RNA–Protein interactions for RNA: ENST00000328257.12

PPME1-201, Transcript of protein phosphatase methylesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPME1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-201ENST00000328257 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
PPME1-201ENST00000328257 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
PPME1-201ENST00000328257 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
PPME1-201ENST00000328257 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
PPME1-201ENST00000328257 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
PPME1-201ENST00000328257 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
PPME1-201ENST00000328257 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
PPME1-201ENST00000328257 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
PPME1-201ENST00000328257 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
PPME1-201ENST00000328257 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
PPME1-201ENST00000328257 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
PPME1-201ENST00000328257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
PPME1-201ENST00000328257 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
PPME1-201ENST00000328257 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
PPME1-201ENST00000328257 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
PPME1-201ENST00000328257 FBLN2P98095 1184 aa16.38■□□□□ 0.21
PPME1-201ENST00000328257 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
PPME1-201ENST00000328257 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
PPME1-201ENST00000328257 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
PPME1-201ENST00000328257 ABCA5Q8WWZ7 1642 aa16.38■□□□□ 0.21
PPME1-201ENST00000328257 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
PPME1-201ENST00000328257 WWC1Q8IX03 1113 aa16.37■□□□□ 0.21
PPME1-201ENST00000328257 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
PPME1-201ENST00000328257 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
PPME1-201ENST00000328257 MMP14P50281 582 aa16.36■□□□□ 0.21
PPME1-201ENST00000328257 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
PPME1-201ENST00000328257 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
PPME1-201ENST00000328257 IRX5P78411 483 aaPredicted RBP16.36■□□□□ 0.21
PPME1-201ENST00000328257 C8orf34Q49A92 452 aa16.35■□□□□ 0.21
PPME1-201ENST00000328257 SLC20A2Q08357 652 aa16.35■□□□□ 0.21
PPME1-201ENST00000328257 CLGNO14967 610 aa16.34■□□□□ 0.21
PPME1-201ENST00000328257 CBX1P83916 185 aa16.34■□□□□ 0.21
PPME1-201ENST00000328257 DNAJC2Q99543 621 aaKnown RBP16.34■□□□□ 0.21
PPME1-201ENST00000328257 BECN1Q14457 450 aa16.33■□□□□ 0.2
PPME1-201ENST00000328257 C14orf37Q86TY3 774 aa16.33■□□□□ 0.2
PPME1-201ENST00000328257 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
PPME1-201ENST00000328257 TRAK2O60296 914 aa16.32■□□□□ 0.2
PPME1-201ENST00000328257 MCM4P33991 863 aa16.32■□□□□ 0.2
PPME1-201ENST00000328257 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
PPME1-201ENST00000328257 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
PPME1-201ENST00000328257 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
PPME1-201ENST00000328257 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
PPME1-201ENST00000328257 APPP05067 770 aa16.31■□□□□ 0.2
PPME1-201ENST00000328257 ANTXR1Q9H6X2 564 aa16.31■□□□□ 0.2
PPME1-201ENST00000328257 PHLDB1Q86UU1 1377 aa16.3■□□□□ 0.2
PPME1-201ENST00000328257 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
PPME1-201ENST00000328257 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
PPME1-201ENST00000328257 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
PPME1-201ENST00000328257 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
PPME1-201ENST00000328257 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
PPME1-201ENST00000328257 PSEN1P49768 467 aa16.28■□□□□ 0.2
PPME1-201ENST00000328257 CCDC173Q0VFZ6 552 aa16.28■□□□□ 0.2
PPME1-201ENST00000328257 ARHGEF11O15085 1522 aa16.27■□□□□ 0.2
PPME1-201ENST00000328257 KCNJ4P48050 445 aa16.26■□□□□ 0.19
PPME1-201ENST00000328257 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
PPME1-201ENST00000328257 FAM193AP78312 1265 aa16.25■□□□□ 0.19
PPME1-201ENST00000328257 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
PPME1-201ENST00000328257 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
PPME1-201ENST00000328257 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
PPME1-201ENST00000328257 PPP1R9BQ96SB3 815 aa16.24■□□□□ 0.19
PPME1-201ENST00000328257 KANK4Q5T7N3 995 aaPredicted RBP16.24■□□□□ 0.19
PPME1-201ENST00000328257 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
PPME1-201ENST00000328257 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
PPME1-201ENST00000328257 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
PPME1-201ENST00000328257 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
PPME1-201ENST00000328257 SOX12O15370 315 aa16.23■□□□□ 0.19
PPME1-201ENST00000328257 SASS6Q6UVJ0 657 aa16.23■□□□□ 0.19
PPME1-201ENST00000328257 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
PPME1-201ENST00000328257 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
PPME1-201ENST00000328257 ZNF500O60304 480 aaPredicted RBP16.22■□□□□ 0.19
PPME1-201ENST00000328257 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
PPME1-201ENST00000328257 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
PPME1-201ENST00000328257 AXDND1Q5T1B0 1012 aaPredicted RBP16.22■□□□□ 0.19
PPME1-201ENST00000328257 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
PPME1-201ENST00000328257 ZNF771Q7L3S4 317 aaPredicted RBP16.22■□□□□ 0.19
PPME1-201ENST00000328257 ZNF622Q969S3 477 aaKnown RBP eCLIP16.22■□□□□ 0.191e-15■■□□□ 12
PPME1-201ENST00000328257 ATP2B3Q16720 1220 aa16.21■□□□□ 0.19
PPME1-201ENST00000328257 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.19
PPME1-201ENST00000328257 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.18
PPME1-201ENST00000328257 XPCQ01831 940 aaPredicted RBP16.21■□□□□ 0.18
PPME1-201ENST00000328257 GAS2L3Q86XJ1 694 aa16.2■□□□□ 0.18
PPME1-201ENST00000328257 IGSF3O75054 1194 aa16.2■□□□□ 0.18
PPME1-201ENST00000328257 PTMSP20962 102 aa16.2■□□□□ 0.18
PPME1-201ENST00000328257 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
PPME1-201ENST00000328257 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
PPME1-201ENST00000328257 KIF21BO75037 1637 aa16.18■□□□□ 0.18
PPME1-201ENST00000328257 HSPA5P11021 654 aaKnown RBP16.18■□□□□ 0.18
PPME1-201ENST00000328257 PTMAP06454 111 aaKnown RBP16.17■□□□□ 0.18
PPME1-201ENST00000328257 YY1AP1Q9H869 796 aa16.17■□□□□ 0.18
PPME1-201ENST00000328257 GEMIN8Q9NWZ8 242 aaKnown RBP16.17■□□□□ 0.18
PPME1-201ENST00000328257 USP19O94966 1318 aa16.17■□□□□ 0.18
PPME1-201ENST00000328257 ZBTB9Q96C00 473 aa16.16■□□□□ 0.18
PPME1-201ENST00000328257 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
PPME1-201ENST00000328257 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
PPME1-201ENST00000328257 HS1BP3Q53T59 392 aa16.16■□□□□ 0.18
PPME1-201ENST00000328257 NBPF1Q3BBV0 1214 aa16.15■□□□□ 0.18
PPME1-201ENST00000328257 CENPQQ7L2Z9 268 aaPredicted RBP16.15■□□□□ 0.18
PPME1-201ENST00000328257 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
PPME1-201ENST00000328257 NASPP49321 788 aaPredicted RBP16.14■□□□□ 0.17
PPME1-201ENST00000328257 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms