RNA–Protein interactions for RNA: ENST00000350902.9

GRIN1-201, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIN1, Length 4,465 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-201ENST00000350902 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
GRIN1-201ENST00000350902 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
GRIN1-201ENST00000350902 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
GRIN1-201ENST00000350902 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.77
GRIN1-201ENST00000350902 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
GRIN1-201ENST00000350902 EHMT2Q96KQ7 1210 aa25.02■■□□□ 1.6
GRIN1-201ENST00000350902 HRCP23327 699 aa24.8■■□□□ 1.56
GRIN1-201ENST00000350902 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
GRIN1-201ENST00000350902 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
GRIN1-201ENST00000350902 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
GRIN1-201ENST00000350902 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.5
GRIN1-201ENST00000350902 TTBK1Q5TCY1 1321 aaPredicted RBP24.24■■□□□ 1.47
GRIN1-201ENST00000350902 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
GRIN1-201ENST00000350902 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
GRIN1-201ENST00000350902 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
GRIN1-201ENST00000350902 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
GRIN1-201ENST00000350902 PELP1Q8IZL8 1130 aaKnown RBP23.87■■□□□ 1.41
GRIN1-201ENST00000350902 APLP2Q06481 763 aa23.74■■□□□ 1.39
GRIN1-201ENST00000350902 CENPBP07199 599 aaPredicted RBP23.69■■□□□ 1.38
GRIN1-201ENST00000350902 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
GRIN1-201ENST00000350902 YTHDC1Q96MU7 727 aaKnown RBP23.65■■□□□ 1.38
GRIN1-201ENST00000350902 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
GRIN1-201ENST00000350902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
GRIN1-201ENST00000350902 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
GRIN1-201ENST00000350902 DIEXFQ68CQ4 756 aaKnown RBP23.26■■□□□ 1.31
GRIN1-201ENST00000350902 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
GRIN1-201ENST00000350902 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
GRIN1-201ENST00000350902 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
GRIN1-201ENST00000350902 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
GRIN1-201ENST00000350902 ATP1B4Q9UN42 357 aaPredicted RBP23.16■■□□□ 1.3
GRIN1-201ENST00000350902 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
GRIN1-201ENST00000350902 ACIN1Q9UKV3 1341 aaKnown RBP23.05■■□□□ 1.28
GRIN1-201ENST00000350902 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
GRIN1-201ENST00000350902 MYT1Q01538 1121 aa22.95■■□□□ 1.26
GRIN1-201ENST00000350902 ABCC9O60706 1549 aa22.86■■□□□ 1.25
GRIN1-201ENST00000350902 ITGAEP38570 1179 aa22.73■■□□□ 1.23
GRIN1-201ENST00000350902 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
GRIN1-201ENST00000350902 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
GRIN1-201ENST00000350902 PABPN1Q86U42 306 aaKnown RBP eCLIP22.65■■□□□ 1.22
GRIN1-201ENST00000350902 NEFLP07196 543 aa22.5■■□□□ 1.19
GRIN1-201ENST00000350902 BCANQ96GW7 911 aa22.47■■□□□ 1.19
GRIN1-201ENST00000350902 ERICH6Q7L0X2 663 aa22.45■■□□□ 1.18
GRIN1-201ENST00000350902 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
GRIN1-201ENST00000350902 RSF1Q96T23 1441 aaPredicted RBP22.42■■□□□ 1.18
GRIN1-201ENST00000350902 MIER1Q8N108 512 aa22.42■■□□□ 1.18
GRIN1-201ENST00000350902 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
GRIN1-201ENST00000350902 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
GRIN1-201ENST00000350902 POLR3GLQ9BT43 218 aa22.21■■□□□ 1.15
GRIN1-201ENST00000350902 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
GRIN1-201ENST00000350902 FAM50AQ14320 339 aaKnown RBP22.06■■□□□ 1.12
GRIN1-201ENST00000350902 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
GRIN1-201ENST00000350902 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
GRIN1-201ENST00000350902 FKBP8Q14318 412 aa21.97■■□□□ 1.11
GRIN1-201ENST00000350902 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
GRIN1-201ENST00000350902 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
GRIN1-201ENST00000350902 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
GRIN1-201ENST00000350902 ANP32CO43423 234 aa21.83■■□□□ 1.09
GRIN1-201ENST00000350902 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
GRIN1-201ENST00000350902 P3H3Q8IVL6 736 aa21.81■■□□□ 1.08
GRIN1-201ENST00000350902 SOGA1O94964 1423 aa21.81■■□□□ 1.08
GRIN1-201ENST00000350902 CLIP1P30622 1438 aa21.79■■□□□ 1.08
GRIN1-201ENST00000350902 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
GRIN1-201ENST00000350902 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
GRIN1-201ENST00000350902 FBLN2P98095 1184 aa21.71■■□□□ 1.07
GRIN1-201ENST00000350902 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.06
GRIN1-201ENST00000350902 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
GRIN1-201ENST00000350902 CLSPNQ9HAW4 1339 aa21.68■■□□□ 1.06
GRIN1-201ENST00000350902 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
GRIN1-201ENST00000350902 CDK11AQ9UQ88 783 aaPredicted RBP21.66■■□□□ 1.06
GRIN1-201ENST00000350902 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
GRIN1-201ENST00000350902 IRX6P78412 446 aaPredicted RBP21.65■■□□□ 1.06
GRIN1-201ENST00000350902 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
GRIN1-201ENST00000350902 ANP32EQ9BTT0 268 aa21.59■■□□□ 1.05
GRIN1-201ENST00000350902 HNRNPUQ00839 825 aaKnown RBP eCLIP21.58■■□□□ 1.05
GRIN1-201ENST00000350902 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
GRIN1-201ENST00000350902 EEA1Q15075 1411 aa21.52■■□□□ 1.04
GRIN1-201ENST00000350902 SIN3AQ96ST3 1273 aa21.49■■□□□ 1.03
GRIN1-201ENST00000350902 DAXXQ9UER7 740 aaPredicted RBP21.47■■□□□ 1.03
GRIN1-201ENST00000350902 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
GRIN1-201ENST00000350902 TSHZ2Q9NRE2 1034 aa21.46■■□□□ 1.03
GRIN1-201ENST00000350902 WIZO95785 1651 aa21.46■■□□□ 1.03
GRIN1-201ENST00000350902 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
GRIN1-201ENST00000350902 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
GRIN1-201ENST00000350902 ZNF326Q5BKZ1 582 aaKnown RBP21.44■■□□□ 1.02
GRIN1-201ENST00000350902 RTL5Q5HYW3 569 aaPredicted RBP21.43■■□□□ 1.02
GRIN1-201ENST00000350902 KANK4Q5T7N3 995 aaPredicted RBP21.43■■□□□ 1.02
GRIN1-201ENST00000350902 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
GRIN1-201ENST00000350902 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
GRIN1-201ENST00000350902 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
GRIN1-201ENST00000350902 NACADO15069 1562 aa21.38■■□□□ 1.01
GRIN1-201ENST00000350902 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
GRIN1-201ENST00000350902 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1
GRIN1-201ENST00000350902 NBR1Q14596 966 aa21.31■■□□□ 1
GRIN1-201ENST00000350902 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
GRIN1-201ENST00000350902 BCL11AQ9H165 835 aa21.29■■□□□ 1
GRIN1-201ENST00000350902 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
GRIN1-201ENST00000350902 RBM19Q9Y4C8 960 aaKnown RBP21.28■■□□□ 1
GRIN1-201ENST00000350902 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
GRIN1-201ENST00000350902 ZNF777Q9ULD5 760 aaPredicted RBP21.23■□□□□ 0.99
GRIN1-201ENST00000350902 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms