RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 EIF5BO60841 1220 aaKnown RBP13.65□□□□□ -0.22
CHRNA1-202ENST00000348749 PNISRQ8TF01 805 aaKnown RBP13.65□□□□□ -0.22
CHRNA1-202ENST00000348749 CFDP1Q9UEE9 299 aaPredicted RBP13.65□□□□□ -0.22
CHRNA1-202ENST00000348749 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
CHRNA1-202ENST00000348749 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
CHRNA1-202ENST00000348749 FRAT1Q92837 279 aaPredicted RBP13.65□□□□□ -0.22
CHRNA1-202ENST00000348749 ANKRD50Q9ULJ7 1429 aa13.64□□□□□ -0.23
CHRNA1-202ENST00000348749 INSRP06213 1382 aa13.64□□□□□ -0.23
CHRNA1-202ENST00000348749 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
CHRNA1-202ENST00000348749 RALBP1Q15311 655 aa13.63□□□□□ -0.23
CHRNA1-202ENST00000348749 ZMYM4Q5VZL5 1548 aa13.63□□□□□ -0.23
CHRNA1-202ENST00000348749 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
CHRNA1-202ENST00000348749 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
CHRNA1-202ENST00000348749 PTPRGP23470 1445 aa13.62□□□□□ -0.23
CHRNA1-202ENST00000348749 PKD2Q13563 968 aa13.62□□□□□ -0.23
CHRNA1-202ENST00000348749 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
CHRNA1-202ENST00000348749 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
CHRNA1-202ENST00000348749 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
CHRNA1-202ENST00000348749 CARMIL2Q6F5E8 1435 aa13.6□□□□□ -0.23
CHRNA1-202ENST00000348749 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
CHRNA1-202ENST00000348749 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
CHRNA1-202ENST00000348749 EIF4G3O43432 1585 aaKnown RBP13.6□□□□□ -0.23
CHRNA1-202ENST00000348749 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
CHRNA1-202ENST00000348749 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
CHRNA1-202ENST00000348749 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
CHRNA1-202ENST00000348749 LAMC1P11047 1609 aa13.59□□□□□ -0.23
CHRNA1-202ENST00000348749 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
CHRNA1-202ENST00000348749 C9orf84Q5VXU9 1444 aa13.58□□□□□ -0.24
CHRNA1-202ENST00000348749 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
CHRNA1-202ENST00000348749 PKNOX2Q96KN3 472 aa13.56□□□□□ -0.24
CHRNA1-202ENST00000348749 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
CHRNA1-202ENST00000348749 ABCA8O94911 1581 aa13.56□□□□□ -0.24
CHRNA1-202ENST00000348749 NUP155O75694 1391 aa13.55□□□□□ -0.24
CHRNA1-202ENST00000348749 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
CHRNA1-202ENST00000348749 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
CHRNA1-202ENST00000348749 NUP160Q12769 1436 aa13.54□□□□□ -0.24
CHRNA1-202ENST00000348749 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
CHRNA1-202ENST00000348749 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
CHRNA1-202ENST00000348749 PARD3Q8TEW0 1356 aa13.53□□□□□ -0.24
CHRNA1-202ENST00000348749 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.24
CHRNA1-202ENST00000348749 NLRP13Q86W25 1043 aa13.52□□□□□ -0.24
CHRNA1-202ENST00000348749 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.24
CHRNA1-202ENST00000348749 RSPH4AQ5TD94 716 aa13.52□□□□□ -0.25
CHRNA1-202ENST00000348749 GPRASP1Q5JY77 1395 aa13.52□□□□□ -0.25
CHRNA1-202ENST00000348749 TSPY4P0CV99 314 aa13.51□□□□□ -0.25
CHRNA1-202ENST00000348749 TSPY10P0CW01 314 aa13.51□□□□□ -0.25
CHRNA1-202ENST00000348749 PLEKHD1A6NEE1 506 aa13.51□□□□□ -0.25
CHRNA1-202ENST00000348749 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
CHRNA1-202ENST00000348749 ZNF326Q5BKZ1 582 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-202ENST00000348749 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-202ENST00000348749 MAST1Q9Y2H9 1570 aa13.5□□□□□ -0.25
CHRNA1-202ENST00000348749 PRAG1Q86YV5 1406 aa13.49□□□□□ -0.25
CHRNA1-202ENST00000348749 UNC13BO14795 1591 aa13.49□□□□□ -0.25
CHRNA1-202ENST00000348749 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
CHRNA1-202ENST00000348749 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
CHRNA1-202ENST00000348749 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
CHRNA1-202ENST00000348749 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
CHRNA1-202ENST00000348749 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
CHRNA1-202ENST00000348749 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
CHRNA1-202ENST00000348749 ZNF777Q9ULD5 760 aaPredicted RBP13.48□□□□□ -0.25
CHRNA1-202ENST00000348749 ATP10BO94823 1461 aa13.48□□□□□ -0.25
CHRNA1-202ENST00000348749 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
CHRNA1-202ENST00000348749 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
CHRNA1-202ENST00000348749 COL17A1Q9UMD9 1497 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-202ENST00000348749 PREX2Q70Z35 1606 aa13.47□□□□□ -0.25
CHRNA1-202ENST00000348749 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-202ENST00000348749 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
CHRNA1-202ENST00000348749 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
CHRNA1-202ENST00000348749 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
CHRNA1-202ENST00000348749 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
CHRNA1-202ENST00000348749 CENPQQ7L2Z9 268 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-202ENST00000348749 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-202ENST00000348749 JPH4Q96JJ6 628 aa13.45□□□□□ -0.26
CHRNA1-202ENST00000348749 CCDC144AA2RUR9 1427 aa13.45□□□□□ -0.26
CHRNA1-202ENST00000348749 VIRMAQ69YN4 1812 aaKnown RBP13.44□□□□□ -0.26
CHRNA1-202ENST00000348749 ATP10AO60312 1499 aa13.44□□□□□ -0.26
CHRNA1-202ENST00000348749 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-202ENST00000348749 IQGAP3Q86VI3 1631 aa13.43□□□□□ -0.26
CHRNA1-202ENST00000348749 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
CHRNA1-202ENST00000348749 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
CHRNA1-202ENST00000348749 CNGB1Q14028 1251 aaPredicted RBP13.43□□□□□ -0.26
CHRNA1-202ENST00000348749 RRAGDQ9NQL2 400 aaPredicted RBP13.43□□□□□ -0.26
CHRNA1-202ENST00000348749 SAMD9LQ8IVG5 1584 aa13.43□□□□□ -0.26
CHRNA1-202ENST00000348749 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
CHRNA1-202ENST00000348749 SKAP1Q86WV1 359 aa13.41□□□□□ -0.26
CHRNA1-202ENST00000348749 RNF17Q9BXT8 1623 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-202ENST00000348749 RIMBP3CA6NJZ7 1639 aa13.4□□□□□ -0.26
CHRNA1-202ENST00000348749 RIMBP3BA6NNM3 1639 aa13.4□□□□□ -0.26
CHRNA1-202ENST00000348749 RIMBP3Q9UFD9 1639 aa13.4□□□□□ -0.26
CHRNA1-202ENST00000348749 PLIN1O60240 522 aa13.4□□□□□ -0.27
CHRNA1-202ENST00000348749 MYO5CQ9NQX4 1742 aa13.39□□□□□ -0.27
CHRNA1-202ENST00000348749 A2MP01023 1474 aa13.39□□□□□ -0.27
CHRNA1-202ENST00000348749 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
CHRNA1-202ENST00000348749 MAGI2Q86UL8 1455 aa13.39□□□□□ -0.27
CHRNA1-202ENST00000348749 RRP9O43818 475 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-202ENST00000348749 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
CHRNA1-202ENST00000348749 ERBINQ96RT1 1412 aa13.38□□□□□ -0.27
CHRNA1-202ENST00000348749 PLA2R1Q13018 1463 aa13.37□□□□□ -0.27
CHRNA1-202ENST00000348749 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
CHRNA1-202ENST00000348749 ZMYND15Q9H091 742 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms