RNA–Protein interactions for RNA: ENST00000354955.4

FMOD-201, Transcript of fibromodulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FMOD, Length 3,310 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMOD-201ENST00000354955 USP35Q9P2H5 1018 aa11.15□□□□□ -0.62
FMOD-201ENST00000354955 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
FMOD-201ENST00000354955 PANK2Q9BZ23 570 aa11.14□□□□□ -0.63
FMOD-201ENST00000354955 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
FMOD-201ENST00000354955 HSP90AA1P07900 732 aaKnown RBP11.14□□□□□ -0.63
FMOD-201ENST00000354955 TMF1P82094 1093 aa11.14□□□□□ -0.63
FMOD-201ENST00000354955 C8orf34Q49A92 452 aa11.14□□□□□ -0.63
FMOD-201ENST00000354955 MS4A1P11836 297 aa11.13□□□□□ -0.63
FMOD-201ENST00000354955 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
FMOD-201ENST00000354955 RNF123Q5XPI4 1314 aa11.13□□□□□ -0.63
FMOD-201ENST00000354955 RPRD2Q5VT52 1461 aaKnown RBP11.12□□□□□ -0.63
FMOD-201ENST00000354955 ABCC5O15440 1437 aa11.12□□□□□ -0.63
FMOD-201ENST00000354955 CENPQQ7L2Z9 268 aaPredicted RBP11.12□□□□□ -0.63
FMOD-201ENST00000354955 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
FMOD-201ENST00000354955 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
FMOD-201ENST00000354955 DAPK1P53355 1430 aa11.11□□□□□ -0.63
FMOD-201ENST00000354955 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
FMOD-201ENST00000354955 DISP3Q9P2K9 1392 aa11.1□□□□□ -0.63
FMOD-201ENST00000354955 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
FMOD-201ENST00000354955 SPATA31E1Q6ZUB1 1445 aa11.1□□□□□ -0.63
FMOD-201ENST00000354955 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
FMOD-201ENST00000354955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.09□□□□□ -0.63
FMOD-201ENST00000354955 NCLP19338 710 aaKnown RBP11.09□□□□□ -0.63
FMOD-201ENST00000354955 DUSP27Q5VZP5 1158 aa11.09□□□□□ -0.63
FMOD-201ENST00000354955 APBB1O00213 710 aa11.09□□□□□ -0.63
FMOD-201ENST00000354955 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
FMOD-201ENST00000354955 RRAGDQ9NQL2 400 aaPredicted RBP11.09□□□□□ -0.63
FMOD-201ENST00000354955 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
FMOD-201ENST00000354955 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
FMOD-201ENST00000354955 U2SURPO15042 1029 aaKnown RBP11.08□□□□□ -0.64
FMOD-201ENST00000354955 BECN1Q14457 450 aa11.08□□□□□ -0.64
FMOD-201ENST00000354955 PLEKHH1Q9ULM0 1364 aa11.08□□□□□ -0.64
FMOD-201ENST00000354955 ANKRD50Q9ULJ7 1429 aa11.08□□□□□ -0.64
FMOD-201ENST00000354955 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
FMOD-201ENST00000354955 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
FMOD-201ENST00000354955 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
FMOD-201ENST00000354955 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
FMOD-201ENST00000354955 PER1O15534 1290 aaPredicted RBP11.07□□□□□ -0.64
FMOD-201ENST00000354955 ANKRD30AQ9BXX3 1397 aa11.07□□□□□ -0.64
FMOD-201ENST00000354955 FTSJ3Q8IY81 847 aaKnown RBP11.07□□□□□ -0.64
FMOD-201ENST00000354955 EFCAB5A4FU69 1503 aa11.06□□□□□ -0.64
FMOD-201ENST00000354955 FOXD4L5Q5VV16 416 aaPredicted RBP11.06□□□□□ -0.64
FMOD-201ENST00000354955 FOXD4L4Q8WXT5 416 aaPredicted RBP11.06□□□□□ -0.64
FMOD-201ENST00000354955 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
FMOD-201ENST00000354955 TSR2Q969E8 191 aaKnown RBP11.06□□□□□ -0.64
FMOD-201ENST00000354955 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
FMOD-201ENST00000354955 TEX14Q8IWB6 1497 aa11.05□□□□□ -0.64
FMOD-201ENST00000354955 SUPT6HQ7KZ85 1726 aaKnown RBP11.05□□□□□ -0.64
FMOD-201ENST00000354955 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
FMOD-201ENST00000354955 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
FMOD-201ENST00000354955 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
FMOD-201ENST00000354955 MPNDQ8N594 471 aa11.04□□□□□ -0.64
FMOD-201ENST00000354955 CENPJQ9HC77 1338 aaPredicted RBP11.04□□□□□ -0.64
FMOD-201ENST00000354955 TRAK1Q9UPV9 953 aa11.04□□□□□ -0.64
FMOD-201ENST00000354955 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
FMOD-201ENST00000354955 HMGXB3Q12766 1538 aa11.03□□□□□ -0.64
FMOD-201ENST00000354955 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
FMOD-201ENST00000354955 ITPRIPQ8IWB1 547 aa11.03□□□□□ -0.64
FMOD-201ENST00000354955 GRIN2BQ13224 1484 aa11.03□□□□□ -0.64
FMOD-201ENST00000354955 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
FMOD-201ENST00000354955 RLBP1P12271 317 aa11.03□□□□□ -0.64
FMOD-201ENST00000354955 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.64
FMOD-201ENST00000354955 BCORL1Q5H9F3 1711 aa11.03□□□□□ -0.64
FMOD-201ENST00000354955 PDZRN3Q9UPQ7 1066 aa11.02□□□□□ -0.64
FMOD-201ENST00000354955 JPH4Q96JJ6 628 aa11.02□□□□□ -0.65
FMOD-201ENST00000354955 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.65
FMOD-201ENST00000354955 CCDC144AA2RUR9 1427 aa11.02□□□□□ -0.65
FMOD-201ENST00000354955 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 TMEM132EQ6IEE7 984 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
FMOD-201ENST00000354955 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 MORC1Q86VD1 984 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 C1orf115Q9H7X2 142 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 PLB1Q6P1J6 1458 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 EHBP1L1Q8N3D4 1523 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 UGGT2Q9NYU1 1516 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 SLFN5Q08AF3 891 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 STK26Q9P289 416 aa11.01□□□□□ -0.65
FMOD-201ENST00000354955 LRPPRCP42704 1394 aaKnown RBP11□□□□□ -0.65
FMOD-201ENST00000354955 SLC24A1O60721 1099 aa11□□□□□ -0.65
FMOD-201ENST00000354955 FBLN1P23142 703 aa11□□□□□ -0.65
FMOD-201ENST00000354955 TESK2Q96S53 571 aa11□□□□□ -0.65
FMOD-201ENST00000354955 XRCC6P12956 609 aaKnown RBP eCLIP10.99□□□□□ -0.65
FMOD-201ENST00000354955 SLC12A5Q9H2X9 1139 aa10.99□□□□□ -0.65
FMOD-201ENST00000354955 MIA2Q96PC5 1412 aa10.99□□□□□ -0.65
FMOD-201ENST00000354955 KDM2BQ8NHM5 1336 aa10.99□□□□□ -0.65
FMOD-201ENST00000354955 RBM10P98175 930 aaKnown RBP10.99□□□□□ -0.65
FMOD-201ENST00000354955 PZPP20742 1482 aa10.98□□□□□ -0.65
FMOD-201ENST00000354955 HSP90AB1P08238 724 aaKnown RBP10.98□□□□□ -0.65
FMOD-201ENST00000354955 NOL8Q76FK4 1167 aaKnown RBP10.98□□□□□ -0.65
FMOD-201ENST00000354955 ABCA10Q8WWZ4 1543 aa10.98□□□□□ -0.65
FMOD-201ENST00000354955 A0A0U1RQG5 324 aaPredicted RBP10.98□□□□□ -0.65
FMOD-201ENST00000354955 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
FMOD-201ENST00000354955 SMC4Q9NTJ3 1288 aa10.98□□□□□ -0.65
FMOD-201ENST00000354955 HSP90AA2PQ14568 343 aaPredicted RBP10.97□□□□□ -0.65
FMOD-201ENST00000354955 TRAK2O60296 914 aa10.97□□□□□ -0.65
FMOD-201ENST00000354955 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
FMOD-201ENST00000354955 RSPH6AQ9H0K4 717 aa10.97□□□□□ -0.65
FMOD-201ENST00000354955 AFAP1Q8N556 730 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms