RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
CACNA1D-206ENST00000481478 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
CACNA1D-206ENST00000481478 PELP1Q8IZL8 1130 aaKnown RBP20.93■□□□□ 0.94
CACNA1D-206ENST00000481478 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
CACNA1D-206ENST00000481478 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
CACNA1D-206ENST00000481478 FAM9AQ8IZU1 332 aaPredicted RBP20.49■□□□□ 0.87
CACNA1D-206ENST00000481478 APLP2Q06481 763 aa20.4■□□□□ 0.86
CACNA1D-206ENST00000481478 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
CACNA1D-206ENST00000481478 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
CACNA1D-206ENST00000481478 ERICH6Q7L0X2 663 aa19.89■□□□□ 0.77
CACNA1D-206ENST00000481478 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
CACNA1D-206ENST00000481478 ZEB1P37275 1124 aaPredicted RBP19.54■□□□□ 0.72
CACNA1D-206ENST00000481478 NEFLP07196 543 aa19.44■□□□□ 0.7
CACNA1D-206ENST00000481478 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
CACNA1D-206ENST00000481478 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
CACNA1D-206ENST00000481478 ATP1B4Q9UN42 357 aaPredicted RBP19.4■□□□□ 0.7
CACNA1D-206ENST00000481478 TTBK1Q5TCY1 1321 aaPredicted RBP19.38■□□□□ 0.69
CACNA1D-206ENST00000481478 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
CACNA1D-206ENST00000481478 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
CACNA1D-206ENST00000481478 MYT1Q01538 1121 aa19.23■□□□□ 0.67
CACNA1D-206ENST00000481478 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
CACNA1D-206ENST00000481478 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
CACNA1D-206ENST00000481478 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.66
CACNA1D-206ENST00000481478 DAXXQ9UER7 740 aaPredicted RBP19.09■□□□□ 0.65
CACNA1D-206ENST00000481478 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
CACNA1D-206ENST00000481478 YTHDC1Q96MU7 727 aaKnown RBP18.93■□□□□ 0.62
CACNA1D-206ENST00000481478 ABCC9O60706 1549 aa18.92■□□□□ 0.62
CACNA1D-206ENST00000481478 TRIM26Q12899 539 aaPredicted RBP18.92■□□□□ 0.62
CACNA1D-206ENST00000481478 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
CACNA1D-206ENST00000481478 HRCP23327 699 aa18.84■□□□□ 0.61
CACNA1D-206ENST00000481478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
CACNA1D-206ENST00000481478 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
CACNA1D-206ENST00000481478 POLR3GLQ9BT43 218 aa18.69■□□□□ 0.58
CACNA1D-206ENST00000481478 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
CACNA1D-206ENST00000481478 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
CACNA1D-206ENST00000481478 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
CACNA1D-206ENST00000481478 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
CACNA1D-206ENST00000481478 CLSPNQ9HAW4 1339 aa18.5■□□□□ 0.55
CACNA1D-206ENST00000481478 ITGAEP38570 1179 aa18.49■□□□□ 0.55
CACNA1D-206ENST00000481478 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
CACNA1D-206ENST00000481478 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
CACNA1D-206ENST00000481478 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
CACNA1D-206ENST00000481478 ZBTB47Q9UFB7 747 aaPredicted RBP18.36■□□□□ 0.53
CACNA1D-206ENST00000481478 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
CACNA1D-206ENST00000481478 NACADO15069 1562 aa18.25■□□□□ 0.51
CACNA1D-206ENST00000481478 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
CACNA1D-206ENST00000481478 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
CACNA1D-206ENST00000481478 MYO15BQ96JP2 1530 aa18.17■□□□□ 0.5
CACNA1D-206ENST00000481478 NEFMP07197 916 aa18.14■□□□□ 0.49
CACNA1D-206ENST00000481478 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
CACNA1D-206ENST00000481478 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
CACNA1D-206ENST00000481478 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
CACNA1D-206ENST00000481478 CANXP27824 592 aaKnown RBP18.01■□□□□ 0.47
CACNA1D-206ENST00000481478 ANP32CO43423 234 aa17.97■□□□□ 0.47
CACNA1D-206ENST00000481478 SLC24A1O60721 1099 aa17.97■□□□□ 0.47
CACNA1D-206ENST00000481478 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
CACNA1D-206ENST00000481478 CDK11AQ9UQ88 783 aaPredicted RBP17.95■□□□□ 0.46
CACNA1D-206ENST00000481478 BCANQ96GW7 911 aa17.92■□□□□ 0.46
CACNA1D-206ENST00000481478 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
CACNA1D-206ENST00000481478 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
CACNA1D-206ENST00000481478 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
CACNA1D-206ENST00000481478 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
CACNA1D-206ENST00000481478 EEA1Q15075 1411 aa17.82■□□□□ 0.44
CACNA1D-206ENST00000481478 ESF1Q9H501 851 aaKnown RBP17.8■□□□□ 0.44
CACNA1D-206ENST00000481478 ANP32BQ92688 251 aaKnown RBP17.79■□□□□ 0.44
CACNA1D-206ENST00000481478 FBLN2P98095 1184 aa17.76■□□□□ 0.43
CACNA1D-206ENST00000481478 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
CACNA1D-206ENST00000481478 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
CACNA1D-206ENST00000481478 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
CACNA1D-206ENST00000481478 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
CACNA1D-206ENST00000481478 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
CACNA1D-206ENST00000481478 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
CACNA1D-206ENST00000481478 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
CACNA1D-206ENST00000481478 CLIP1P30622 1438 aa17.64■□□□□ 0.41
CACNA1D-206ENST00000481478 UPF2Q9HAU5 1272 aaKnown RBP17.63■□□□□ 0.41
CACNA1D-206ENST00000481478 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
CACNA1D-206ENST00000481478 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
CACNA1D-206ENST00000481478 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
CACNA1D-206ENST00000481478 P3H3Q8IVL6 736 aa17.58■□□□□ 0.4
CACNA1D-206ENST00000481478 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
CACNA1D-206ENST00000481478 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
CACNA1D-206ENST00000481478 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
CACNA1D-206ENST00000481478 WIZO95785 1651 aa17.52■□□□□ 0.4
CACNA1D-206ENST00000481478 CDK11BP21127 795 aaKnown RBP17.52■□□□□ 0.4
CACNA1D-206ENST00000481478 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
CACNA1D-206ENST00000481478 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
CACNA1D-206ENST00000481478 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
CACNA1D-206ENST00000481478 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
CACNA1D-206ENST00000481478 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
CACNA1D-206ENST00000481478 CHGAP10645 457 aaKnown RBP17.45■□□□□ 0.38
CACNA1D-206ENST00000481478 KIF27Q86VH2 1401 aa17.43■□□□□ 0.38
CACNA1D-206ENST00000481478 GLIPR1L2Q4G1C9 344 aa17.43■□□□□ 0.38
CACNA1D-206ENST00000481478 SOGA1O94964 1423 aa17.43■□□□□ 0.38
CACNA1D-206ENST00000481478 NPM2Q86SE8 214 aaKnown RBP17.42■□□□□ 0.38
CACNA1D-206ENST00000481478 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
CACNA1D-206ENST00000481478 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
CACNA1D-206ENST00000481478 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
CACNA1D-206ENST00000481478 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
CACNA1D-206ENST00000481478 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
CACNA1D-206ENST00000481478 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms