RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
TOP3B-201ENST00000357179 NFKBIBQ15653 356 aa19.43■□□□□ 0.7
TOP3B-201ENST00000357179 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
TOP3B-201ENST00000357179 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
TOP3B-201ENST00000357179 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
TOP3B-201ENST00000357179 RRP1P56182 461 aaKnown RBP19.41■□□□□ 0.7
TOP3B-201ENST00000357179 EXOC6Q8TAG9 804 aa19.4■□□□□ 0.7
TOP3B-201ENST00000357179 EIF4G3O43432 1585 aaKnown RBP19.39■□□□□ 0.7
TOP3B-201ENST00000357179 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.7
TOP3B-201ENST00000357179 PLB1Q6P1J6 1458 aa19.39■□□□□ 0.69
TOP3B-201ENST00000357179 TMC1Q8TDI8 760 aa19.39■□□□□ 0.69
TOP3B-201ENST00000357179 CEP170Q5SW79 1584 aa19.38■□□□□ 0.69
TOP3B-201ENST00000357179 MAGI1Q96QZ7 1491 aaPredicted RBP19.38■□□□□ 0.69
TOP3B-201ENST00000357179 E9PCH4 1651 aa19.38■□□□□ 0.69
TOP3B-201ENST00000357179 RALBP1Q15311 655 aa19.38■□□□□ 0.69
TOP3B-201ENST00000357179 CDC42BPAQ5VT25 1732 aa19.37■□□□□ 0.69
TOP3B-201ENST00000357179 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
TOP3B-201ENST00000357179 PTPRGP23470 1445 aa19.36■□□□□ 0.69
TOP3B-201ENST00000357179 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
TOP3B-201ENST00000357179 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
TOP3B-201ENST00000357179 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
TOP3B-201ENST00000357179 C9orf84Q5VXU9 1444 aa19.36■□□□□ 0.69
TOP3B-201ENST00000357179 NUP155O75694 1391 aa19.35■□□□□ 0.69
TOP3B-201ENST00000357179 CARMIL2Q6F5E8 1435 aa19.35■□□□□ 0.69
TOP3B-201ENST00000357179 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
TOP3B-201ENST00000357179 PKNOX2Q96KN3 472 aa19.35■□□□□ 0.69
TOP3B-201ENST00000357179 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
TOP3B-201ENST00000357179 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
TOP3B-201ENST00000357179 ARHGEF5Q12774 1597 aa19.31■□□□□ 0.68
TOP3B-201ENST00000357179 ABCA8O94911 1581 aa19.3■□□□□ 0.68
TOP3B-201ENST00000357179 ST20-MTHFSA0A0A6YYL1 179 aa19.29■□□□□ 0.68
TOP3B-201ENST00000357179 RCAN3Q9UKA8 241 aa19.29■□□□□ 0.68
TOP3B-201ENST00000357179 NUP160Q12769 1436 aa19.28■□□□□ 0.68
TOP3B-201ENST00000357179 PLEKHD1A6NEE1 506 aa19.28■□□□□ 0.68
TOP3B-201ENST00000357179 PDE3BQ13370 1112 aa19.28■□□□□ 0.68
TOP3B-201ENST00000357179 INSRP06213 1382 aa19.27■□□□□ 0.68
TOP3B-201ENST00000357179 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
TOP3B-201ENST00000357179 TSPY4P0CV99 314 aa19.26■□□□□ 0.67
TOP3B-201ENST00000357179 TSPY10P0CW01 314 aa19.26■□□□□ 0.67
TOP3B-201ENST00000357179 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
TOP3B-201ENST00000357179 DCAF11Q8TEB1 546 aa19.26■□□□□ 0.67
TOP3B-201ENST00000357179 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
TOP3B-201ENST00000357179 ZMYM4Q5VZL5 1548 aa19.25■□□□□ 0.67
TOP3B-201ENST00000357179 NLRP13Q86W25 1043 aa19.24■□□□□ 0.67
TOP3B-201ENST00000357179 CHMP7Q8WUX9 453 aaPredicted RBP19.24■□□□□ 0.67
TOP3B-201ENST00000357179 TRPM1Q7Z4N2 1603 aa19.24■□□□□ 0.67
TOP3B-201ENST00000357179 ATP10BO94823 1461 aa19.24■□□□□ 0.67
TOP3B-201ENST00000357179 SLC4A3P48751 1232 aa19.23■□□□□ 0.67
TOP3B-201ENST00000357179 LAMC1P11047 1609 aa19.23■□□□□ 0.67
TOP3B-201ENST00000357179 JPH4Q96JJ6 628 aa19.22■□□□□ 0.67
TOP3B-201ENST00000357179 DAXXQ9UER7 740 aaPredicted RBP19.22■□□□□ 0.67
TOP3B-201ENST00000357179 PRAG1Q86YV5 1406 aa19.22■□□□□ 0.67
TOP3B-201ENST00000357179 FAM135AQ9P2D6 1515 aa19.21■□□□□ 0.67
TOP3B-201ENST00000357179 GPRASP1Q5JY77 1395 aa19.21■□□□□ 0.67
TOP3B-201ENST00000357179 GLIPR1L2Q4G1C9 344 aa19.2■□□□□ 0.66
TOP3B-201ENST00000357179 FRAT2O75474 233 aaPredicted RBP19.2■□□□□ 0.66
TOP3B-201ENST00000357179 KDM2AQ9Y2K7 1162 aa19.2■□□□□ 0.66
TOP3B-201ENST00000357179 CCDC141Q6ZP82 1450 aa19.19■□□□□ 0.66
TOP3B-201ENST00000357179 RSPH4AQ5TD94 716 aa19.18■□□□□ 0.66
TOP3B-201ENST00000357179 SKAP1Q86WV1 359 aa19.17■□□□□ 0.66
TOP3B-201ENST00000357179 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
TOP3B-201ENST00000357179 PER1O15534 1290 aaPredicted RBP19.16■□□□□ 0.66
TOP3B-201ENST00000357179 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
TOP3B-201ENST00000357179 UNC13BO14795 1591 aa19.15■□□□□ 0.66
TOP3B-201ENST00000357179 PRDM15P57071 1507 aaPredicted RBP19.15■□□□□ 0.66
TOP3B-201ENST00000357179 PREX2Q70Z35 1606 aa19.14■□□□□ 0.66
TOP3B-201ENST00000357179 SAMD9LQ8IVG5 1584 aa19.14■□□□□ 0.65
TOP3B-201ENST00000357179 MAST1Q9Y2H9 1570 aa19.14■□□□□ 0.65
TOP3B-201ENST00000357179 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
TOP3B-201ENST00000357179 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.65
TOP3B-201ENST00000357179 EIF2AK4Q9P2K8 1649 aaKnown RBP19.13■□□□□ 0.65
TOP3B-201ENST00000357179 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.652e-6■■■■■ 28.8
TOP3B-201ENST00000357179 RRAGDQ9NQL2 400 aaPredicted RBP19.12■□□□□ 0.65
TOP3B-201ENST00000357179 CDC42BPBQ9Y5S2 1711 aa19.11■□□□□ 0.65
TOP3B-201ENST00000357179 KDM2BQ8NHM5 1336 aa19.11■□□□□ 0.65
TOP3B-201ENST00000357179 A2MP01023 1474 aa19.1■□□□□ 0.65
TOP3B-201ENST00000357179 FAM161AQ3B820 660 aa19.1■□□□□ 0.65
TOP3B-201ENST00000357179 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
TOP3B-201ENST00000357179 C8orf34Q49A92 452 aa19.09■□□□□ 0.65
TOP3B-201ENST00000357179 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
TOP3B-201ENST00000357179 ZMYND15Q9H091 742 aa19.08■□□□□ 0.65
TOP3B-201ENST00000357179 IQGAP3Q86VI3 1631 aa19.08■□□□□ 0.64
TOP3B-201ENST00000357179 PLIN1O60240 522 aa19.07■□□□□ 0.64
TOP3B-201ENST00000357179 ATP10AO60312 1499 aa19.07■□□□□ 0.64
TOP3B-201ENST00000357179 TESK2Q96S53 571 aa19.07■□□□□ 0.64
TOP3B-201ENST00000357179 FBLN2P98095 1184 aa19.07■□□□□ 0.64
TOP3B-201ENST00000357179 ERBINQ96RT1 1412 aa19.06■□□□□ 0.64
TOP3B-201ENST00000357179 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
TOP3B-201ENST00000357179 NBPF1Q3BBV0 1214 aa19.05■□□□□ 0.64
TOP3B-201ENST00000357179 VSIG10Q8N0Z9 540 aa19.05■□□□□ 0.64
TOP3B-201ENST00000357179 DISP3Q9P2K9 1392 aa19.04■□□□□ 0.64
TOP3B-201ENST00000357179 CDCA7LQ96GN5 454 aa19.04■□□□□ 0.64
TOP3B-201ENST00000357179 ERCC6Q03468 1493 aa19.04■□□□□ 0.64
TOP3B-201ENST00000357179 CENPQQ7L2Z9 268 aaPredicted RBP19.04■□□□□ 0.64
TOP3B-201ENST00000357179 MYO5CQ9NQX4 1742 aa19.04■□□□□ 0.64
TOP3B-201ENST00000357179 L1TD1Q5T7N2 865 aaKnown RBP19.03■□□□□ 0.64
TOP3B-201ENST00000357179 POGKQ9P215 609 aa19.03■□□□□ 0.64
TOP3B-201ENST00000357179 RNF17Q9BXT8 1623 aaKnown RBP19.02■□□□□ 0.64
TOP3B-201ENST00000357179 TMF1P82094 1093 aa19.02■□□□□ 0.63
TOP3B-201ENST00000357179 MAGI2Q86UL8 1455 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms