RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
NUP58-202ENST00000381736 DNMT1P26358 1616 aaKnown RBP15.22■□□□□ 0.03
NUP58-202ENST00000381736 ZNF518AQ6AHZ1 1483 aa15.21■□□□□ 0.03
NUP58-202ENST00000381736 USP47Q96K76 1375 aa15.2■□□□□ 0.02
NUP58-202ENST00000381736 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
NUP58-202ENST00000381736 SHANK2Q9UPX8 1470 aa15.19■□□□□ 0.02
NUP58-202ENST00000381736 ZCCHC11Q5TAX3 1644 aaKnown RBP15.19■□□□□ 0.02
NUP58-202ENST00000381736 EID1Q9Y6B2 187 aa15.19■□□□□ 0.02
NUP58-202ENST00000381736 SRPK2P78362 688 aaKnown RBP15.19■□□□□ 0.02
NUP58-202ENST00000381736 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
NUP58-202ENST00000381736 EIF3AQ14152 1382 aaKnown RBP15.18■□□□□ 0.02
NUP58-202ENST00000381736 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
NUP58-202ENST00000381736 TEX14Q8IWB6 1497 aa15.18■□□□□ 0.02
NUP58-202ENST00000381736 DUOX2Q9NRD8 1548 aa15.17■□□□□ 0.02
NUP58-202ENST00000381736 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
NUP58-202ENST00000381736 NEFMP07197 916 aa15.16■□□□□ 0.02
NUP58-202ENST00000381736 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
NUP58-202ENST00000381736 SALL2Q9Y467 1007 aaPredicted RBP15.16■□□□□ 0.02
NUP58-202ENST00000381736 TTC37Q6PGP7 1564 aa15.14■□□□□ 0.01
NUP58-202ENST00000381736 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
NUP58-202ENST00000381736 MAPKBP1O60336 1514 aa15.14■□□□□ 0.01
NUP58-202ENST00000381736 ERBINQ96RT1 1412 aa15.14■□□□□ 0.01
NUP58-202ENST00000381736 MYO5CQ9NQX4 1742 aa15.14■□□□□ 0.01
NUP58-202ENST00000381736 SLC52A1Q9NWF4 448 aa15.13■□□□□ 0.01
NUP58-202ENST00000381736 A2MP01023 1474 aa15.13■□□□□ 0.01
NUP58-202ENST00000381736 SHROOM2Q13796 1616 aa15.13■□□□□ 0.01
NUP58-202ENST00000381736 RTEL1-TNFRSF6BF6WH68 1400 aa15.13■□□□□ 0.01
NUP58-202ENST00000381736 ADGRL2O95490 1459 aa15.13■□□□□ 0.01
NUP58-202ENST00000381736 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
NUP58-202ENST00000381736 NBPF1Q3BBV0 1214 aa15.12■□□□□ 0.01
NUP58-202ENST00000381736 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
NUP58-202ENST00000381736 RPRD2Q5VT52 1461 aaKnown RBP15.1■□□□□ 0.01
NUP58-202ENST00000381736 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
NUP58-202ENST00000381736 POGZQ7Z3K3 1410 aa15.09■□□□□ 0.01
NUP58-202ENST00000381736 TMEM132EQ6IEE7 984 aa15.09■□□□□ 0.01
NUP58-202ENST00000381736 SAMD9LQ8IVG5 1584 aa15.09■□□□□ 0.01
NUP58-202ENST00000381736 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0.01
NUP58-202ENST00000381736 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
NUP58-202ENST00000381736 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.07■□□□□ 0
NUP58-202ENST00000381736 PREX2Q70Z35 1606 aa15.07■□□□□ 0
NUP58-202ENST00000381736 ADCY10Q96PN6 1610 aa15.07■□□□□ 0
NUP58-202ENST00000381736 PLEKHG5O94827 1062 aa15.07■□□□□ 0
NUP58-202ENST00000381736 FBXO31Q5XUX0 539 aaPredicted RBP15.07■□□□□ 0
NUP58-202ENST00000381736 FAM135AQ9P2D6 1515 aa15.07■□□□□ 0
NUP58-202ENST00000381736 ATP7AQ04656 1500 aa15.06■□□□□ 0
NUP58-202ENST00000381736 SENP3-EIF4A1A0A087X0R7 540 aa15.06■□□□□ 0
NUP58-202ENST00000381736 NEO1Q92859 1461 aa15.06■□□□□ 0
NUP58-202ENST00000381736 CCER2I3L3R5 266 aa15.05■□□□□ 0
NUP58-202ENST00000381736 CDC42BPAQ5VT25 1732 aa15.05■□□□□ -0
NUP58-202ENST00000381736 KIF7Q2M1P5 1343 aa15.04■□□□□ -0
NUP58-202ENST00000381736 PPM1GO15355 546 aaPredicted RBP15.04■□□□□ -0
NUP58-202ENST00000381736 IDI1Q13907 227 aa15.04■□□□□ -0
NUP58-202ENST00000381736 PZPP20742 1482 aa15.04■□□□□ -0
NUP58-202ENST00000381736 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
NUP58-202ENST00000381736 CCDC7Q96M83 1385 aa15.03■□□□□ -0
NUP58-202ENST00000381736 WASHC2AQ641Q2 1341 aa15.03■□□□□ -0
NUP58-202ENST00000381736 CFAP53Q96M91 514 aa15.03■□□□□ -0
NUP58-202ENST00000381736 CENPJQ9HC77 1338 aaPredicted RBP15.03■□□□□ -0
NUP58-202ENST00000381736 PPP6R1Q9UPN7 881 aa15.02■□□□□ -0
NUP58-202ENST00000381736 MINK1Q8N4C8 1332 aaPredicted RBP15.02■□□□□ -0
NUP58-202ENST00000381736 PANK3Q9H999 370 aa15.02□□□□□ -0.01
NUP58-202ENST00000381736 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
NUP58-202ENST00000381736 ABCC1P33527 1531 aa15.01□□□□□ -0.01
NUP58-202ENST00000381736 RPGRIP1LQ68CZ1 1315 aa15.01□□□□□ -0.01
NUP58-202ENST00000381736 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
NUP58-202ENST00000381736 GCC2Q8IWJ2 1684 aa15□□□□□ -0.01
NUP58-202ENST00000381736 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
NUP58-202ENST00000381736 TXNDC2Q86VQ3 553 aa15□□□□□ -0.01
NUP58-202ENST00000381736 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
NUP58-202ENST00000381736 ARHGEF12Q9NZN5 1544 aa15□□□□□ -0.01
NUP58-202ENST00000381736 EVC2Q86UK5 1308 aa15□□□□□ -0.01
NUP58-202ENST00000381736 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
NUP58-202ENST00000381736 RALBP1Q15311 655 aa14.99□□□□□ -0.01
NUP58-202ENST00000381736 ZBTB7CA1YPR0 619 aa14.98□□□□□ -0.01
NUP58-202ENST00000381736 LMOD2Q6P5Q4 547 aa14.98□□□□□ -0.01
NUP58-202ENST00000381736 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
NUP58-202ENST00000381736 KDM6BO15054 1643 aa14.97□□□□□ -0.01
NUP58-202ENST00000381736 THEMISQ8N1K5 641 aaPredicted RBP14.97□□□□□ -0.01
NUP58-202ENST00000381736 CFAP74Q9C0B2 1584 aa14.97□□□□□ -0.01
NUP58-202ENST00000381736 ADGRF5Q8IZF2 1346 aa14.96□□□□□ -0.01
NUP58-202ENST00000381736 PRKRIP1Q9H875 184 aaPredicted RBP14.96□□□□□ -0.01
NUP58-202ENST00000381736 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
NUP58-202ENST00000381736 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
NUP58-202ENST00000381736 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
NUP58-202ENST00000381736 TSPOAP1O95153 1857 aa14.95□□□□□ -0.02
NUP58-202ENST00000381736 CANXP27824 592 aaKnown RBP14.94□□□□□ -0.02
NUP58-202ENST00000381736 ATP10AO60312 1499 aa14.94□□□□□ -0.02
NUP58-202ENST00000381736 RTL5Q5HYW3 569 aaPredicted RBP14.94□□□□□ -0.02
NUP58-202ENST00000381736 YEATS2Q9ULM3 1422 aa14.94□□□□□ -0.02
NUP58-202ENST00000381736 SOX12O15370 315 aa14.94□□□□□ -0.02
NUP58-202ENST00000381736 CDC42BPBQ9Y5S2 1711 aa14.93□□□□□ -0.02
NUP58-202ENST00000381736 ARAP3Q8WWN8 1544 aa14.93□□□□□ -0.02
NUP58-202ENST00000381736 DAXXQ9UER7 740 aaPredicted RBP14.93□□□□□ -0.02
NUP58-202ENST00000381736 NUDCQ9Y266 331 aa14.93□□□□□ -0.02
NUP58-202ENST00000381736 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
NUP58-202ENST00000381736 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
NUP58-202ENST00000381736 PRAM1Q96QH2 718 aa14.91□□□□□ -0.02
NUP58-202ENST00000381736 NOS1P29475 1434 aa14.91□□□□□ -0.02
NUP58-202ENST00000381736 FKBP8Q14318 412 aa14.91□□□□□ -0.02
NUP58-202ENST00000381736 SLC26A8Q96RN1 970 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms