RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 ARHGEF5Q12774 1597 aa5.82□□□□□ -1.48
USP25-208ENST00000478932 CROCC2H7BZ55 1655 aa5.82□□□□□ -1.48
USP25-208ENST00000478932 DCAF11Q8TEB1 546 aa5.82□□□□□ -1.48
USP25-208ENST00000478932 MYO5CQ9NQX4 1742 aa5.82□□□□□ -1.48
USP25-208ENST00000478932 ADGBQ8N7X0 1667 aa5.82□□□□□ -1.48
USP25-208ENST00000478932 FANCAO15360 1455 aa5.81□□□□□ -1.48
USP25-208ENST00000478932 C11orf95C9JLR9 678 aaPredicted RBP5.81□□□□□ -1.48
USP25-208ENST00000478932 CENPBP07199 599 aaPredicted RBP5.81□□□□□ -1.48
USP25-208ENST00000478932 U3KPZ7 1027 aaPredicted RBP5.81□□□□□ -1.48
USP25-208ENST00000478932 SCAPERQ9BY12 1400 aa5.81□□□□□ -1.48
USP25-208ENST00000478932 WASHC2AQ641Q2 1341 aa5.8□□□□□ -1.48
USP25-208ENST00000478932 KIF3BO15066 747 aa5.8□□□□□ -1.48
USP25-208ENST00000478932 TEX14Q8IWB6 1497 aa5.8□□□□□ -1.48
USP25-208ENST00000478932 RAPGEF3O95398 923 aa5.79□□□□□ -1.48
USP25-208ENST00000478932 CD109Q6YHK3 1445 aa5.79□□□□□ -1.48
USP25-208ENST00000478932 FAM135AQ9P2D6 1515 aa5.79□□□□□ -1.48
USP25-208ENST00000478932 ADGRL1O94910 1474 aa5.79□□□□□ -1.48
USP25-208ENST00000478932 ABCC1P33527 1531 aa5.78□□□□□ -1.48
USP25-208ENST00000478932 PLA2R1Q13018 1463 aa5.78□□□□□ -1.48
USP25-208ENST00000478932 ANP32CO43423 234 aa5.78□□□□□ -1.48
USP25-208ENST00000478932 CNGB1Q14028 1251 aaPredicted RBP5.78□□□□□ -1.48
USP25-208ENST00000478932 POLR3GLQ9BT43 218 aa5.78□□□□□ -1.48
USP25-208ENST00000478932 CCDC144AA2RUR9 1427 aa5.77□□□□□ -1.49
USP25-208ENST00000478932 CARD11Q9BXL7 1154 aa5.77□□□□□ -1.49
USP25-208ENST00000478932 DUOX2Q9NRD8 1548 aa5.77□□□□□ -1.49
USP25-208ENST00000478932 NBPF1Q3BBV0 1214 aa5.77□□□□□ -1.49
USP25-208ENST00000478932 GGT6Q6P531 493 aa5.77□□□□□ -1.49
USP25-208ENST00000478932 GTF3C3Q9Y5Q9 886 aa5.77□□□□□ -1.49
USP25-208ENST00000478932 ABCA9Q8IUA7 1624 aa5.76□□□□□ -1.49
USP25-208ENST00000478932 FAM69CQ0P6D2 419 aa5.76□□□□□ -1.49
USP25-208ENST00000478932 RTEL1-TNFRSF6BF6WH68 1400 aa5.76□□□□□ -1.49
USP25-208ENST00000478932 MAST1Q9Y2H9 1570 aa5.76□□□□□ -1.49
USP25-208ENST00000478932 ST20-MTHFSA0A0A6YYL1 179 aa5.76□□□□□ -1.49
USP25-208ENST00000478932 ARAP3Q8WWN8 1544 aa5.75□□□□□ -1.49
USP25-208ENST00000478932 KDM5DQ9BY66 1539 aa5.75□□□□□ -1.49
USP25-208ENST00000478932 SPATA31E1Q6ZUB1 1445 aa5.75□□□□□ -1.49
USP25-208ENST00000478932 ERBINQ96RT1 1412 aa5.75□□□□□ -1.49
USP25-208ENST00000478932 KIF7Q2M1P5 1343 aa5.75□□□□□ -1.49
USP25-208ENST00000478932 PLXNC1O60486 1568 aa5.75□□□□□ -1.49
USP25-208ENST00000478932 DHX29Q7Z478 1369 aaKnown RBP5.75□□□□□ -1.49
USP25-208ENST00000478932 USP47Q96K76 1375 aa5.75□□□□□ -1.49
USP25-208ENST00000478932 ZFYVE16Q7Z3T8 1539 aa5.74□□□□□ -1.49
USP25-208ENST00000478932 ATP7AQ04656 1500 aa5.74□□□□□ -1.49
USP25-208ENST00000478932 CCDC7Q96M83 1385 aa5.74□□□□□ -1.49
USP25-208ENST00000478932 SLC4A2P04920 1241 aa5.74□□□□□ -1.49
USP25-208ENST00000478932 ZNF518AQ6AHZ1 1483 aa5.73□□□□□ -1.49
USP25-208ENST00000478932 ROCK2O75116 1388 aaKnown RBP5.73□□□□□ -1.49
USP25-208ENST00000478932 KANK1Q14678 1352 aa5.72□□□□□ -1.49
USP25-208ENST00000478932 CCDC184Q52MB2 194 aa5.72□□□□□ -1.49
USP25-208ENST00000478932 UNC13BO14795 1591 aa5.72□□□□□ -1.49
USP25-208ENST00000478932 WASHC2CQ9Y4E1 1318 aa5.72□□□□□ -1.49
USP25-208ENST00000478932 UHRF1BP1Q6BDS2 1440 aa5.72□□□□□ -1.49
USP25-208ENST00000478932 MAGI2Q86UL8 1455 aa5.71□□□□□ -1.49
USP25-208ENST00000478932 IQGAP3Q86VI3 1631 aa5.71□□□□□ -1.49
USP25-208ENST00000478932 CCER2I3L3R5 266 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 CHGAP10645 457 aaKnown RBP5.71□□□□□ -1.5
USP25-208ENST00000478932 DSG3P32926 999 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 POGZQ7Z3K3 1410 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 CFAP65Q6ZU64 1925 aaKnown RBP5.71□□□□□ -1.5
USP25-208ENST00000478932 A2MP01023 1474 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 PRKRIP1Q9H875 184 aaPredicted RBP5.71□□□□□ -1.5
USP25-208ENST00000478932 PRAG1Q86YV5 1406 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 RIMBP3CA6NJZ7 1639 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 RIMBP3BA6NNM3 1639 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 RIMBP3Q9UFD9 1639 aa5.71□□□□□ -1.5
USP25-208ENST00000478932 KIDINS220Q9ULH0 1771 aa5.7□□□□□ -1.5
USP25-208ENST00000478932 ATP10AO60312 1499 aa5.7□□□□□ -1.5
USP25-208ENST00000478932 INO80Q9ULG1 1556 aaPredicted RBP5.7□□□□□ -1.5
USP25-208ENST00000478932 RALGAPBQ86X10 1494 aa5.69□□□□□ -1.5
USP25-208ENST00000478932 MLH3Q9UHC1 1453 aa5.69□□□□□ -1.5
USP25-208ENST00000478932 SPINK5Q9NQ38 1064 aaPredicted RBP5.69□□□□□ -1.5
USP25-208ENST00000478932 CNTLNQ9NXG0 1405 aa5.69□□□□□ -1.5
USP25-208ENST00000478932 YEATS2Q9ULM3 1422 aa5.69□□□□□ -1.5
USP25-208ENST00000478932 NUTM2DQ5VT03 806 aaPredicted RBP5.69□□□□□ -1.5
USP25-208ENST00000478932 E9PCH4 1651 aa5.69□□□□□ -1.5
USP25-208ENST00000478932 PTPRTO14522 1441 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 CAPN15O75808 1086 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 CFAP70Q5T0N1 1121 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 FAM9BQ8IZU0 186 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 TESK2Q96S53 571 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 UGGT1Q9NYU2 1555 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 NEO1Q92859 1461 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 BCORL1Q5H9F3 1711 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 ADGRF5Q8IZF2 1346 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 MRS2Q9HD23 443 aa5.68□□□□□ -1.5
USP25-208ENST00000478932 KDM5CP41229 1560 aa5.67□□□□□ -1.5
USP25-208ENST00000478932 MLECQ14165 292 aa5.67□□□□□ -1.5
USP25-208ENST00000478932 NPATQ14207 1427 aa5.67□□□□□ -1.5
USP25-208ENST00000478932 MROH1Q8NDA8 1641 aa5.67□□□□□ -1.5
USP25-208ENST00000478932 SENP3-EIF4A1A0A087X0R7 540 aa5.67□□□□□ -1.5
USP25-208ENST00000478932 HNRNPUQ00839 825 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP25-208ENST00000478932 DEPDC5O75140 1603 aa5.67□□□□□ -1.5
USP25-208ENST00000478932 PRDM15P57071 1507 aaPredicted RBP5.66□□□□□ -1.5
USP25-208ENST00000478932 TSPOAP1O95153 1857 aa5.66□□□□□ -1.5
USP25-208ENST00000478932 FBXO31Q5XUX0 539 aaPredicted RBP5.66□□□□□ -1.5
USP25-208ENST00000478932 FRMPD1Q5SYB0 1578 aa5.66□□□□□ -1.5
USP25-208ENST00000478932 VWDEQ8N2E2 1590 aa5.66□□□□□ -1.5
USP25-208ENST00000478932 ARID4BQ4LE39 1312 aaPredicted RBP5.66□□□□□ -1.5
USP25-208ENST00000478932 IDI1Q13907 227 aa5.66□□□□□ -1.5
USP25-208ENST00000478932 GPRASP1Q5JY77 1395 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms