RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 VGFO15240 615 aaPredicted RBP17.61■□□□□ 0.41
DENND3-202ENST00000424248 PLCB2Q00722 1185 aa17.61■□□□□ 0.41
DENND3-202ENST00000424248 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
DENND3-202ENST00000424248 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
DENND3-202ENST00000424248 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.6■□□□□ 0.41
DENND3-202ENST00000424248 SPRYD3Q8NCJ5 442 aa17.59■□□□□ 0.41
DENND3-202ENST00000424248 PANK3Q9H999 370 aa17.59■□□□□ 0.41
DENND3-202ENST00000424248 CENPJQ9HC77 1338 aaPredicted RBP17.59■□□□□ 0.41
DENND3-202ENST00000424248 FYCO1Q9BQS8 1478 aa17.59■□□□□ 0.41
DENND3-202ENST00000424248 DDX11L8A8MPP1 907 aa17.59■□□□□ 0.41
DENND3-202ENST00000424248 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
DENND3-202ENST00000424248 NGEFQ8N5V2 710 aa17.58■□□□□ 0.41
DENND3-202ENST00000424248 SYAP1Q96A49 352 aaPredicted RBP17.58■□□□□ 0.41
DENND3-202ENST00000424248 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.4
DENND3-202ENST00000424248 HDAC5Q9UQL6 1122 aa17.58■□□□□ 0.4
DENND3-202ENST00000424248 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
DENND3-202ENST00000424248 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
DENND3-202ENST00000424248 STK31Q9BXU1 1019 aa17.56■□□□□ 0.4
DENND3-202ENST00000424248 GOLGA6L4A6NEF3 574 aa17.56■□□□□ 0.4
DENND3-202ENST00000424248 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
DENND3-202ENST00000424248 CGNL1Q0VF96 1302 aa17.56■□□□□ 0.4
DENND3-202ENST00000424248 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
DENND3-202ENST00000424248 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
DENND3-202ENST00000424248 RRBP1Q9P2E9 1410 aaKnown RBP17.54■□□□□ 0.4
DENND3-202ENST00000424248 EVC2Q86UK5 1308 aa17.54■□□□□ 0.4
DENND3-202ENST00000424248 HMMRO75330 724 aa17.53■□□□□ 0.4
DENND3-202ENST00000424248 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
DENND3-202ENST00000424248 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
DENND3-202ENST00000424248 NCOA2Q15596 1464 aa17.53■□□□□ 0.4
DENND3-202ENST00000424248 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
DENND3-202ENST00000424248 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.4
DENND3-202ENST00000424248 CCDC146Q8IYE0 955 aa17.52■□□□□ 0.39
DENND3-202ENST00000424248 MFAP1P55081 439 aaKnown RBP17.51■□□□□ 0.39
DENND3-202ENST00000424248 HSP90AA2PQ14568 343 aaPredicted RBP17.51■□□□□ 0.39
DENND3-202ENST00000424248 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
DENND3-202ENST00000424248 NPHP1O15259 732 aa17.51■□□□□ 0.39
DENND3-202ENST00000424248 PRXQ9BXM0 1461 aa17.51■□□□□ 0.39
DENND3-202ENST00000424248 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
DENND3-202ENST00000424248 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
DENND3-202ENST00000424248 ANKRD50Q9ULJ7 1429 aa17.5■□□□□ 0.39
DENND3-202ENST00000424248 E9PSI1 815 aa17.5■□□□□ 0.39
DENND3-202ENST00000424248 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
DENND3-202ENST00000424248 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
DENND3-202ENST00000424248 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
DENND3-202ENST00000424248 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.39
DENND3-202ENST00000424248 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
DENND3-202ENST00000424248 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
DENND3-202ENST00000424248 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
DENND3-202ENST00000424248 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
DENND3-202ENST00000424248 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
DENND3-202ENST00000424248 AAMPQ13685 434 aa17.46■□□□□ 0.39
DENND3-202ENST00000424248 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.39
DENND3-202ENST00000424248 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
DENND3-202ENST00000424248 APBB1O00213 710 aa17.45■□□□□ 0.38
DENND3-202ENST00000424248 AMPHP49418 695 aa17.45■□□□□ 0.38
DENND3-202ENST00000424248 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
DENND3-202ENST00000424248 CLUAP1Q96AJ1 413 aa17.45■□□□□ 0.38
DENND3-202ENST00000424248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.43■□□□□ 0.38
DENND3-202ENST00000424248 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
DENND3-202ENST00000424248 PHF14O94880 888 aa17.43■□□□□ 0.38
DENND3-202ENST00000424248 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
DENND3-202ENST00000424248 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
DENND3-202ENST00000424248 COG3Q96JB2 828 aa17.42■□□□□ 0.38
DENND3-202ENST00000424248 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
DENND3-202ENST00000424248 CSPP1Q1MSJ5 1256 aa17.41■□□□□ 0.38
DENND3-202ENST00000424248 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
DENND3-202ENST00000424248 ST18O60284 1047 aa17.41■□□□□ 0.38
DENND3-202ENST00000424248 WASHC2AQ641Q2 1341 aa17.4■□□□□ 0.38
DENND3-202ENST00000424248 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
DENND3-202ENST00000424248 PLIN1O60240 522 aa17.4■□□□□ 0.38
DENND3-202ENST00000424248 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
DENND3-202ENST00000424248 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
DENND3-202ENST00000424248 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
DENND3-202ENST00000424248 NFKBIBQ15653 356 aa17.39■□□□□ 0.37
DENND3-202ENST00000424248 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
DENND3-202ENST00000424248 EHBP1L1Q8N3D4 1523 aa17.38■□□□□ 0.37
DENND3-202ENST00000424248 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
DENND3-202ENST00000424248 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
DENND3-202ENST00000424248 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
DENND3-202ENST00000424248 APAF1O14727 1248 aa17.37■□□□□ 0.37
DENND3-202ENST00000424248 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
DENND3-202ENST00000424248 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
DENND3-202ENST00000424248 SLC4A10Q6U841 1118 aa17.36■□□□□ 0.37
DENND3-202ENST00000424248 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
DENND3-202ENST00000424248 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
DENND3-202ENST00000424248 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
DENND3-202ENST00000424248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.34■□□□□ 0.37
DENND3-202ENST00000424248 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
DENND3-202ENST00000424248 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.37
DENND3-202ENST00000424248 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.37
DENND3-202ENST00000424248 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.36
DENND3-202ENST00000424248 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
DENND3-202ENST00000424248 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
DENND3-202ENST00000424248 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
DENND3-202ENST00000424248 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
DENND3-202ENST00000424248 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
DENND3-202ENST00000424248 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
DENND3-202ENST00000424248 COG6Q9Y2V7 657 aa17.31■□□□□ 0.36
DENND3-202ENST00000424248 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
DENND3-202ENST00000424248 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms