9W6 998 aa16.17■□□□□ 0.18
CACNA1D-206ENST00000481478 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
CACNA1D-206ENST00000481478 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
CACNA1D-206ENST00000481478 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
CACNA1D-206ENST00000481478 MARCH6O60337 910 aa16.16■□□□□ 0.18
CACNA1D-206ENST00000481478 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
CACNA1D-206ENST00000481478 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
CACNA1D-206ENST00000481478 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
CACNA1D-206ENST00000481478 TCERG1O14776 1098 aaKnown RBP16.16■□□□□ 0.18
CACNA1D-206ENST00000481478 IFT140Q96RY7 1462 aa16.15■□□□□ 0.18
CACNA1D-206ENST00000481478 CHMP3Q9Y3E7 222 aa16.15■□□□□ 0.18
CACNA1D-206ENST00000481478 GGT6Q6P531 493 aa16.15■□□□□ 0.18
CACNA1D-206ENST00000481478 APBB1O00213 710 aa16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 PHF14O94880 888 aa16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 HFM1A2PYH4 1435 aa16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 MIA2Q96PC5 1412 aa16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 STK26Q9P289 416 aa16.14■□□□□ 0.17
CACNA1D-206ENST00000481478 CCDC144AA2RUR9 1427 aa16.13■□□□□ 0.17
CACNA1D-206ENST00000481478 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
CACNA1D-206ENST00000481478 SUPT6HQ7KZ85 1726 aaKnown RBP16.12■□□□□ 0.17
CACNA1D-206ENST00000481478 PRKRIP1Q9H875 184 aaPredicted RBP16.12■□□□□ 0.17
CACNA1D-206ENST00000481478 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
CACNA1D-206ENST00000481478 TNNT3P45378 269 aaPredicted RBP16.11■□□□□ 0.17
CACNA1D-206ENST00000481478 FRAT2O75474 233 aaPredicted RBP16.11■□□□□ 0.17
CACNA1D-206ENST00000481478 USP47Q96K76 1375 aa16.1■□□□□ 0.17
CACNA1D-206ENST00000481478 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
CACNA1D-206ENST00000481478 TPM2P07951 284 aa16.1■□□□□ 0.17
CACNA1D-206ENST00000481478 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
CACNA1D-206ENST00000481478 TSR1Q2NL82 804 aaKnown RBP16.09■□□□□ 0.17
CACNA1D-206ENST00000481478 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
CACNA1D-206ENST00000481478 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
CACNA1D-206ENST00000481478 TRIM6-TRIM34B2RNG4 842 aa16.09■□□□□ 0.17
CACNA1D-206ENST00000481478 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
CACNA1D-206ENST00000481478 VPS53Q5VIR6 699 aa16.08■□□□□ 0.17
CACNA1D-206ENST00000481478 NLRP13Q86W25 1043 aa16.08■□□□□ 0.17
CACNA1D-206ENST00000481478 KRI1Q8N9T8 703 aaKnown RBP16.07■□□□□ 0.16
CACNA1D-206ENST00000481478 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
CACNA1D-206ENST00000481478 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
CACNA1D-206ENST00000481478 AMOTL1Q8IY63 956 aa16.07■□□□□ 0.16
CACNA1D-206ENST00000481478 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
CACNA1D-206ENST00000481478 SF3A1Q15459 793 aaKnown RBP16.06■□□□□ 0.16
CACNA1D-206ENST00000481478 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
CACNA1D-206ENST00000481478 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
CACNA1D-206ENST00000481478 KIF3BO15066 747 aa16.06■□□□□ 0.16
CACNA1D-206ENST00000481478 ST18O60284 1047 aa16.06■□□□□ 0.16
CACNA1D-206ENST00000481478 ANKRD50Q9ULJ7 1429 aa16.06■□□□□ 0.16
CACNA1D-206ENST00000481478 CCDC7Q96M83 1385 aa16.05■□□□□ 0.16
CACNA1D-206ENST00000481478 TPM1P09493 284 aa16.05■□□□□ 0.16
CACNA1D-206ENST00000481478 NGDNQ8NEJ9 315 aaKnown RBP16.05■□□□□ 0.16
CACNA1D-206ENST00000481478 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
CACNA1D-206ENST00000481478 AKAP17AQ02040 695 aaKnown RBP16.05■□□□□ 0.16
CACNA1D-206ENST00000481478 CCDC70Q6NSX1 233 aa16.05■□□□□ 0.16
CACNA1D-206ENST00000481478 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
CACNA1D-206ENST00000481478 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
CACNA1D-206ENST00000481478 AMPHP49418 695 aa16.04■□□□□ 0.16
CACNA1D-206ENST00000481478 CNTLNQ9NXG0 1405 aa16.04■□□□□ 0.16
CACNA1D-206ENST00000481478 TPD52L1Q16890 204 aaPredicted RBP16.04■□□□□ 0.16
CACNA1D-206ENST00000481478 TCEAL9Q9UHQ7 104 aa16.03■□□□□ 0.16
CACNA1D-206ENST00000481478 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
CACNA1D-206ENST00000481478 GOLGA6L3A6NEY3 463 aa16.03■□□□□ 0.16
CACNA1D-206ENST00000481478 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
CACNA1D-206ENST00000481478 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms