RNA–Protein interactions for RNA: ENST00000366496.6

NLRP3-203, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-203ENST00000366496 RRAGDQ9NQL2 400 aaPredicted RBP10.72□□□□□ -0.69
NLRP3-203ENST00000366496 KIAA0586Q9BVV6 1533 aa10.72□□□□□ -0.69
NLRP3-203ENST00000366496 GOLGA6L3A6NEY3 463 aa10.71□□□□□ -0.69
NLRP3-203ENST00000366496 PTPRKQ15262 1439 aa10.71□□□□□ -0.69
NLRP3-203ENST00000366496 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
NLRP3-203ENST00000366496 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
NLRP3-203ENST00000366496 CHD1O14646 1710 aa10.71□□□□□ -0.7
NLRP3-203ENST00000366496 TARBP1Q13395 1621 aaKnown RBP10.71□□□□□ -0.7
NLRP3-203ENST00000366496 GRIN2AQ12879 1464 aa10.71□□□□□ -0.7
NLRP3-203ENST00000366496 NAIPQ13075 1403 aa10.7□□□□□ -0.7
NLRP3-203ENST00000366496 CUL7Q14999 1698 aa10.7□□□□□ -0.7
NLRP3-203ENST00000366496 FGD1P98174 961 aa10.7□□□□□ -0.7
NLRP3-203ENST00000366496 BECN1Q14457 450 aa10.7□□□□□ -0.7
NLRP3-203ENST00000366496 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
NLRP3-203ENST00000366496 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
NLRP3-203ENST00000366496 TPM2P07951 284 aa10.7□□□□□ -0.7
NLRP3-203ENST00000366496 AAMPQ13685 434 aa10.7□□□□□ -0.7
NLRP3-203ENST00000366496 PDCL3Q9H2J4 239 aa10.69□□□□□ -0.7
NLRP3-203ENST00000366496 KIF15Q9NS87 1388 aa10.69□□□□□ -0.7
NLRP3-203ENST00000366496 HFM1A2PYH4 1435 aa10.69□□□□□ -0.7
NLRP3-203ENST00000366496 CLCN1P35523 988 aa10.69□□□□□ -0.7
NLRP3-203ENST00000366496 MAPKBP1O60336 1514 aa10.69□□□□□ -0.7
NLRP3-203ENST00000366496 ROCK2O75116 1388 aaKnown RBP10.68□□□□□ -0.7
NLRP3-203ENST00000366496 EHBP1L1Q8N3D4 1523 aa10.67□□□□□ -0.7
NLRP3-203ENST00000366496 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
NLRP3-203ENST00000366496 CALD1Q05682 793 aaKnown RBP10.67□□□□□ -0.7
NLRP3-203ENST00000366496 EXOC6Q8TAG9 804 aa10.67□□□□□ -0.7
NLRP3-203ENST00000366496 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
NLRP3-203ENST00000366496 WDR43Q15061 677 aaKnown RBP eCLIP10.66□□□□□ -0.7
NLRP3-203ENST00000366496 CCDC184Q52MB2 194 aa10.66□□□□□ -0.7
NLRP3-203ENST00000366496 KNSTRNQ9Y448 316 aa10.66□□□□□ -0.7
NLRP3-203ENST00000366496 CNTLNQ9NXG0 1405 aa10.65□□□□□ -0.7
NLRP3-203ENST00000366496 RRP1P56182 461 aaKnown RBP10.65□□□□□ -0.7
NLRP3-203ENST00000366496 ANP32BQ92688 251 aaKnown RBP10.65□□□□□ -0.7
NLRP3-203ENST00000366496 STK26Q9P289 416 aa10.65□□□□□ -0.71
NLRP3-203ENST00000366496 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
NLRP3-203ENST00000366496 CANXP27824 592 aaKnown RBP10.64□□□□□ -0.71
NLRP3-203ENST00000366496 MYH16Q9H6N6 1097 aa10.64□□□□□ -0.71
NLRP3-203ENST00000366496 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
NLRP3-203ENST00000366496 HECW1Q76N89 1606 aa10.64□□□□□ -0.71
NLRP3-203ENST00000366496 DAPK1P53355 1430 aa10.64□□□□□ -0.71
NLRP3-203ENST00000366496 POGKQ9P215 609 aa10.63□□□□□ -0.71
NLRP3-203ENST00000366496 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
NLRP3-203ENST00000366496 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
NLRP3-203ENST00000366496 RCAN3Q9UKA8 241 aa10.63□□□□□ -0.71
NLRP3-203ENST00000366496 SUPT6HQ7KZ85 1726 aaKnown RBP10.62□□□□□ -0.71
NLRP3-203ENST00000366496 USP47Q96K76 1375 aa10.62□□□□□ -0.71
NLRP3-203ENST00000366496 RGS3P49796 1198 aa10.62□□□□□ -0.71
NLRP3-203ENST00000366496 TMF1P82094 1093 aa10.62□□□□□ -0.71
NLRP3-203ENST00000366496 MAP3K1Q13233 1512 aa10.62□□□□□ -0.71
NLRP3-203ENST00000366496 KANK1Q14678 1352 aa10.62□□□□□ -0.71
NLRP3-203ENST00000366496 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
NLRP3-203ENST00000366496 CCDC144AA2RUR9 1427 aa10.61□□□□□ -0.71
NLRP3-203ENST00000366496 ABCC5O15440 1437 aa10.61□□□□□ -0.71
NLRP3-203ENST00000366496 MIA2Q96PC5 1412 aa10.61□□□□□ -0.71
NLRP3-203ENST00000366496 KIF7Q2M1P5 1343 aa10.61□□□□□ -0.71
NLRP3-203ENST00000366496 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
NLRP3-203ENST00000366496 GZF1Q9H116 711 aaPredicted RBP10.6□□□□□ -0.71
NLRP3-203ENST00000366496 SLKQ9H2G2 1235 aaPredicted RBP10.6□□□□□ -0.71
NLRP3-203ENST00000366496 UPF2Q9HAU5 1272 aaKnown RBP10.6□□□□□ -0.71
NLRP3-203ENST00000366496 PTPN23Q9H3S7 1636 aa10.6□□□□□ -0.71
NLRP3-203ENST00000366496 C9orf84Q5VXU9 1444 aa10.6□□□□□ -0.71
NLRP3-203ENST00000366496 ESPNB1AK53 854 aa10.59□□□□□ -0.71
NLRP3-203ENST00000366496 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
NLRP3-203ENST00000366496 RNF123Q5XPI4 1314 aa10.59□□□□□ -0.71
NLRP3-203ENST00000366496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.58□□□□□ -0.72
NLRP3-203ENST00000366496 TRAK1Q9UPV9 953 aa10.58□□□□□ -0.72
NLRP3-203ENST00000366496 NUP153P49790 1475 aaKnown RBP10.58□□□□□ -0.72
NLRP3-203ENST00000366496 MRE11P49959 708 aa10.58□□□□□ -0.72
NLRP3-203ENST00000366496 CENPJQ9HC77 1338 aaPredicted RBP10.57□□□□□ -0.72
NLRP3-203ENST00000366496 MSNP26038 577 aaKnown RBP10.57□□□□□ -0.72
NLRP3-203ENST00000366496 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
NLRP3-203ENST00000366496 FAM13BQ9NYF5 915 aa10.57□□□□□ -0.72
NLRP3-203ENST00000366496 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
NLRP3-203ENST00000366496 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
NLRP3-203ENST00000366496 PANK3Q9H999 370 aa10.56□□□□□ -0.72
NLRP3-203ENST00000366496 PBRM1Q86U86 1689 aa10.56□□□□□ -0.72
NLRP3-203ENST00000366496 NUP160Q12769 1436 aa10.56□□□□□ -0.72
NLRP3-203ENST00000366496 CDK11BP21127 795 aaKnown RBP10.55□□□□□ -0.72
NLRP3-203ENST00000366496 KIAA1211Q6ZU35 1233 aa10.55□□□□□ -0.72
NLRP3-203ENST00000366496 ARID3AQ99856 593 aa10.55□□□□□ -0.72
NLRP3-203ENST00000366496 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
NLRP3-203ENST00000366496 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
NLRP3-203ENST00000366496 ADAMTS12P58397 1594 aa10.55□□□□□ -0.72
NLRP3-203ENST00000366496 MTERF4Q7Z6M4 381 aaKnown RBP10.55□□□□□ -0.72
NLRP3-203ENST00000366496 CEP170Q5SW79 1584 aa10.54□□□□□ -0.72
NLRP3-203ENST00000366496 RAPGEF3O95398 923 aa10.54□□□□□ -0.72
NLRP3-203ENST00000366496 CDCA8Q53HL2 280 aa10.54□□□□□ -0.72
NLRP3-203ENST00000366496 XRCC6P12956 609 aaKnown RBP eCLIP10.54□□□□□ -0.72
NLRP3-203ENST00000366496 KTN1Q86UP2 1357 aaKnown RBP10.54□□□□□ -0.72
NLRP3-203ENST00000366496 ABCA5Q8WWZ7 1642 aa10.54□□□□□ -0.72
NLRP3-203ENST00000366496 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
NLRP3-203ENST00000366496 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.54□□□□□ -0.72
NLRP3-203ENST00000366496 NCOA1Q15788 1441 aa10.53□□□□□ -0.72
NLRP3-203ENST00000366496 CENPQQ7L2Z9 268 aaPredicted RBP10.53□□□□□ -0.72
NLRP3-203ENST00000366496 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
NLRP3-203ENST00000366496 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
NLRP3-203ENST00000366496 ATP10BO94823 1461 aa10.52□□□□□ -0.72
NLRP3-203ENST00000366496 KIAA1107Q9UPP5 1409 aa10.52□□□□□ -0.72
NLRP3-203ENST00000366496 GPATCH8Q9UKJ3 1502 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms