RNA–Protein interactions for RNA: ENST00000442895.6

NUP35-204, Transcript of nucleoporin 35, humanhuman

TSL 4

Gene NUP35, Length 616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-204ENST00000442895 LHX6Q9UPM6 363 aa6.61□□□□□ -1.35
NUP35-204ENST00000442895 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
NUP35-204ENST00000442895 PBRM1Q86U86 1689 aa6.6□□□□□ -1.35
NUP35-204ENST00000442895 TOPBP1Q92547 1522 aa6.6□□□□□ -1.35
NUP35-204ENST00000442895 SOGA1O94964 1423 aa6.59□□□□□ -1.35
NUP35-204ENST00000442895 ZNF787Q6DD87 383 aa6.59□□□□□ -1.35
NUP35-204ENST00000442895 FGD5Q6ZNL6 1462 aa6.59□□□□□ -1.36
NUP35-204ENST00000442895 CEP164Q9UPV0 1460 aa6.59□□□□□ -1.36
NUP35-204ENST00000442895 KIF21BO75037 1637 aa6.58□□□□□ -1.36
NUP35-204ENST00000442895 ABCA5Q8WWZ7 1642 aa6.58□□□□□ -1.36
NUP35-204ENST00000442895 WDR62O43379 1518 aa6.57□□□□□ -1.36
NUP35-204ENST00000442895 POLA1P09884 1462 aaPredicted RBP6.56□□□□□ -1.36
NUP35-204ENST00000442895 GFRA3O60609 400 aa6.56□□□□□ -1.36
NUP35-204ENST00000442895 TRIM41Q8WV44 630 aa6.56□□□□□ -1.36
NUP35-204ENST00000442895 ZNF775Q96BV0 537 aaPredicted RBP6.56□□□□□ -1.36
NUP35-204ENST00000442895 PSDA5PKW4 1024 aaPredicted RBP6.55□□□□□ -1.36
NUP35-204ENST00000442895 LCE2BO14633 110 aa6.55□□□□□ -1.36
NUP35-204ENST00000442895 DMRTA1Q5VZB9 504 aa6.54□□□□□ -1.36
NUP35-204ENST00000442895 ANP32EQ9BTT0 268 aa6.54□□□□□ -1.36
NUP35-204ENST00000442895 CTTNBP2Q8WZ74 1663 aa6.54□□□□□ -1.36
NUP35-204ENST00000442895 ACIN1Q9UKV3 1341 aaKnown RBP6.53□□□□□ -1.36
NUP35-204ENST00000442895 ZEB1P37275 1124 aaPredicted RBP6.53□□□□□ -1.36
NUP35-204ENST00000442895 CUX2O14529 1486 aa6.53□□□□□ -1.36
NUP35-204ENST00000442895 MRC2Q9UBG0 1479 aa6.53□□□□□ -1.36
NUP35-204ENST00000442895 RAD54L2Q9Y4B4 1467 aa6.53□□□□□ -1.36
NUP35-204ENST00000442895 PDS5BQ9NTI5 1447 aa6.52□□□□□ -1.37
NUP35-204ENST00000442895 ABCA10Q8WWZ4 1543 aa6.52□□□□□ -1.37
NUP35-204ENST00000442895 PSEN2P49810 448 aa6.52□□□□□ -1.37
NUP35-204ENST00000442895 EIF4G3O43432 1585 aaKnown RBP6.51□□□□□ -1.37
NUP35-204ENST00000442895 CUL7Q14999 1698 aa6.51□□□□□ -1.37
NUP35-204ENST00000442895 HS6ST3Q8IZP7 471 aa6.5□□□□□ -1.37
NUP35-204ENST00000442895 EFCAB3Q8N7B9 438 aa6.5□□□□□ -1.37
NUP35-204ENST00000442895 DNAJC5Q9H3Z4 198 aa6.5□□□□□ -1.37
NUP35-204ENST00000442895 EEA1Q15075 1411 aa6.5□□□□□ -1.37
NUP35-204ENST00000442895 LOC105371045A0A1W2PR82 267 aa6.49□□□□□ -1.37
NUP35-204ENST00000442895 GOLGA8CPA6NN73 597 aa6.49□□□□□ -1.37
NUP35-204ENST00000442895 KCNH8Q96L42 1107 aa6.49□□□□□ -1.37
NUP35-204ENST00000442895 GTF3C3Q9Y5Q9 886 aa6.49□□□□□ -1.37
NUP35-204ENST00000442895 ERICH3Q5RHP9 1530 aa6.49□□□□□ -1.37
NUP35-204ENST00000442895 PRXQ9BXM0 1461 aa6.48□□□□□ -1.37
NUP35-204ENST00000442895 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
NUP35-204ENST00000442895 THSD4Q6ZMP0 1018 aa6.48□□□□□ -1.37
NUP35-204ENST00000442895 PPARGC1BQ86YN6 1023 aaKnown RBP6.48□□□□□ -1.37
NUP35-204ENST00000442895 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
NUP35-204ENST00000442895 PCDHGA4Q9Y5G9 962 aa6.48□□□□□ -1.37
NUP35-204ENST00000442895 ADAMTS12P58397 1594 aa6.48□□□□□ -1.37
NUP35-204ENST00000442895 RAPGEF2Q9Y4G8 1499 aa6.47□□□□□ -1.37
NUP35-204ENST00000442895 UBE2Q2Q8WVN8 375 aa6.47□□□□□ -1.37
NUP35-204ENST00000442895 TULP1O00294 542 aaPredicted RBP6.46□□□□□ -1.38
NUP35-204ENST00000442895 LRRIQ1Q96JM4 1722 aa6.46□□□□□ -1.38
NUP35-204ENST00000442895 ZNF608Q9ULD9 1512 aaPredicted RBP6.45□□□□□ -1.38
NUP35-204ENST00000442895 CHD1O14646 1710 aa6.45□□□□□ -1.38
NUP35-204ENST00000442895 GOLGA3Q08378 1498 aa6.45□□□□□ -1.38
NUP35-204ENST00000442895 WNT2BQ93097 391 aa6.44□□□□□ -1.38
NUP35-204ENST00000442895 ERCC6Q03468 1493 aa6.44□□□□□ -1.38
NUP35-204ENST00000442895 KIF27Q86VH2 1401 aa6.43□□□□□ -1.38
NUP35-204ENST00000442895 NRG2O14511 850 aaPredicted RBP6.43□□□□□ -1.38
NUP35-204ENST00000442895 TIMELESSQ9UNS1 1208 aa6.42□□□□□ -1.38
NUP35-204ENST00000442895 GAPVD1Q14C86 1478 aa6.41□□□□□ -1.38
NUP35-204ENST00000442895 RIOK3O14730 519 aaKnown RBP6.41□□□□□ -1.38
NUP35-204ENST00000442895 SOX12O15370 315 aa6.41□□□□□ -1.38
NUP35-204ENST00000442895 SLC34A2O95436 690 aa6.41□□□□□ -1.38
NUP35-204ENST00000442895 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
NUP35-204ENST00000442895 PPP4R3BQ5MIZ7 849 aa6.41□□□□□ -1.38
NUP35-204ENST00000442895 VPS9D1Q9Y2B5 631 aa6.41□□□□□ -1.38
NUP35-204ENST00000442895 IGF1RP08069 1367 aa6.41□□□□□ -1.38
NUP35-204ENST00000442895 IFT140Q96RY7 1462 aa6.41□□□□□ -1.38
NUP35-204ENST00000442895 GTPBP6O43824 516 aaPredicted RBP6.4□□□□□ -1.38
NUP35-204ENST00000442895 ITGBL1O95965 494 aaPredicted RBP6.4□□□□□ -1.38
NUP35-204ENST00000442895 KCNK17Q96T54 332 aa6.4□□□□□ -1.38
NUP35-204ENST00000442895 CEP162Q5TB80 1403 aa6.4□□□□□ -1.39
NUP35-204ENST00000442895 AQRO60306 1485 aaKnown RBP eCLIP6.4□□□□□ -1.399e-6■□□□□ 10.2
NUP35-204ENST00000442895 SAMD9Q5K651 1589 aa6.4□□□□□ -1.39
NUP35-204ENST00000442895 STK25O00506 426 aa6.39□□□□□ -1.39
NUP35-204ENST00000442895 RYDENQ9NUL5 291 aaKnown RBP6.39□□□□□ -1.39
NUP35-204ENST00000442895 TDRD9Q8NDG6 1382 aaKnown RBP6.39□□□□□ -1.39
NUP35-204ENST00000442895 TNIKQ9UKE5 1360 aa6.39□□□□□ -1.39
NUP35-204ENST00000442895 ARAP1Q96P48 1450 aa6.39□□□□□ -1.39
NUP35-204ENST00000442895 NKX1-1Q15270 411 aaPredicted RBP6.38□□□□□ -1.39
NUP35-204ENST00000442895 TMEM132AQ24JP5 1023 aa6.38□□□□□ -1.39
NUP35-204ENST00000442895 RNF25Q96BH1 459 aaPredicted RBP6.38□□□□□ -1.39
NUP35-204ENST00000442895 CEP170Q5SW79 1584 aa6.38□□□□□ -1.39
NUP35-204ENST00000442895 SNAPC4Q5SXM2 1469 aa6.37□□□□□ -1.39
NUP35-204ENST00000442895 VGFO15240 615 aaPredicted RBP6.37□□□□□ -1.39
NUP35-204ENST00000442895 MRPL50Q8N5N7 158 aaKnown RBP6.37□□□□□ -1.39
NUP35-204ENST00000442895 CFAP43Q8NDM7 1665 aa6.36□□□□□ -1.39
NUP35-204ENST00000442895 MS4A4AQ96JQ5 239 aa6.36□□□□□ -1.39
NUP35-204ENST00000442895 ARXQ96QS3 562 aa6.36□□□□□ -1.39
NUP35-204ENST00000442895 GRIN2BQ13224 1484 aa6.35□□□□□ -1.39
NUP35-204ENST00000442895 ARHGAP35Q9NRY4 1499 aa6.35□□□□□ -1.39
NUP35-204ENST00000442895 C2orf72A6NCS6 295 aa6.35□□□□□ -1.39
NUP35-204ENST00000442895 KCNC4Q03721 635 aa6.35□□□□□ -1.39
NUP35-204ENST00000442895 NEUROD1Q13562 356 aa6.35□□□□□ -1.39
NUP35-204ENST00000442895 ERICH6BQ5W0A0 696 aa6.35□□□□□ -1.39
NUP35-204ENST00000442895 PCF11O94913 1555 aaKnown RBP6.35□□□□□ -1.39
NUP35-204ENST00000442895 CARMIL1Q5VZK9 1371 aa6.34□□□□□ -1.39
NUP35-204ENST00000442895 CLSPNQ9HAW4 1339 aa6.34□□□□□ -1.39
NUP35-204ENST00000442895 PCGF6Q9BYE7 350 aa6.34□□□□□ -1.39
NUP35-204ENST00000442895 WDR70Q9NW82 654 aa6.34□□□□□ -1.39
NUP35-204ENST00000442895 PODXL2Q9NZ53 605 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms