RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-203ENST00000432907 CCDC66A2RUB6 948 aa12.93□□□□□ -0.34
PKNOX1-203ENST00000432907 CARMIL2Q6F5E8 1435 aa12.93□□□□□ -0.34
PKNOX1-203ENST00000432907 TRAK2O60296 914 aa12.93□□□□□ -0.34
PKNOX1-203ENST00000432907 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
PKNOX1-203ENST00000432907 FOXD1Q16676 465 aa12.92□□□□□ -0.34
PKNOX1-203ENST00000432907 KIAA1211Q6ZU35 1233 aa12.92□□□□□ -0.34
PKNOX1-203ENST00000432907 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-203ENST00000432907 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
PKNOX1-203ENST00000432907 TPM4P67936 248 aa12.91□□□□□ -0.34
PKNOX1-203ENST00000432907 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
PKNOX1-203ENST00000432907 CFDP1Q9UEE9 299 aaPredicted RBP12.91□□□□□ -0.34
PKNOX1-203ENST00000432907 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
PKNOX1-203ENST00000432907 GPS2Q13227 327 aa12.9□□□□□ -0.34
PKNOX1-203ENST00000432907 NOC3LQ8WTT2 800 aaKnown RBP12.9□□□□□ -0.34
PKNOX1-203ENST00000432907 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
PKNOX1-203ENST00000432907 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
PKNOX1-203ENST00000432907 ESPNB1AK53 854 aa12.9□□□□□ -0.35
PKNOX1-203ENST00000432907 DIAPH3Q9NSV4 1193 aa12.9□□□□□ -0.35
PKNOX1-203ENST00000432907 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
PKNOX1-203ENST00000432907 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
PKNOX1-203ENST00000432907 CCDC39Q9UFE4 941 aa12.89□□□□□ -0.35
PKNOX1-203ENST00000432907 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-203ENST00000432907 PHLDB1Q86UU1 1377 aa12.88□□□□□ -0.35
PKNOX1-203ENST00000432907 FOXD4L6Q3SYB3 417 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-203ENST00000432907 FOXD4L3Q6VB84 417 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-203ENST00000432907 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
PKNOX1-203ENST00000432907 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
PKNOX1-203ENST00000432907 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
PKNOX1-203ENST00000432907 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
PKNOX1-203ENST00000432907 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
PKNOX1-203ENST00000432907 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-203ENST00000432907 HMGN5P82970 282 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-203ENST00000432907 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-203ENST00000432907 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-203ENST00000432907 CCAR2Q8N163 923 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-203ENST00000432907 MPHOSPH9Q99550 1183 aa12.86□□□□□ -0.35
PKNOX1-203ENST00000432907 GNL2Q13823 731 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-203ENST00000432907 COG6Q9Y2V7 657 aa12.85□□□□□ -0.35
PKNOX1-203ENST00000432907 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
PKNOX1-203ENST00000432907 ESF1Q9H501 851 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-203ENST00000432907 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-203ENST00000432907 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
PKNOX1-203ENST00000432907 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
PKNOX1-203ENST00000432907 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
PKNOX1-203ENST00000432907 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
PKNOX1-203ENST00000432907 UQCRHP07919 91 aa12.84□□□□□ -0.35
PKNOX1-203ENST00000432907 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
PKNOX1-203ENST00000432907 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-203ENST00000432907 C22orf23Q9BZE7 217 aa12.83□□□□□ -0.36
PKNOX1-203ENST00000432907 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
PKNOX1-203ENST00000432907 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
PKNOX1-203ENST00000432907 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
PKNOX1-203ENST00000432907 PDCL3Q9H2J4 239 aa12.83□□□□□ -0.36
PKNOX1-203ENST00000432907 ARHGAP35Q9NRY4 1499 aa12.83□□□□□ -0.36
PKNOX1-203ENST00000432907 BECN2A8MW95 431 aa12.82□□□□□ -0.36
PKNOX1-203ENST00000432907 NUCB2P80303 420 aa12.82□□□□□ -0.36
PKNOX1-203ENST00000432907 RNF214Q8ND24 703 aa12.82□□□□□ -0.36
PKNOX1-203ENST00000432907 IFT57Q9NWB7 429 aa12.82□□□□□ -0.36
PKNOX1-203ENST00000432907 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
PKNOX1-203ENST00000432907 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
PKNOX1-203ENST00000432907 RUSC2Q8N2Y8 1516 aa12.81□□□□□ -0.36
PKNOX1-203ENST00000432907 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
PKNOX1-203ENST00000432907 PKD2Q13563 968 aa12.81□□□□□ -0.36
PKNOX1-203ENST00000432907 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-203ENST00000432907 IGF1RP08069 1367 aa12.81□□□□□ -0.36
PKNOX1-203ENST00000432907 ARGLU1Q9NWB6 273 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-203ENST00000432907 BCL2L13Q9BXK5 485 aa12.8□□□□□ -0.36
PKNOX1-203ENST00000432907 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
PKNOX1-203ENST00000432907 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
PKNOX1-203ENST00000432907 NESP48681 1621 aa12.8□□□□□ -0.36
PKNOX1-203ENST00000432907 PDE4CQ08493 712 aa12.8□□□□□ -0.36
PKNOX1-203ENST00000432907 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
PKNOX1-203ENST00000432907 TPM3P06753 285 aa12.79□□□□□ -0.36
PKNOX1-203ENST00000432907 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
PKNOX1-203ENST00000432907 ANKRD45Q5TZF3 282 aa12.79□□□□□ -0.36
PKNOX1-203ENST00000432907 CAVIN1Q6NZI2 390 aaKnown RBP12.79□□□□□ -0.36
PKNOX1-203ENST00000432907 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
PKNOX1-203ENST00000432907 POGKQ9P215 609 aa12.79□□□□□ -0.36
PKNOX1-203ENST00000432907 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
PKNOX1-203ENST00000432907 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
PKNOX1-203ENST00000432907 HOMER1Q86YM7 354 aa12.78□□□□□ -0.36
PKNOX1-203ENST00000432907 E9PSI1 815 aa12.78□□□□□ -0.36
PKNOX1-203ENST00000432907 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
PKNOX1-203ENST00000432907 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
PKNOX1-203ENST00000432907 HMMRO75330 724 aa12.76□□□□□ -0.37
PKNOX1-203ENST00000432907 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 MNS1Q8NEH6 495 aa12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 MCM4P33991 863 aa12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
PKNOX1-203ENST00000432907 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
PKNOX1-203ENST00000432907 IFT140Q96RY7 1462 aa12.74□□□□□ -0.37
PKNOX1-203ENST00000432907 GRIN2BQ13224 1484 aa12.73□□□□□ -0.37
PKNOX1-203ENST00000432907 CHMP3Q9Y3E7 222 aa12.73□□□□□ -0.37
PKNOX1-203ENST00000432907 CUX1P39880 1505 aa12.73□□□□□ -0.37
PKNOX1-203ENST00000432907 ST20-MTHFSA0A0A6YYL1 179 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms