RNA–Protein interactions for RNA: ENST00000350902.9

GRIN1-201, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIN1, Length 4,465 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-201ENST00000350902 ADAMTS8Q9UP79 889 aa19.77■□□□□ 0.76
GRIN1-201ENST00000350902 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
GRIN1-201ENST00000350902 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
GRIN1-201ENST00000350902 NBPF1Q3BBV0 1214 aa19.76■□□□□ 0.75
GRIN1-201ENST00000350902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
GRIN1-201ENST00000350902 MAPK8IP3Q9UPT6 1336 aa19.74■□□□□ 0.75
GRIN1-201ENST00000350902 HDGFP51858 240 aaKnown RBP19.74■□□□□ 0.75
GRIN1-201ENST00000350902 KIF3BO15066 747 aa19.73■□□□□ 0.75
GRIN1-201ENST00000350902 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
GRIN1-201ENST00000350902 HAP1P54257 671 aaPredicted RBP19.73■□□□□ 0.75
GRIN1-201ENST00000350902 MFAP1P55081 439 aaKnown RBP19.73■□□□□ 0.75
GRIN1-201ENST00000350902 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
GRIN1-201ENST00000350902 TPRNQ4KMQ1 711 aa19.72■□□□□ 0.75
GRIN1-201ENST00000350902 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
GRIN1-201ENST00000350902 L1TD1Q5T7N2 865 aaKnown RBP19.72■□□□□ 0.75
GRIN1-201ENST00000350902 SOX12O15370 315 aa19.72■□□□□ 0.75
GRIN1-201ENST00000350902 NCOA1Q15788 1441 aa19.72■□□□□ 0.75
GRIN1-201ENST00000350902 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
GRIN1-201ENST00000350902 PRKCSHP14314 528 aaPredicted RBP19.71■□□□□ 0.75
GRIN1-201ENST00000350902 C20orf194Q5TEA3 1177 aa19.71■□□□□ 0.75
GRIN1-201ENST00000350902 HSP90AB1P08238 724 aaKnown RBP19.7■□□□□ 0.74
GRIN1-201ENST00000350902 SRPK2P78362 688 aaKnown RBP19.7■□□□□ 0.74
GRIN1-201ENST00000350902 SPAG9O60271 1321 aaKnown RBP19.69■□□□□ 0.74
GRIN1-201ENST00000350902 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
GRIN1-201ENST00000350902 MAP3K1Q13233 1512 aa19.68■□□□□ 0.74
GRIN1-201ENST00000350902 PNNQ9H307 717 aaKnown RBP19.68■□□□□ 0.74
GRIN1-201ENST00000350902 ANKRD30BQ9BXX2 1392 aa19.68■□□□□ 0.74
GRIN1-201ENST00000350902 HSCBQ8IWL3 235 aa19.68■□□□□ 0.74
GRIN1-201ENST00000350902 CCDC144AA2RUR9 1427 aa19.67■□□□□ 0.74
GRIN1-201ENST00000350902 FOXD4L1Q9NU39 408 aa19.66■□□□□ 0.74
GRIN1-201ENST00000350902 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
GRIN1-201ENST00000350902 PTPRGP23470 1445 aa19.65■□□□□ 0.74
GRIN1-201ENST00000350902 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
GRIN1-201ENST00000350902 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
GRIN1-201ENST00000350902 NESP48681 1621 aa19.65■□□□□ 0.74
GRIN1-201ENST00000350902 PANK1Q8TE04 598 aa19.65■□□□□ 0.74
GRIN1-201ENST00000350902 GOLGA6L3A6NEY3 463 aa19.65■□□□□ 0.74
GRIN1-201ENST00000350902 STK26Q9P289 416 aa19.65■□□□□ 0.74
GRIN1-201ENST00000350902 GOLGA6L22H0YM25 854 aa19.64■□□□□ 0.73
GRIN1-201ENST00000350902 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
GRIN1-201ENST00000350902 TAOK2Q9UL54 1235 aa19.63■□□□□ 0.73
GRIN1-201ENST00000350902 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
GRIN1-201ENST00000350902 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
GRIN1-201ENST00000350902 ITPRIPQ8IWB1 547 aa19.62■□□□□ 0.73
GRIN1-201ENST00000350902 RWDD1Q9H446 243 aaPredicted RBP19.62■□□□□ 0.73
GRIN1-201ENST00000350902 BCAR3O75815 825 aa19.62■□□□□ 0.73
GRIN1-201ENST00000350902 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
GRIN1-201ENST00000350902 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
GRIN1-201ENST00000350902 CDK13Q14004 1512 aaKnown RBP19.6■□□□□ 0.73
GRIN1-201ENST00000350902 PMFBP1Q8TBY8 1022 aa19.58■□□□□ 0.72
GRIN1-201ENST00000350902 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
GRIN1-201ENST00000350902 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
GRIN1-201ENST00000350902 KIAA1107Q9UPP5 1409 aa19.56■□□□□ 0.72
GRIN1-201ENST00000350902 ARID3AQ99856 593 aa19.56■□□□□ 0.72
GRIN1-201ENST00000350902 E9PSI1 815 aa19.56■□□□□ 0.72
GRIN1-201ENST00000350902 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
GRIN1-201ENST00000350902 DAPK1P53355 1430 aa19.56■□□□□ 0.72
GRIN1-201ENST00000350902 APBB1O00213 710 aa19.55■□□□□ 0.72
GRIN1-201ENST00000350902 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
GRIN1-201ENST00000350902 PPP2R1AP30153 589 aa19.54■□□□□ 0.72
GRIN1-201ENST00000350902 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
GRIN1-201ENST00000350902 NUTM2DQ5VT03 806 aaPredicted RBP19.53■□□□□ 0.72
GRIN1-201ENST00000350902 CGNL1Q0VF96 1302 aa19.53■□□□□ 0.72
GRIN1-201ENST00000350902 RSPH6AQ9H0K4 717 aa19.53■□□□□ 0.72
GRIN1-201ENST00000350902 TRAK1Q9UPV9 953 aa19.52■□□□□ 0.72
GRIN1-201ENST00000350902 MIA2Q96PC5 1412 aa19.52■□□□□ 0.72
GRIN1-201ENST00000350902 HDGFL2Q7Z4V5 671 aaPredicted RBP19.51■□□□□ 0.71
GRIN1-201ENST00000350902 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
GRIN1-201ENST00000350902 RPRD2Q5VT52 1461 aaKnown RBP19.51■□□□□ 0.71
GRIN1-201ENST00000350902 PTMAP06454 111 aaKnown RBP19.5■□□□□ 0.71
GRIN1-201ENST00000350902 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
GRIN1-201ENST00000350902 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
GRIN1-201ENST00000350902 ABCC5O15440 1437 aa19.48■□□□□ 0.71
GRIN1-201ENST00000350902 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
GRIN1-201ENST00000350902 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
GRIN1-201ENST00000350902 DNTTIP2Q5QJE6 756 aaKnown RBP19.47■□□□□ 0.71
GRIN1-201ENST00000350902 CHMP4BQ9H444 224 aaKnown RBP19.47■□□□□ 0.71
GRIN1-201ENST00000350902 TULP1O00294 542 aaPredicted RBP19.46■□□□□ 0.71
GRIN1-201ENST00000350902 VSIG10Q8N0Z9 540 aa19.45■□□□□ 0.7
GRIN1-201ENST00000350902 GBP4Q96PP9 640 aa19.44■□□□□ 0.7
GRIN1-201ENST00000350902 ELL2O00472 640 aaPredicted RBP19.44■□□□□ 0.7
GRIN1-201ENST00000350902 PLCB2Q00722 1185 aa19.44■□□□□ 0.7
GRIN1-201ENST00000350902 MSNP26038 577 aaKnown RBP19.43■□□□□ 0.7
GRIN1-201ENST00000350902 EIF3AQ14152 1382 aaKnown RBP19.43■□□□□ 0.7
GRIN1-201ENST00000350902 HSP90AA2PQ14568 343 aaPredicted RBP19.42■□□□□ 0.7
GRIN1-201ENST00000350902 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
GRIN1-201ENST00000350902 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
GRIN1-201ENST00000350902 DHX29Q7Z478 1369 aaKnown RBP19.41■□□□□ 0.7
GRIN1-201ENST00000350902 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
GRIN1-201ENST00000350902 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
GRIN1-201ENST00000350902 ZKSCAN2Q63HK3 967 aa19.4■□□□□ 0.7
GRIN1-201ENST00000350902 ROCK1Q13464 1354 aa19.39■□□□□ 0.69
GRIN1-201ENST00000350902 FOXD4L5Q5VV16 416 aaPredicted RBP19.39■□□□□ 0.69
GRIN1-201ENST00000350902 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
GRIN1-201ENST00000350902 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
GRIN1-201ENST00000350902 TERF2IPQ9NYB0 399 aa19.39■□□□□ 0.69
GRIN1-201ENST00000350902 IPO8O15397 1037 aaKnown RBP19.38■□□□□ 0.69
GRIN1-201ENST00000350902 LNPKQ9C0E8 428 aa19.37■□□□□ 0.69
GRIN1-201ENST00000350902 NPHP1O15259 732 aa19.37■□□□□ 0.69
GRIN1-201ENST00000350902 TCP11L2Q8N4U5 519 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms