RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CLSTN1O94985 981 aa11.6□□□□□ -0.55
CTC1-201ENST00000315684 CEBPAP49715 358 aaPredicted RBP11.6□□□□□ -0.55
CTC1-201ENST00000315684 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
CTC1-201ENST00000315684 DCAF8L1A6NGE4 600 aa11.59□□□□□ -0.55
CTC1-201ENST00000315684 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
CTC1-201ENST00000315684 ELL2O00472 640 aaPredicted RBP11.58□□□□□ -0.55
CTC1-201ENST00000315684 GORABQ5T7V8 394 aa11.58□□□□□ -0.56
CTC1-201ENST00000315684 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
CTC1-201ENST00000315684 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
CTC1-201ENST00000315684 NLRP2Q9NX02 1062 aa11.58□□□□□ -0.56
CTC1-201ENST00000315684 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.57□□□□□ -0.56
CTC1-201ENST00000315684 SCAPERQ9BY12 1400 aa11.57□□□□□ -0.56
CTC1-201ENST00000315684 CDK11BP21127 795 aaKnown RBP11.57□□□□□ -0.56
CTC1-201ENST00000315684 EIF2S2P20042 333 aaKnown RBP11.57□□□□□ -0.56
CTC1-201ENST00000315684 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
CTC1-201ENST00000315684 KTN1Q86UP2 1357 aaKnown RBP11.56□□□□□ -0.56
CTC1-201ENST00000315684 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
CTC1-201ENST00000315684 SYNJ2O15056 1496 aa11.55□□□□□ -0.56
CTC1-201ENST00000315684 FAM177BA6PVY3 158 aa11.55□□□□□ -0.56
CTC1-201ENST00000315684 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
CTC1-201ENST00000315684 EVC2Q86UK5 1308 aa11.54□□□□□ -0.56
CTC1-201ENST00000315684 B4GALNT3Q6L9W6 998 aa11.54□□□□□ -0.56
CTC1-201ENST00000315684 STK31Q9BXU1 1019 aa11.54□□□□□ -0.56
CTC1-201ENST00000315684 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
CTC1-201ENST00000315684 ABTB2Q8N961 1025 aa11.54□□□□□ -0.56
CTC1-201ENST00000315684 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
CTC1-201ENST00000315684 ANKLE2Q86XL3 938 aa11.53□□□□□ -0.56
CTC1-201ENST00000315684 TTC5Q8N0Z6 440 aa11.53□□□□□ -0.56
CTC1-201ENST00000315684 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
CTC1-201ENST00000315684 THEMISQ8N1K5 641 aaPredicted RBP11.53□□□□□ -0.56
CTC1-201ENST00000315684 PANK3Q9H999 370 aa11.52□□□□□ -0.56
CTC1-201ENST00000315684 NCLP19338 710 aaKnown RBP11.52□□□□□ -0.57
CTC1-201ENST00000315684 NBR1Q14596 966 aa11.52□□□□□ -0.57
CTC1-201ENST00000315684 ITPRIPQ8IWB1 547 aa11.52□□□□□ -0.57
CTC1-201ENST00000315684 NLRP6P59044 892 aa11.52□□□□□ -0.57
CTC1-201ENST00000315684 CFTRP13569 1480 aa11.52□□□□□ -0.57
CTC1-201ENST00000315684 TEFQ10587 303 aa11.51□□□□□ -0.57
CTC1-201ENST00000315684 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
CTC1-201ENST00000315684 ANP32BQ92688 251 aaKnown RBP11.5□□□□□ -0.57
CTC1-201ENST00000315684 RAD21O60216 631 aa11.5□□□□□ -0.57
CTC1-201ENST00000315684 HMOX1P09601 288 aa11.49□□□□□ -0.57
CTC1-201ENST00000315684 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
CTC1-201ENST00000315684 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
CTC1-201ENST00000315684 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
CTC1-201ENST00000315684 RAPGEF4Q8WZA2 1011 aa11.49□□□□□ -0.57
CTC1-201ENST00000315684 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
CTC1-201ENST00000315684 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
CTC1-201ENST00000315684 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
CTC1-201ENST00000315684 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
CTC1-201ENST00000315684 CUX1P39880 1505 aa11.47□□□□□ -0.57
CTC1-201ENST00000315684 PRAM1Q96QH2 718 aa11.47□□□□□ -0.57
CTC1-201ENST00000315684 SMC4Q9NTJ3 1288 aa11.47□□□□□ -0.57
CTC1-201ENST00000315684 TOM1L2Q6ZVM7 507 aa11.46□□□□□ -0.57
CTC1-201ENST00000315684 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 AIMP1Q12904 312 aaKnown RBP11.45□□□□□ -0.58
CTC1-201ENST00000315684 CD109Q6YHK3 1445 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 BCL2L13Q9BXK5 485 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 TOMM22Q9NS69 142 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 POGZQ7Z3K3 1410 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 DHX57Q6P158 1386 aaKnown RBP11.45□□□□□ -0.58
CTC1-201ENST00000315684 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 GPRASP1Q5JY77 1395 aa11.45□□□□□ -0.58
CTC1-201ENST00000315684 CALD1Q05682 793 aaKnown RBP11.45□□□□□ -0.58
CTC1-201ENST00000315684 ZNF608Q9ULD9 1512 aaPredicted RBP11.44□□□□□ -0.58
CTC1-201ENST00000315684 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
CTC1-201ENST00000315684 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
CTC1-201ENST00000315684 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
CTC1-201ENST00000315684 ZRSR1Q15695 479 aaKnown RBP11.43□□□□□ -0.58
CTC1-201ENST00000315684 HSPA2P54652 639 aa11.43□□□□□ -0.58
CTC1-201ENST00000315684 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
CTC1-201ENST00000315684 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
CTC1-201ENST00000315684 TRIM6-TRIM34B2RNG4 842 aa11.42□□□□□ -0.58
CTC1-201ENST00000315684 UNC13AQ9UPW8 1703 aa11.42□□□□□ -0.58
CTC1-201ENST00000315684 MS4A1P11836 297 aa11.41□□□□□ -0.58
CTC1-201ENST00000315684 UBAP1LF5GYI3 381 aa11.41□□□□□ -0.58
CTC1-201ENST00000315684 VPS53Q5VIR6 699 aa11.41□□□□□ -0.58
CTC1-201ENST00000315684 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
CTC1-201ENST00000315684 LAMC3Q9Y6N6 1575 aa11.41□□□□□ -0.58
CTC1-201ENST00000315684 CHMP4BQ9H444 224 aaKnown RBP11.41□□□□□ -0.58
CTC1-201ENST00000315684 HMGXB3Q12766 1538 aa11.41□□□□□ -0.58
CTC1-201ENST00000315684 CENPJQ9HC77 1338 aaPredicted RBP11.4□□□□□ -0.58
CTC1-201ENST00000315684 IPO8O15397 1037 aaKnown RBP11.4□□□□□ -0.58
CTC1-201ENST00000315684 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
CTC1-201ENST00000315684 PLIN1O60240 522 aa11.4□□□□□ -0.58
CTC1-201ENST00000315684 VPS37DQ86XT2 251 aa11.4□□□□□ -0.59
CTC1-201ENST00000315684 CDK13Q14004 1512 aaKnown RBP11.39□□□□□ -0.59
CTC1-201ENST00000315684 NGLY1Q96IV0 654 aa11.39□□□□□ -0.59
CTC1-201ENST00000315684 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
CTC1-201ENST00000315684 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
CTC1-201ENST00000315684 NCOA2Q15596 1464 aa11.39□□□□□ -0.59
CTC1-201ENST00000315684 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
CTC1-201ENST00000315684 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
CTC1-201ENST00000315684 CDK19Q9BWU1 502 aa11.38□□□□□ -0.59
CTC1-201ENST00000315684 TRIM34Q9BYJ4 488 aa11.38□□□□□ -0.59
CTC1-201ENST00000315684 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
CTC1-201ENST00000315684 ARHGEF11O15085 1522 aa11.37□□□□□ -0.59
CTC1-201ENST00000315684 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
CTC1-201ENST00000315684 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
CTC1-201ENST00000315684 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms