RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
PTPN20-204ENST00000374346 ST20-MTHFSA0A0A6YYL1 179 aa15.38■□□□□ 0.05
PTPN20-204ENST00000374346 BRD4O60885 1362 aaPredicted RBP15.38■□□□□ 0.05
PTPN20-204ENST00000374346 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
PTPN20-204ENST00000374346 MYBBP1AQ9BQG0 1328 aaKnown RBP15.38■□□□□ 0.05
PTPN20-204ENST00000374346 MSH5O43196 834 aa15.37■□□□□ 0.05
PTPN20-204ENST00000374346 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
PTPN20-204ENST00000374346 CCDC144AA2RUR9 1427 aa15.37■□□□□ 0.05
PTPN20-204ENST00000374346 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
PTPN20-204ENST00000374346 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
PTPN20-204ENST00000374346 E9PCH4 1651 aa15.35■□□□□ 0.05
PTPN20-204ENST00000374346 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
PTPN20-204ENST00000374346 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.05
PTPN20-204ENST00000374346 TRPM1Q7Z4N2 1603 aa15.33■□□□□ 0.04
PTPN20-204ENST00000374346 MAST1Q9Y2H9 1570 aa15.33■□□□□ 0.04
PTPN20-204ENST00000374346 PRAG1Q86YV5 1406 aa15.32■□□□□ 0.04
PTPN20-204ENST00000374346 UNC13BO14795 1591 aa15.31■□□□□ 0.04
PTPN20-204ENST00000374346 ARHGAP5Q13017 1502 aa15.3■□□□□ 0.04
PTPN20-204ENST00000374346 PLEKHH2Q8IVE3 1493 aa15.3■□□□□ 0.04
PTPN20-204ENST00000374346 NLRP13Q86W25 1043 aa15.3■□□□□ 0.04
PTPN20-204ENST00000374346 LAMC1P11047 1609 aa15.29■□□□□ 0.04
PTPN20-204ENST00000374346 SYCP2Q9BX26 1530 aa15.29■□□□□ 0.04
PTPN20-204ENST00000374346 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
PTPN20-204ENST00000374346 EIF2AK4Q9P2K8 1649 aaKnown RBP15.29■□□□□ 0.04
PTPN20-204ENST00000374346 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
PTPN20-204ENST00000374346 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
PTPN20-204ENST00000374346 PDE3BQ13370 1112 aa15.27■□□□□ 0.04
PTPN20-204ENST00000374346 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.04
PTPN20-204ENST00000374346 GPRASP1Q5JY77 1395 aa15.27■□□□□ 0.03
PTPN20-204ENST00000374346 IQGAP3Q86VI3 1631 aa15.27■□□□□ 0.03
PTPN20-204ENST00000374346 PARD3Q8TEW0 1356 aa15.26■□□□□ 0.03
PTPN20-204ENST00000374346 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
PTPN20-204ENST00000374346 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
PTPN20-204ENST00000374346 PRDM15P57071 1507 aaPredicted RBP15.24■□□□□ 0.03
PTPN20-204ENST00000374346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTPN20-204ENST00000374346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTPN20-204ENST00000374346 DUOX2Q9NRD8 1548 aa15.24■□□□□ 0.03
PTPN20-204ENST00000374346 A2MP01023 1474 aa15.23■□□□□ 0.03
PTPN20-204ENST00000374346 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
PTPN20-204ENST00000374346 ATP10AO60312 1499 aa15.22■□□□□ 0.03
PTPN20-204ENST00000374346 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
PTPN20-204ENST00000374346 CHD1O14646 1710 aa15.22■□□□□ 0.03
PTPN20-204ENST00000374346 INSRP06213 1382 aa15.22■□□□□ 0.03
PTPN20-204ENST00000374346 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
PTPN20-204ENST00000374346 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
PTPN20-204ENST00000374346 RRP1P56182 461 aaKnown RBP15.21■□□□□ 0.03
PTPN20-204ENST00000374346 TMF1P82094 1093 aa15.21■□□□□ 0.03
PTPN20-204ENST00000374346 ZMYM4Q5VZL5 1548 aa15.21■□□□□ 0.03
PTPN20-204ENST00000374346 PLA2R1Q13018 1463 aa15.21■□□□□ 0.03
PTPN20-204ENST00000374346 RCAN3Q9UKA8 241 aa15.21■□□□□ 0.02
PTPN20-204ENST00000374346 NBPF1Q3BBV0 1214 aa15.2■□□□□ 0.02
PTPN20-204ENST00000374346 ABCC2Q92887 1545 aa15.2■□□□□ 0.02
PTPN20-204ENST00000374346 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-204ENST00000374346 NOP58Q9Y2X3 529 aaKnown RBP15.2■□□□□ 0.02
PTPN20-204ENST00000374346 MAGI2Q86UL8 1455 aa15.19■□□□□ 0.02
PTPN20-204ENST00000374346 SENP3-EIF4A1A0A087X0R7 540 aa15.18■□□□□ 0.02
PTPN20-204ENST00000374346 TESK2Q96S53 571 aa15.17■□□□□ 0.02
PTPN20-204ENST00000374346 DISP3Q9P2K9 1392 aa15.16■□□□□ 0.02
PTPN20-204ENST00000374346 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
PTPN20-204ENST00000374346 EFCAB2Q5VUJ9 269 aa15.15■□□□□ 0.02
PTPN20-204ENST00000374346 PANK3Q9H999 370 aa15.15■□□□□ 0.02
PTPN20-204ENST00000374346 PLCH2O75038 1416 aa15.15■□□□□ 0.02
PTPN20-204ENST00000374346 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
PTPN20-204ENST00000374346 STAC3Q96MF2 364 aa15.14■□□□□ 0.01
PTPN20-204ENST00000374346 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
PTPN20-204ENST00000374346 BLMP54132 1417 aaPredicted RBP15.14■□□□□ 0.01
PTPN20-204ENST00000374346 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
PTPN20-204ENST00000374346 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
PTPN20-204ENST00000374346 CDCA8Q53HL2 280 aa15.13■□□□□ 0.01
PTPN20-204ENST00000374346 EXOC6Q8TAG9 804 aa15.11■□□□□ 0.01
PTPN20-204ENST00000374346 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
PTPN20-204ENST00000374346 ABCC1P33527 1531 aa15.1■□□□□ 0.01
PTPN20-204ENST00000374346 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
PTPN20-204ENST00000374346 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
PTPN20-204ENST00000374346 ZCCHC11Q5TAX3 1644 aaKnown RBP15.09■□□□□ 0.01
PTPN20-204ENST00000374346 MADDQ8WXG6 1647 aa15.08■□□□□ 0
PTPN20-204ENST00000374346 CEP152O94986 1710 aa15.07■□□□□ 0
PTPN20-204ENST00000374346 IQGAP1P46940 1657 aa15.07■□□□□ 0
PTPN20-204ENST00000374346 MS4A1P11836 297 aa15.07■□□□□ 0
PTPN20-204ENST00000374346 RTEL1-TNFRSF6BF6WH68 1400 aa15.07■□□□□ 0
PTPN20-204ENST00000374346 TRPM2O94759 1503 aa15.07■□□□□ 0
PTPN20-204ENST00000374346 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
PTPN20-204ENST00000374346 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
PTPN20-204ENST00000374346 CDCA7LQ96GN5 454 aa15.06■□□□□ 0
PTPN20-204ENST00000374346 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
PTPN20-204ENST00000374346 SLC24A1O60721 1099 aa15.06■□□□□ 0
PTPN20-204ENST00000374346 WDR43Q15061 677 aaKnown RBP eCLIP15.06■□□□□ 0
PTPN20-204ENST00000374346 EIF3AQ14152 1382 aaKnown RBP15.06■□□□□ 0
PTPN20-204ENST00000374346 SYNMO15061 1565 aa15.05■□□□□ 0
PTPN20-204ENST00000374346 ERCC6L2Q5T890 1561 aa15.05■□□□□ 0
PTPN20-204ENST00000374346 ARAP3Q8WWN8 1544 aa15.05■□□□□ 0
PTPN20-204ENST00000374346 SCAF11Q99590 1463 aaKnown RBP15.05■□□□□ -0
PTPN20-204ENST00000374346 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
PTPN20-204ENST00000374346 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
PTPN20-204ENST00000374346 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
PTPN20-204ENST00000374346 TRAPPC8Q9Y2L5 1435 aa15.04■□□□□ -0
PTPN20-204ENST00000374346 KANK1Q14678 1352 aa15.03■□□□□ -0
PTPN20-204ENST00000374346 TET3O43151 1660 aa15.02□□□□□ -0.01
PTPN20-204ENST00000374346 PTPRTO14522 1441 aa15.02□□□□□ -0.01
PTPN20-204ENST00000374346 RTL5Q5HYW3 569 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms