RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
BDNF-208ENST00000418212 FGD1P98174 961 aa16.82■□□□□ 0.28
BDNF-208ENST00000418212 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
BDNF-208ENST00000418212 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
BDNF-208ENST00000418212 AMPHP49418 695 aa16.81■□□□□ 0.28
BDNF-208ENST00000418212 KIF7Q2M1P5 1343 aa16.81■□□□□ 0.28
BDNF-208ENST00000418212 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
BDNF-208ENST00000418212 SLC4A10Q6U841 1118 aa16.81■□□□□ 0.28
BDNF-208ENST00000418212 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
BDNF-208ENST00000418212 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
BDNF-208ENST00000418212 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
BDNF-208ENST00000418212 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
BDNF-208ENST00000418212 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
BDNF-208ENST00000418212 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
BDNF-208ENST00000418212 CASKIN1Q8WXD9 1431 aa16.78■□□□□ 0.28
BDNF-208ENST00000418212 PDE3BQ13370 1112 aa16.77■□□□□ 0.27
BDNF-208ENST00000418212 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.27
BDNF-208ENST00000418212 RWDD1Q9H446 243 aaPredicted RBP16.77■□□□□ 0.27
BDNF-208ENST00000418212 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
BDNF-208ENST00000418212 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
BDNF-208ENST00000418212 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
BDNF-208ENST00000418212 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
BDNF-208ENST00000418212 EXOC6Q8TAG9 804 aa16.76■□□□□ 0.27
BDNF-208ENST00000418212 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
BDNF-208ENST00000418212 CUX1P39880 1505 aa16.75■□□□□ 0.27
BDNF-208ENST00000418212 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
BDNF-208ENST00000418212 IL27Q8NEV9 243 aa16.75■□□□□ 0.27
BDNF-208ENST00000418212 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
BDNF-208ENST00000418212 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
BDNF-208ENST00000418212 EVC2Q86UK5 1308 aa16.74■□□□□ 0.27
BDNF-208ENST00000418212 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
BDNF-208ENST00000418212 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
BDNF-208ENST00000418212 NBPF8Q3BBV2 869 aa16.73■□□□□ 0.27
BDNF-208ENST00000418212 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
BDNF-208ENST00000418212 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
BDNF-208ENST00000418212 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
BDNF-208ENST00000418212 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
BDNF-208ENST00000418212 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
BDNF-208ENST00000418212 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
BDNF-208ENST00000418212 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
BDNF-208ENST00000418212 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.26
BDNF-208ENST00000418212 PTMAP06454 111 aaKnown RBP16.7■□□□□ 0.26
BDNF-208ENST00000418212 COG3Q96JB2 828 aa16.7■□□□□ 0.26
BDNF-208ENST00000418212 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
BDNF-208ENST00000418212 CC2D2AQ9P2K1 1620 aa16.69■□□□□ 0.26
BDNF-208ENST00000418212 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
BDNF-208ENST00000418212 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
BDNF-208ENST00000418212 ZRSR1Q15695 479 aaKnown RBP16.68■□□□□ 0.26
BDNF-208ENST00000418212 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
BDNF-208ENST00000418212 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
BDNF-208ENST00000418212 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
BDNF-208ENST00000418212 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
BDNF-208ENST00000418212 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
BDNF-208ENST00000418212 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
BDNF-208ENST00000418212 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
BDNF-208ENST00000418212 RAPGEF3O95398 923 aa16.65■□□□□ 0.26
BDNF-208ENST00000418212 GZF1Q9H116 711 aaPredicted RBP16.65■□□□□ 0.26
BDNF-208ENST00000418212 TULP1O00294 542 aaPredicted RBP16.64■□□□□ 0.25
BDNF-208ENST00000418212 HMOX1P09601 288 aa16.64■□□□□ 0.25
BDNF-208ENST00000418212 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
BDNF-208ENST00000418212 PKNOX2Q96KN3 472 aa16.64■□□□□ 0.25
BDNF-208ENST00000418212 IPO9Q96P70 1041 aaKnown RBP16.64■□□□□ 0.25
BDNF-208ENST00000418212 SLC4A3P48751 1232 aa16.63■□□□□ 0.25
BDNF-208ENST00000418212 TRIM6-TRIM34B2RNG4 842 aa16.63■□□□□ 0.25
BDNF-208ENST00000418212 ADAMTS8Q9UP79 889 aa16.63■□□□□ 0.25
BDNF-208ENST00000418212 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
BDNF-208ENST00000418212 E9PSI1 815 aa16.63■□□□□ 0.25
BDNF-208ENST00000418212 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
BDNF-208ENST00000418212 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
BDNF-208ENST00000418212 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
BDNF-208ENST00000418212 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
BDNF-208ENST00000418212 RIPK4P57078 832 aa16.62■□□□□ 0.25
BDNF-208ENST00000418212 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
BDNF-208ENST00000418212 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
BDNF-208ENST00000418212 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
BDNF-208ENST00000418212 MCCP23508 829 aa16.6■□□□□ 0.25
BDNF-208ENST00000418212 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
BDNF-208ENST00000418212 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
BDNF-208ENST00000418212 MTHFSP49914 203 aa16.6■□□□□ 0.25
BDNF-208ENST00000418212 DNTTIP2Q5QJE6 756 aaKnown RBP16.6■□□□□ 0.25
BDNF-208ENST00000418212 SLC12A5Q9H2X9 1139 aa16.6■□□□□ 0.25
BDNF-208ENST00000418212 ARHGAP5Q13017 1502 aa16.59■□□□□ 0.25
BDNF-208ENST00000418212 GOLGA6L4A6NEF3 574 aa16.59■□□□□ 0.25
BDNF-208ENST00000418212 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
BDNF-208ENST00000418212 ZKSCAN2Q63HK3 967 aa16.58■□□□□ 0.25
BDNF-208ENST00000418212 NGEFQ8N5V2 710 aa16.58■□□□□ 0.24
BDNF-208ENST00000418212 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
BDNF-208ENST00000418212 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.24
BDNF-208ENST00000418212 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
BDNF-208ENST00000418212 HMMRO75330 724 aa16.57■□□□□ 0.24
BDNF-208ENST00000418212 PDE4AP27815 886 aa16.57■□□□□ 0.24
BDNF-208ENST00000418212 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
BDNF-208ENST00000418212 TEFQ10587 303 aa16.56■□□□□ 0.24
BDNF-208ENST00000418212 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
BDNF-208ENST00000418212 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
BDNF-208ENST00000418212 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
BDNF-208ENST00000418212 C9orf84Q5VXU9 1444 aa16.55■□□□□ 0.24
BDNF-208ENST00000418212 CNTLNQ9NXG0 1405 aa16.55■□□□□ 0.24
BDNF-208ENST00000418212 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
BDNF-208ENST00000418212 PSME1Q06323 249 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms