RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 GOLGA6L3A6NEY3 463 aa14.61□□□□□ -0.07
SHANK2-201ENST00000338508 CSPP1Q1MSJ5 1256 aa14.61□□□□□ -0.07
SHANK2-201ENST00000338508 FAM184AQ8NB25 1140 aa14.61□□□□□ -0.07
SHANK2-201ENST00000338508 MEX3CQ5U5Q3 659 aaKnown RBP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 RCAN3Q9UKA8 241 aa14.6□□□□□ -0.07
SHANK2-201ENST00000338508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 PTMSP20962 102 aa14.6□□□□□ -0.07
SHANK2-201ENST00000338508 ZNF592Q92610 1267 aa14.6□□□□□ -0.07
SHANK2-201ENST00000338508 SETQ01105 290 aaPredicted RBP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
SHANK2-201ENST00000338508 ELL2O00472 640 aaPredicted RBP14.58□□□□□ -0.07
SHANK2-201ENST00000338508 NECTIN2Q92692 538 aa14.58□□□□□ -0.07
SHANK2-201ENST00000338508 HMMRO75330 724 aa14.58□□□□□ -0.08
SHANK2-201ENST00000338508 TPM2P07951 284 aa14.58□□□□□ -0.08
SHANK2-201ENST00000338508 FOSBP53539 338 aa14.58□□□□□ -0.08
SHANK2-201ENST00000338508 RBM19Q9Y4C8 960 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 ROCK2O75116 1388 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 APPP05067 770 aa14.57□□□□□ -0.08
SHANK2-201ENST00000338508 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 HSPA5P11021 654 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 NOL10Q9BSC4 688 aaKnown RBP14.56□□□□□ -0.08
SHANK2-201ENST00000338508 GOLGA6L19H0YKK7 550 aa14.56□□□□□ -0.08
SHANK2-201ENST00000338508 PMFBP1Q8TBY8 1022 aa14.56□□□□□ -0.08
SHANK2-201ENST00000338508 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
SHANK2-201ENST00000338508 VPS37DQ86XT2 251 aa14.55□□□□□ -0.08
SHANK2-201ENST00000338508 PKD2Q13563 968 aa14.54□□□□□ -0.08
SHANK2-201ENST00000338508 EID1Q9Y6B2 187 aa14.54□□□□□ -0.08
SHANK2-201ENST00000338508 SYNE3Q6ZMZ3 975 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 KDM4AO75164 1064 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 CCDC43Q96MW1 224 aaKnown RBP14.53□□□□□ -0.08
SHANK2-201ENST00000338508 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 ST18O60284 1047 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 PHF14O94880 888 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 EIF2S2P20042 333 aaKnown RBP14.53□□□□□ -0.08
SHANK2-201ENST00000338508 AMOTL1Q8IY63 956 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 USP35Q9P2H5 1018 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 BECN2A8MW95 431 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.08
SHANK2-201ENST00000338508 FYB1O15117 783 aa14.52□□□□□ -0.08
SHANK2-201ENST00000338508 TPM1P09493 284 aa14.52□□□□□ -0.09
SHANK2-201ENST00000338508 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
SHANK2-201ENST00000338508 NAP1L1P55209 391 aaKnown RBP14.51□□□□□ -0.09
SHANK2-201ENST00000338508 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
SHANK2-201ENST00000338508 TCERG1O14776 1098 aaKnown RBP14.51□□□□□ -0.09
SHANK2-201ENST00000338508 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
SHANK2-201ENST00000338508 ZFYVE27Q5T4F4 411 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 ANKRD45Q5TZF3 282 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 CCDC70Q6NSX1 233 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 KIF3AQ9Y496 699 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
SHANK2-201ENST00000338508 SLC4A3P48751 1232 aa14.49□□□□□ -0.09
SHANK2-201ENST00000338508 TRIM29Q14134 588 aa14.49□□□□□ -0.09
SHANK2-201ENST00000338508 ODF2Q5BJF6 829 aa14.48□□□□□ -0.09
SHANK2-201ENST00000338508 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
SHANK2-201ENST00000338508 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
SHANK2-201ENST00000338508 CT47A1Q5JQC4 288 aaPredicted RBP14.48□□□□□ -0.09
SHANK2-201ENST00000338508 PAF1Q8N7H5 531 aa14.48□□□□□ -0.09
SHANK2-201ENST00000338508 SKIDA1Q1XH10 827 aa14.47□□□□□ -0.09
SHANK2-201ENST00000338508 NFXL1Q6ZNB6 911 aa14.47□□□□□ -0.09
SHANK2-201ENST00000338508 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
SHANK2-201ENST00000338508 ZNF771Q7L3S4 317 aaPredicted RBP14.47□□□□□ -0.09
SHANK2-201ENST00000338508 PPP1R1BQ9UD71 204 aaPredicted RBP14.46□□□□□ -0.09
SHANK2-201ENST00000338508 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.09
SHANK2-201ENST00000338508 KIF27Q86VH2 1401 aa14.46□□□□□ -0.1
SHANK2-201ENST00000338508 CHMP4AQ9BY43 222 aa14.45□□□□□ -0.1
SHANK2-201ENST00000338508 CALRP27797 417 aaKnown RBP14.45□□□□□ -0.1
SHANK2-201ENST00000338508 CENPJQ9HC77 1338 aaPredicted RBP14.45□□□□□ -0.1
SHANK2-201ENST00000338508 C9orf78Q9NZ63 289 aaPredicted RBP14.45□□□□□ -0.1
SHANK2-201ENST00000338508 KIF3BO15066 747 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 ANO2Q9NQ90 1003 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 HOMER1Q86YM7 354 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 TTC5Q8N0Z6 440 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 DDX49Q9Y6V7 483 aaKnown RBP14.44□□□□□ -0.1
SHANK2-201ENST00000338508 IPO7O95373 1038 aaKnown RBP14.43□□□□□ -0.1
SHANK2-201ENST00000338508 DIAPH3Q9NSV4 1193 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 TMEM132AQ24JP5 1023 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 CCDC27Q2M243 656 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 R3HCC1Q9Y3T6 440 aaKnown RBP14.42□□□□□ -0.1
SHANK2-201ENST00000338508 IKQ13123 557 aaPredicted RBP14.42□□□□□ -0.1
SHANK2-201ENST00000338508 CPLX1O14810 134 aa14.42□□□□□ -0.1
SHANK2-201ENST00000338508 PLIN1O60240 522 aa14.42□□□□□ -0.1
SHANK2-201ENST00000338508 CCDC47Q96A33 483 aaKnown RBP14.41□□□□□ -0.1
SHANK2-201ENST00000338508 TEFQ10587 303 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 GPS2Q13227 327 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 TTLL5Q6EMB2 1281 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 HSP90AA2PQ14568 343 aaPredicted RBP14.41□□□□□ -0.1
SHANK2-201ENST00000338508 RBM33Q96EV2 1170 aaKnown RBP14.41□□□□□ -0.1
SHANK2-201ENST00000338508 LMOD3Q0VAK6 560 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 WASHC2CQ9Y4E1 1318 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 EPS15P42566 896 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 BICD2Q8TD16 824 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 ERICH2A1L162 156 aa14.39□□□□□ -0.11
SHANK2-201ENST00000338508 NEXNQ0ZGT2 675 aa14.39□□□□□ -0.11
SHANK2-201ENST00000338508 ANKRD20A12PQ8NF67 263 aa14.39□□□□□ -0.11
SHANK2-201ENST00000338508 FAM177BA6PVY3 158 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms