RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 ST18O60284 1047 aa13.42□□□□□ -0.26
SCN5A-208ENST00000450102 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
SCN5A-208ENST00000450102 EID1Q9Y6B2 187 aa13.42□□□□□ -0.26
SCN5A-208ENST00000450102 GOLGA6L19H0YKK7 550 aa13.42□□□□□ -0.26
SCN5A-208ENST00000450102 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
SCN5A-208ENST00000450102 FBXW7Q969H0 707 aa13.41□□□□□ -0.26
SCN5A-208ENST00000450102 RCAN3Q9UKA8 241 aa13.41□□□□□ -0.26
SCN5A-208ENST00000450102 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
SCN5A-208ENST00000450102 EVA1CP58658 441 aa13.41□□□□□ -0.26
SCN5A-208ENST00000450102 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
SCN5A-208ENST00000450102 BECN2A8MW95 431 aa13.4□□□□□ -0.26
SCN5A-208ENST00000450102 GPS2Q13227 327 aa13.4□□□□□ -0.26
SCN5A-208ENST00000450102 CCDC47Q96A33 483 aaKnown RBP13.4□□□□□ -0.26
SCN5A-208ENST00000450102 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.26
SCN5A-208ENST00000450102 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
SCN5A-208ENST00000450102 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
SCN5A-208ENST00000450102 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
SCN5A-208ENST00000450102 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
SCN5A-208ENST00000450102 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
SCN5A-208ENST00000450102 LMOD3Q0VAK6 560 aa13.38□□□□□ -0.27
SCN5A-208ENST00000450102 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
SCN5A-208ENST00000450102 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
SCN5A-208ENST00000450102 TRIM29Q14134 588 aa13.38□□□□□ -0.27
SCN5A-208ENST00000450102 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
SCN5A-208ENST00000450102 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
SCN5A-208ENST00000450102 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
SCN5A-208ENST00000450102 CPLX2Q6PUV4 134 aaKnown RBP13.36□□□□□ -0.27
SCN5A-208ENST00000450102 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
SCN5A-208ENST00000450102 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
SCN5A-208ENST00000450102 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
SCN5A-208ENST00000450102 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
SCN5A-208ENST00000450102 ODF2Q5BJF6 829 aa13.35□□□□□ -0.27
SCN5A-208ENST00000450102 C1orf141Q5JVX7 400 aa13.35□□□□□ -0.27
SCN5A-208ENST00000450102 VPS37DQ86XT2 251 aa13.35□□□□□ -0.27
SCN5A-208ENST00000450102 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
SCN5A-208ENST00000450102 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
SCN5A-208ENST00000450102 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
SCN5A-208ENST00000450102 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCN5A-208ENST00000450102 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
SCN5A-208ENST00000450102 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
SCN5A-208ENST00000450102 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
SCN5A-208ENST00000450102 APPP05067 770 aa13.34□□□□□ -0.27
SCN5A-208ENST00000450102 PKD2Q13563 968 aa13.34□□□□□ -0.27
SCN5A-208ENST00000450102 CCDC146Q8IYE0 955 aa13.34□□□□□ -0.27
SCN5A-208ENST00000450102 ZNF592Q92610 1267 aa13.34□□□□□ -0.27
SCN5A-208ENST00000450102 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
SCN5A-208ENST00000450102 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
SCN5A-208ENST00000450102 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCN5A-208ENST00000450102 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.28
SCN5A-208ENST00000450102 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
SCN5A-208ENST00000450102 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
SCN5A-208ENST00000450102 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
SCN5A-208ENST00000450102 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
SCN5A-208ENST00000450102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
SCN5A-208ENST00000450102 RALBP1Q15311 655 aa13.31□□□□□ -0.28
SCN5A-208ENST00000450102 PAF1Q8N7H5 531 aa13.31□□□□□ -0.28
SCN5A-208ENST00000450102 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
SCN5A-208ENST00000450102 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
SCN5A-208ENST00000450102 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
SCN5A-208ENST00000450102 SYTL4Q96C24 671 aaPredicted RBP13.3□□□□□ -0.28
SCN5A-208ENST00000450102 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
SCN5A-208ENST00000450102 ZFYVE27Q5T4F4 411 aa13.3□□□□□ -0.28
SCN5A-208ENST00000450102 DIAPH3Q9NSV4 1193 aa13.3□□□□□ -0.28
SCN5A-208ENST00000450102 CPLX1O14810 134 aa13.3□□□□□ -0.28
SCN5A-208ENST00000450102 NEXNQ0ZGT2 675 aa13.29□□□□□ -0.28
SCN5A-208ENST00000450102 HOOK1Q9UJC3 728 aaKnown RBP13.29□□□□□ -0.28
SCN5A-208ENST00000450102 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
SCN5A-208ENST00000450102 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
SCN5A-208ENST00000450102 FOXD1Q16676 465 aa13.28□□□□□ -0.28
SCN5A-208ENST00000450102 NFXL1Q6ZNB6 911 aa13.28□□□□□ -0.28
SCN5A-208ENST00000450102 CDR1P51861 262 aa13.28□□□□□ -0.28
SCN5A-208ENST00000450102 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
SCN5A-208ENST00000450102 RUFY1Q96T51 708 aa13.28□□□□□ -0.28
SCN5A-208ENST00000450102 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
SCN5A-208ENST00000450102 DDX49Q9Y6V7 483 aaKnown RBP13.28□□□□□ -0.28
SCN5A-208ENST00000450102 ERICH2A1L162 156 aa13.28□□□□□ -0.28
SCN5A-208ENST00000450102 TRDNQ13061 729 aa13.27□□□□□ -0.28
SCN5A-208ENST00000450102 TEFQ10587 303 aa13.27□□□□□ -0.28
SCN5A-208ENST00000450102 ANKRD45Q5TZF3 282 aa13.27□□□□□ -0.29
SCN5A-208ENST00000450102 AEBP2Q6ZN18 517 aaPredicted RBP13.27□□□□□ -0.29
SCN5A-208ENST00000450102 EEA1Q15075 1411 aa13.27□□□□□ -0.29
SCN5A-208ENST00000450102 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
SCN5A-208ENST00000450102 C9orf78Q9NZ63 289 aaPredicted RBP13.26□□□□□ -0.29
SCN5A-208ENST00000450102 HSP90AB2PQ58FF8 381 aa13.26□□□□□ -0.29
SCN5A-208ENST00000450102 RUFY2Q8WXA3 655 aa13.26□□□□□ -0.29
SCN5A-208ENST00000450102 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
SCN5A-208ENST00000450102 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
SCN5A-208ENST00000450102 ANO2Q9NQ90 1003 aa13.26□□□□□ -0.29
SCN5A-208ENST00000450102 TEX35Q5T0J7 233 aa13.25□□□□□ -0.29
SCN5A-208ENST00000450102 AK7Q96M32 723 aa13.25□□□□□ -0.29
SCN5A-208ENST00000450102 TMEM132AQ24JP5 1023 aa13.25□□□□□ -0.29
SCN5A-208ENST00000450102 HSP90AA2PQ14568 343 aaPredicted RBP13.25□□□□□ -0.29
SCN5A-208ENST00000450102 KIF3BO15066 747 aa13.24□□□□□ -0.29
SCN5A-208ENST00000450102 ZKSCAN1P17029 563 aaPredicted RBP13.24□□□□□ -0.29
SCN5A-208ENST00000450102 EPS15P42566 896 aa13.24□□□□□ -0.29
SCN5A-208ENST00000450102 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
SCN5A-208ENST00000450102 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
SCN5A-208ENST00000450102 IFIT2P09913 472 aaKnown RBP13.23□□□□□ -0.29
SCN5A-208ENST00000450102 RRP7AQ9Y3A4 280 aaKnown RBP13.23□□□□□ -0.29
SCN5A-208ENST00000450102 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms