RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
NUP35-209ENST00000479162 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
NUP35-209ENST00000479162 LETM1O95202 739 aaPredicted RBP13.54□□□□□ -0.24
NUP35-209ENST00000479162 MTERF4Q7Z6M4 381 aaKnown RBP13.54□□□□□ -0.24
NUP35-209ENST00000479162 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
NUP35-209ENST00000479162 OS9Q13438 667 aaPredicted RBP13.53□□□□□ -0.24
NUP35-209ENST00000479162 IGF1RP08069 1367 aa13.53□□□□□ -0.24
NUP35-209ENST00000479162 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
NUP35-209ENST00000479162 PRXQ9BXM0 1461 aa13.52□□□□□ -0.24
NUP35-209ENST00000479162 TRIM52Q96A61 297 aa13.52□□□□□ -0.24
NUP35-209ENST00000479162 GTPBP4Q9BZE4 634 aaKnown RBP13.52□□□□□ -0.24
NUP35-209ENST00000479162 SLC20A2Q08357 652 aa13.51□□□□□ -0.25
NUP35-209ENST00000479162 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
NUP35-209ENST00000479162 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
NUP35-209ENST00000479162 ZSCAN20P17040 1043 aaPredicted RBP13.49□□□□□ -0.25
NUP35-209ENST00000479162 SETQ01105 290 aaPredicted RBP13.49□□□□□ -0.25
NUP35-209ENST00000479162 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
NUP35-209ENST00000479162 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
NUP35-209ENST00000479162 RALBP1Q15311 655 aa13.48□□□□□ -0.25
NUP35-209ENST00000479162 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
NUP35-209ENST00000479162 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
NUP35-209ENST00000479162 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
NUP35-209ENST00000479162 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
NUP35-209ENST00000479162 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
NUP35-209ENST00000479162 P3H3Q8IVL6 736 aa13.46□□□□□ -0.25
NUP35-209ENST00000479162 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.26
NUP35-209ENST00000479162 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
NUP35-209ENST00000479162 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
NUP35-209ENST00000479162 YY1AP1Q9H869 796 aa13.45□□□□□ -0.26
NUP35-209ENST00000479162 GEMIN8Q9NWZ8 242 aaKnown RBP13.45□□□□□ -0.26
NUP35-209ENST00000479162 GOLGA6L3A6NEY3 463 aa13.44□□□□□ -0.26
NUP35-209ENST00000479162 EGFL6Q8IUX8 553 aa13.44□□□□□ -0.26
NUP35-209ENST00000479162 UGGT2Q9NYU1 1516 aa13.43□□□□□ -0.26
NUP35-209ENST00000479162 KIAA1211Q6ZU35 1233 aa13.43□□□□□ -0.26
NUP35-209ENST00000479162 CEP120Q8N960 986 aa13.43□□□□□ -0.26
NUP35-209ENST00000479162 ZNF526Q8TF50 670 aaPredicted RBP13.43□□□□□ -0.26
NUP35-209ENST00000479162 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
NUP35-209ENST00000479162 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
NUP35-209ENST00000479162 ZBTB22O15209 634 aa13.42□□□□□ -0.26
NUP35-209ENST00000479162 TERF1P54274 439 aa13.42□□□□□ -0.26
NUP35-209ENST00000479162 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
NUP35-209ENST00000479162 IQGAP2Q13576 1575 aa13.41□□□□□ -0.26
NUP35-209ENST00000479162 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
NUP35-209ENST00000479162 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
NUP35-209ENST00000479162 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
NUP35-209ENST00000479162 GPATCH11Q8N954 259 aa13.41□□□□□ -0.26
NUP35-209ENST00000479162 ANAPC15P60006 121 aa13.4□□□□□ -0.26
NUP35-209ENST00000479162 NBPF20Q3BBV1 942 aa13.4□□□□□ -0.26
NUP35-209ENST00000479162 ESPNB1AK53 854 aa13.4□□□□□ -0.26
NUP35-209ENST00000479162 RIPK4P57078 832 aa13.4□□□□□ -0.27
NUP35-209ENST00000479162 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
NUP35-209ENST00000479162 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
NUP35-209ENST00000479162 CGNQ9P2M7 1197 aaKnown RBP13.38□□□□□ -0.27
NUP35-209ENST00000479162 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
NUP35-209ENST00000479162 SH3BP1Q9Y3L3 701 aa13.37□□□□□ -0.27
NUP35-209ENST00000479162 CCDC94Q9BW85 323 aaPredicted RBP13.36□□□□□ -0.27
NUP35-209ENST00000479162 CHMP4CQ96CF2 233 aa13.36□□□□□ -0.27
NUP35-209ENST00000479162 SAMD9Q5K651 1589 aa13.36□□□□□ -0.27
NUP35-209ENST00000479162 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
NUP35-209ENST00000479162 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
NUP35-209ENST00000479162 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
NUP35-209ENST00000479162 EFCAB5A4FU69 1503 aa13.34□□□□□ -0.27
NUP35-209ENST00000479162 HSP90AB3PQ58FF7 597 aa13.33□□□□□ -0.28
NUP35-209ENST00000479162 CC2D2BQ6DHV5 1058 aa13.33□□□□□ -0.28
NUP35-209ENST00000479162 BANK1Q8NDB2 785 aa13.32□□□□□ -0.28
NUP35-209ENST00000479162 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
NUP35-209ENST00000479162 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
NUP35-209ENST00000479162 TMC1Q8TDI8 760 aa13.32□□□□□ -0.28
NUP35-209ENST00000479162 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
NUP35-209ENST00000479162 KIAA0556O60303 1618 aa13.31□□□□□ -0.28
NUP35-209ENST00000479162 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
NUP35-209ENST00000479162 IRF6O14896 467 aa13.31□□□□□ -0.28
NUP35-209ENST00000479162 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
NUP35-209ENST00000479162 XRCC6P12956 609 aaKnown RBP eCLIP13.3□□□□□ -0.28
NUP35-209ENST00000479162 LMOD3Q0VAK6 560 aa13.3□□□□□ -0.28
NUP35-209ENST00000479162 MAFGO15525 162 aa13.29□□□□□ -0.28
NUP35-209ENST00000479162 NBPF11Q86T75 865 aa13.29□□□□□ -0.28
NUP35-209ENST00000479162 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
NUP35-209ENST00000479162 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.29□□□□□ -0.28
NUP35-209ENST00000479162 UHRF1BP1LA0JNW5 1464 aa13.28□□□□□ -0.28
NUP35-209ENST00000479162 MPNDQ8N594 471 aa13.27□□□□□ -0.28
NUP35-209ENST00000479162 POGKQ9P215 609 aa13.27□□□□□ -0.28
NUP35-209ENST00000479162 TTC36A6NLP5 189 aa13.27□□□□□ -0.29
NUP35-209ENST00000479162 CDCA8Q53HL2 280 aa13.27□□□□□ -0.29
NUP35-209ENST00000479162 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
NUP35-209ENST00000479162 OFD1O75665 1012 aa13.26□□□□□ -0.29
NUP35-209ENST00000479162 KCNJ4P48050 445 aa13.26□□□□□ -0.29
NUP35-209ENST00000479162 DISP1Q96F81 1524 aa13.26□□□□□ -0.29
NUP35-209ENST00000479162 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
NUP35-209ENST00000479162 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
NUP35-209ENST00000479162 ZBTB9Q96C00 473 aa13.25□□□□□ -0.29
NUP35-209ENST00000479162 DYNC1I1O14576 645 aa13.24□□□□□ -0.29
NUP35-209ENST00000479162 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
NUP35-209ENST00000479162 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
NUP35-209ENST00000479162 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
NUP35-209ENST00000479162 CARMIL2Q6F5E8 1435 aa13.24□□□□□ -0.29
NUP35-209ENST00000479162 GOLIM4O00461 696 aa13.23□□□□□ -0.29
NUP35-209ENST00000479162 PDE4AP27815 886 aa13.23□□□□□ -0.29
NUP35-209ENST00000479162 TSPYL1Q9H0U9 437 aa13.23□□□□□ -0.29
NUP35-209ENST00000479162 ZNF500O60304 480 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms