RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 RALBP1Q15311 655 aa10.76□□□□□ -0.69
NBR1-201ENST00000341165 CCDC136Q96JN2 1154 aa10.76□□□□□ -0.69
NBR1-201ENST00000341165 CHD1O14646 1710 aa10.75□□□□□ -0.69
NBR1-201ENST00000341165 CNGB1Q14028 1251 aaPredicted RBP10.75□□□□□ -0.69
NBR1-201ENST00000341165 RGL3Q3MIN7 710 aa10.75□□□□□ -0.69
NBR1-201ENST00000341165 KANK1Q14678 1352 aa10.74□□□□□ -0.69
NBR1-201ENST00000341165 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
NBR1-201ENST00000341165 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
NBR1-201ENST00000341165 SPAG9O60271 1321 aaKnown RBP10.74□□□□□ -0.69
NBR1-201ENST00000341165 SYCP2Q9BX26 1530 aa10.74□□□□□ -0.69
NBR1-201ENST00000341165 STAC3Q96MF2 364 aa10.74□□□□□ -0.69
NBR1-201ENST00000341165 SAMD9LQ8IVG5 1584 aa10.74□□□□□ -0.69
NBR1-201ENST00000341165 DUOX2Q9NRD8 1548 aa10.74□□□□□ -0.69
NBR1-201ENST00000341165 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
NBR1-201ENST00000341165 PLCH2O75038 1416 aa10.73□□□□□ -0.69
NBR1-201ENST00000341165 MAST1Q9Y2H9 1570 aa10.73□□□□□ -0.69
NBR1-201ENST00000341165 ST20-MTHFSA0A0A6YYL1 179 aa10.73□□□□□ -0.69
NBR1-201ENST00000341165 SHROOM2Q13796 1616 aa10.73□□□□□ -0.69
NBR1-201ENST00000341165 ERBINQ96RT1 1412 aa10.73□□□□□ -0.69
NBR1-201ENST00000341165 UHRF1BP1LA0JNW5 1464 aa10.72□□□□□ -0.69
NBR1-201ENST00000341165 PODXL2Q9NZ53 605 aa10.72□□□□□ -0.69
NBR1-201ENST00000341165 NBR1Q14596 966 aa10.72□□□□□ -0.69
NBR1-201ENST00000341165 CDCA8Q53HL2 280 aa10.72□□□□□ -0.69
NBR1-201ENST00000341165 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
NBR1-201ENST00000341165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.71□□□□□ -0.69
NBR1-201ENST00000341165 TSHZ2Q9NRE2 1034 aa10.71□□□□□ -0.69
NBR1-201ENST00000341165 TMF1P82094 1093 aa10.71□□□□□ -0.7
NBR1-201ENST00000341165 MYO5CQ9NQX4 1742 aa10.71□□□□□ -0.7
NBR1-201ENST00000341165 MYBBP1AQ9BQG0 1328 aaKnown RBP10.69□□□□□ -0.7
NBR1-201ENST00000341165 POLR1AO95602 1720 aaPredicted RBP10.69□□□□□ -0.7
NBR1-201ENST00000341165 CDC42BPBQ9Y5S2 1711 aa10.69□□□□□ -0.7
NBR1-201ENST00000341165 PLXNC1O60486 1568 aa10.68□□□□□ -0.7
NBR1-201ENST00000341165 KDM5CP41229 1560 aa10.68□□□□□ -0.7
NBR1-201ENST00000341165 TTC37Q6PGP7 1564 aa10.68□□□□□ -0.7
NBR1-201ENST00000341165 BRD4O60885 1362 aaPredicted RBP10.67□□□□□ -0.7
NBR1-201ENST00000341165 RTEL1-TNFRSF6BF6WH68 1400 aa10.67□□□□□ -0.7
NBR1-201ENST00000341165 WASHC2CQ9Y4E1 1318 aa10.67□□□□□ -0.7
NBR1-201ENST00000341165 UNC13BO14795 1591 aa10.66□□□□□ -0.7
NBR1-201ENST00000341165 PRAG1Q86YV5 1406 aa10.66□□□□□ -0.7
NBR1-201ENST00000341165 EIF2AK4Q9P2K8 1649 aaKnown RBP10.66□□□□□ -0.7
NBR1-201ENST00000341165 CCDC184Q52MB2 194 aa10.66□□□□□ -0.7
NBR1-201ENST00000341165 NLRP13Q86W25 1043 aa10.66□□□□□ -0.7
NBR1-201ENST00000341165 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
NBR1-201ENST00000341165 DHX29Q7Z478 1369 aaKnown RBP10.66□□□□□ -0.7
NBR1-201ENST00000341165 IRX6P78412 446 aaPredicted RBP10.65□□□□□ -0.7
NBR1-201ENST00000341165 EIF3AQ14152 1382 aaKnown RBP10.64□□□□□ -0.71
NBR1-201ENST00000341165 ARAP3Q8WWN8 1544 aa10.64□□□□□ -0.71
NBR1-201ENST00000341165 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
NBR1-201ENST00000341165 IQGAP3Q86VI3 1631 aa10.63□□□□□ -0.71
NBR1-201ENST00000341165 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
NBR1-201ENST00000341165 SMG6Q86US8 1419 aaKnown RBP10.63□□□□□ -0.71
NBR1-201ENST00000341165 GPRASP1Q5JY77 1395 aa10.63□□□□□ -0.71
NBR1-201ENST00000341165 ATP10AO60312 1499 aa10.63□□□□□ -0.71
NBR1-201ENST00000341165 WDR7Q9Y4E6 1490 aa10.62□□□□□ -0.71
NBR1-201ENST00000341165 KNSTRNQ9Y448 316 aa10.62□□□□□ -0.71
NBR1-201ENST00000341165 ABCC1P33527 1531 aa10.62□□□□□ -0.71
NBR1-201ENST00000341165 PDE3BQ13370 1112 aa10.62□□□□□ -0.71
NBR1-201ENST00000341165 PNISRQ8TF01 805 aaKnown RBP10.62□□□□□ -0.71
NBR1-201ENST00000341165 KIF3BO15066 747 aa10.61□□□□□ -0.71
NBR1-201ENST00000341165 AFAP1Q8N556 730 aa10.61□□□□□ -0.71
NBR1-201ENST00000341165 ERCC6L2Q5T890 1561 aa10.61□□□□□ -0.71
NBR1-201ENST00000341165 TRAPPC8Q9Y2L5 1435 aa10.61□□□□□ -0.71
NBR1-201ENST00000341165 A0A0U1RQG5 324 aaPredicted RBP10.61□□□□□ -0.71
NBR1-201ENST00000341165 NBPF1Q3BBV0 1214 aa10.6□□□□□ -0.71
NBR1-201ENST00000341165 A2MP01023 1474 aa10.6□□□□□ -0.71
NBR1-201ENST00000341165 FANCAO15360 1455 aa10.6□□□□□ -0.71
NBR1-201ENST00000341165 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
NBR1-201ENST00000341165 RBM19Q9Y4C8 960 aaKnown RBP10.59□□□□□ -0.71
NBR1-201ENST00000341165 MAGI2Q86UL8 1455 aa10.59□□□□□ -0.71
NBR1-201ENST00000341165 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
NBR1-201ENST00000341165 SCAPERQ9BY12 1400 aa10.58□□□□□ -0.72
NBR1-201ENST00000341165 ADGRL1O94910 1474 aa10.58□□□□□ -0.72
NBR1-201ENST00000341165 WDR43Q15061 677 aaKnown RBP eCLIP10.58□□□□□ -0.722e-7■■■□□ 17.7
NBR1-201ENST00000341165 OSCARQ8IYS5 282 aa10.58□□□□□ -0.72
NBR1-201ENST00000341165 PANK3Q9H999 370 aa10.58□□□□□ -0.72
NBR1-201ENST00000341165 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
NBR1-201ENST00000341165 PKNOX2Q96KN3 472 aa10.58□□□□□ -0.72
NBR1-201ENST00000341165 PLA2R1Q13018 1463 aa10.57□□□□□ -0.72
NBR1-201ENST00000341165 LAMC1P11047 1609 aa10.57□□□□□ -0.72
NBR1-201ENST00000341165 TRPM1Q7Z4N2 1603 aa10.57□□□□□ -0.72
NBR1-201ENST00000341165 COL17A1Q9UMD9 1497 aaPredicted RBP10.56□□□□□ -0.72
NBR1-201ENST00000341165 PARD3Q8TEW0 1356 aa10.55□□□□□ -0.72
NBR1-201ENST00000341165 PRDM15P57071 1507 aaPredicted RBP10.55□□□□□ -0.72
NBR1-201ENST00000341165 ATP7AQ04656 1500 aa10.55□□□□□ -0.72
NBR1-201ENST00000341165 CHGAP10645 457 aaKnown RBP10.55□□□□□ -0.72
NBR1-201ENST00000341165 B4GALNT3Q6L9W6 998 aa10.54□□□□□ -0.72
NBR1-201ENST00000341165 SCAF11Q99590 1463 aaKnown RBP10.54□□□□□ -0.72
NBR1-201ENST00000341165 ASXL2Q76L83 1435 aa10.54□□□□□ -0.72
NBR1-201ENST00000341165 TRPM2O94759 1503 aa10.54□□□□□ -0.72
NBR1-201ENST00000341165 ZFYVE16Q7Z3T8 1539 aa10.54□□□□□ -0.72
NBR1-201ENST00000341165 INSRP06213 1382 aa10.53□□□□□ -0.72
NBR1-201ENST00000341165 LRPPRCP42704 1394 aaKnown RBP10.53□□□□□ -0.72
NBR1-201ENST00000341165 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
NBR1-201ENST00000341165 TESK2Q96S53 571 aa10.53□□□□□ -0.72
NBR1-201ENST00000341165 PTPRTO14522 1441 aa10.52□□□□□ -0.73
NBR1-201ENST00000341165 RCAN3Q9UKA8 241 aa10.52□□□□□ -0.73
NBR1-201ENST00000341165 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.73
NBR1-201ENST00000341165 DEKP35659 375 aaKnown RBP10.52□□□□□ -0.73
NBR1-201ENST00000341165 ZNF518AQ6AHZ1 1483 aa10.52□□□□□ -0.73
NBR1-201ENST00000341165 SALL2Q9Y467 1007 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms