RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
FN1-212ENST00000446046 AMOTL1Q8IY63 956 aa14.67□□□□□ -0.06
FN1-212ENST00000446046 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
FN1-212ENST00000446046 SYAP1Q96A49 352 aaPredicted RBP14.66□□□□□ -0.06
FN1-212ENST00000446046 NOL10Q9BSC4 688 aaKnown RBP14.66□□□□□ -0.06
FN1-212ENST00000446046 SUPT6HQ7KZ85 1726 aaKnown RBP14.65□□□□□ -0.06
FN1-212ENST00000446046 DRC7Q8IY82 874 aa14.65□□□□□ -0.06
FN1-212ENST00000446046 CGNL1Q0VF96 1302 aa14.64□□□□□ -0.07
FN1-212ENST00000446046 KIF21BO75037 1637 aa14.64□□□□□ -0.07
FN1-212ENST00000446046 ATF3P18847 181 aa14.63□□□□□ -0.07
FN1-212ENST00000446046 HMGB2P26583 209 aaKnown RBP14.63□□□□□ -0.07
FN1-212ENST00000446046 COG3Q96JB2 828 aa14.63□□□□□ -0.07
FN1-212ENST00000446046 TRIM34Q9BYJ4 488 aa14.63□□□□□ -0.07
FN1-212ENST00000446046 ITPRIPQ8IWB1 547 aa14.63□□□□□ -0.07
FN1-212ENST00000446046 FHOD3Q2V2M9 1422 aa14.62□□□□□ -0.07
FN1-212ENST00000446046 PSME1Q06323 249 aa14.62□□□□□ -0.07
FN1-212ENST00000446046 USP35Q9P2H5 1018 aa14.62□□□□□ -0.07
FN1-212ENST00000446046 RAB3GAP2Q9H2M9 1393 aa14.62□□□□□ -0.07
FN1-212ENST00000446046 MIA2Q96PC5 1412 aa14.62□□□□□ -0.07
FN1-212ENST00000446046 CFAP65Q6ZU64 1925 aaKnown RBP14.61□□□□□ -0.07
FN1-212ENST00000446046 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
FN1-212ENST00000446046 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
FN1-212ENST00000446046 STAC3Q96MF2 364 aa14.61□□□□□ -0.07
FN1-212ENST00000446046 NEXNQ0ZGT2 675 aa14.61□□□□□ -0.07
FN1-212ENST00000446046 GBP4Q96PP9 640 aa14.61□□□□□ -0.07
FN1-212ENST00000446046 SMC4Q9NTJ3 1288 aa14.6□□□□□ -0.07
FN1-212ENST00000446046 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
FN1-212ENST00000446046 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
FN1-212ENST00000446046 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
FN1-212ENST00000446046 CC2D2AQ9P2K1 1620 aa14.58□□□□□ -0.08
FN1-212ENST00000446046 NOC3LQ8WTT2 800 aaKnown RBP14.58□□□□□ -0.08
FN1-212ENST00000446046 TCEAL9Q9UHQ7 104 aa14.58□□□□□ -0.08
FN1-212ENST00000446046 TEFQ10587 303 aa14.58□□□□□ -0.08
FN1-212ENST00000446046 FGD5Q6ZNL6 1462 aa14.58□□□□□ -0.08
FN1-212ENST00000446046 HSPA5P11021 654 aaKnown RBP14.57□□□□□ -0.08
FN1-212ENST00000446046 WWC1Q8IX03 1113 aa14.57□□□□□ -0.08
FN1-212ENST00000446046 HSP90B1P14625 803 aaKnown RBP14.57□□□□□ -0.08
FN1-212ENST00000446046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
FN1-212ENST00000446046 ROCK1Q13464 1354 aa14.57□□□□□ -0.08
FN1-212ENST00000446046 FAM69CQ0P6D2 419 aa14.57□□□□□ -0.08
FN1-212ENST00000446046 MSNP26038 577 aaKnown RBP14.56□□□□□ -0.08
FN1-212ENST00000446046 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
FN1-212ENST00000446046 CTDP1Q9Y5B0 961 aaPredicted RBP14.56□□□□□ -0.08
FN1-212ENST00000446046 MSH5O43196 834 aa14.56□□□□□ -0.08
FN1-212ENST00000446046 MYOM3Q5VTT5 1437 aa14.56□□□□□ -0.08
FN1-212ENST00000446046 HECW1Q76N89 1606 aa14.56□□□□□ -0.08
FN1-212ENST00000446046 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
FN1-212ENST00000446046 CEP89Q96ST8 783 aa14.56□□□□□ -0.08
FN1-212ENST00000446046 SYNJ2O15056 1496 aa14.55□□□□□ -0.08
FN1-212ENST00000446046 PHF14O94880 888 aa14.55□□□□□ -0.08
FN1-212ENST00000446046 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
FN1-212ENST00000446046 NLRP13Q86W25 1043 aa14.55□□□□□ -0.08
FN1-212ENST00000446046 LTV1Q96GA3 475 aaPredicted RBP14.55□□□□□ -0.08
FN1-212ENST00000446046 MARCH6O60337 910 aa14.55□□□□□ -0.08
FN1-212ENST00000446046 DDX58O95786 925 aaKnown RBP14.55□□□□□ -0.08
FN1-212ENST00000446046 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
FN1-212ENST00000446046 RRBP1Q9P2E9 1410 aaKnown RBP14.54□□□□□ -0.08
FN1-212ENST00000446046 AKAP17AQ02040 695 aaKnown RBP14.54□□□□□ -0.08
FN1-212ENST00000446046 PDE3BQ13370 1112 aa14.54□□□□□ -0.08
FN1-212ENST00000446046 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
FN1-212ENST00000446046 APBB1O00213 710 aa14.53□□□□□ -0.08
FN1-212ENST00000446046 VPS37DQ86XT2 251 aa14.53□□□□□ -0.08
FN1-212ENST00000446046 KIF16BQ96L93 1317 aa14.53□□□□□ -0.08
FN1-212ENST00000446046 VPS53Q5VIR6 699 aa14.52□□□□□ -0.08
FN1-212ENST00000446046 NGEFQ8N5V2 710 aa14.52□□□□□ -0.08
FN1-212ENST00000446046 CUL7Q14999 1698 aa14.52□□□□□ -0.08
FN1-212ENST00000446046 TRAK1Q9UPV9 953 aa14.52□□□□□ -0.09
FN1-212ENST00000446046 PLEKHH2Q8IVE3 1493 aa14.51□□□□□ -0.09
FN1-212ENST00000446046 PRM3Q9NNZ6 103 aa14.51□□□□□ -0.09
FN1-212ENST00000446046 DHX57Q6P158 1386 aaKnown RBP14.51□□□□□ -0.09
FN1-212ENST00000446046 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
FN1-212ENST00000446046 CENPJQ9HC77 1338 aaPredicted RBP14.51□□□□□ -0.09
FN1-212ENST00000446046 ST18O60284 1047 aa14.5□□□□□ -0.09
FN1-212ENST00000446046 SYNE3Q6ZMZ3 975 aa14.5□□□□□ -0.09
FN1-212ENST00000446046 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
FN1-212ENST00000446046 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
FN1-212ENST00000446046 NOP58Q9Y2X3 529 aaKnown RBP14.5□□□□□ -0.09
FN1-212ENST00000446046 CPLX2Q6PUV4 134 aaKnown RBP14.49□□□□□ -0.09
FN1-212ENST00000446046 TCERG1O14776 1098 aaKnown RBP14.49□□□□□ -0.09
FN1-212ENST00000446046 SMG6Q86US8 1419 aaKnown RBP14.48□□□□□ -0.09
FN1-212ENST00000446046 EFCAB5A4FU69 1503 aa14.48□□□□□ -0.09
FN1-212ENST00000446046 FYCO1Q9BQS8 1478 aa14.48□□□□□ -0.09
FN1-212ENST00000446046 CWC22Q9HCG8 908 aaKnown RBP14.48□□□□□ -0.09
FN1-212ENST00000446046 TPM2P07951 284 aa14.48□□□□□ -0.09
FN1-212ENST00000446046 C9orf78Q9NZ63 289 aaPredicted RBP14.48□□□□□ -0.09
FN1-212ENST00000446046 SF3B2Q13435 895 aaKnown RBP14.47□□□□□ -0.09
FN1-212ENST00000446046 KRI1Q8N9T8 703 aaKnown RBP14.47□□□□□ -0.09
FN1-212ENST00000446046 SENP3-EIF4A1A0A087X0R7 540 aa14.47□□□□□ -0.09
FN1-212ENST00000446046 NUTM2FA1L443 756 aa14.47□□□□□ -0.09
FN1-212ENST00000446046 TSR1Q2NL82 804 aaKnown RBP14.47□□□□□ -0.09
FN1-212ENST00000446046 SCAPERQ9BY12 1400 aa14.46□□□□□ -0.09
FN1-212ENST00000446046 RUFY2Q8WXA3 655 aa14.46□□□□□ -0.09
FN1-212ENST00000446046 TOMM22Q9NS69 142 aa14.46□□□□□ -0.09
FN1-212ENST00000446046 B4GALNT3Q6L9W6 998 aa14.46□□□□□ -0.09
FN1-212ENST00000446046 GPRASP1Q5JY77 1395 aa14.46□□□□□ -0.09
FN1-212ENST00000446046 SYTL4Q96C24 671 aaPredicted RBP14.45□□□□□ -0.1
FN1-212ENST00000446046 ATP6V1DQ9Y5K8 247 aa14.45□□□□□ -0.1
FN1-212ENST00000446046 NUTM2DQ5VT03 806 aaPredicted RBP14.45□□□□□ -0.1
FN1-212ENST00000446046 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
FN1-212ENST00000446046 RAPGEF4Q8WZA2 1011 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms