RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 TRPM1Q7Z4N2 1603 aa10.76□□□□□ -0.69
NKRF-201ENST00000304449 C9orf84Q5VXU9 1444 aa10.76□□□□□ -0.69
NKRF-201ENST00000304449 SAMD9LQ8IVG5 1584 aa10.76□□□□□ -0.69
NKRF-201ENST00000304449 PREX2Q70Z35 1606 aa10.75□□□□□ -0.69
NKRF-201ENST00000304449 PKD2Q13563 968 aa10.75□□□□□ -0.69
NKRF-201ENST00000304449 LAMC1P11047 1609 aa10.74□□□□□ -0.69
NKRF-201ENST00000304449 UNC13BO14795 1591 aa10.74□□□□□ -0.69
NKRF-201ENST00000304449 MAST1Q9Y2H9 1570 aa10.74□□□□□ -0.69
NKRF-201ENST00000304449 PNISRQ8TF01 805 aaKnown RBP10.74□□□□□ -0.69
NKRF-201ENST00000304449 CARMIL2Q6F5E8 1435 aa10.73□□□□□ -0.69
NKRF-201ENST00000304449 ROCK2O75116 1388 aaKnown RBP10.73□□□□□ -0.69
NKRF-201ENST00000304449 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
NKRF-201ENST00000304449 NEFMP07197 916 aa10.72□□□□□ -0.69
NKRF-201ENST00000304449 FAM135AQ9P2D6 1515 aa10.72□□□□□ -0.69
NKRF-201ENST00000304449 IPO9Q96P70 1041 aaKnown RBP10.71□□□□□ -0.69
NKRF-201ENST00000304449 PLA2R1Q13018 1463 aa10.71□□□□□ -0.69
NKRF-201ENST00000304449 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
NKRF-201ENST00000304449 KTN1Q86UP2 1357 aaKnown RBP10.7□□□□□ -0.7
NKRF-201ENST00000304449 NUP155O75694 1391 aa10.7□□□□□ -0.7
NKRF-201ENST00000304449 POLR3GLQ9BT43 218 aa10.69□□□□□ -0.7
NKRF-201ENST00000304449 GPRASP1Q5JY77 1395 aa10.69□□□□□ -0.7
NKRF-201ENST00000304449 PRAG1Q86YV5 1406 aa10.69□□□□□ -0.7
NKRF-201ENST00000304449 PRDM15P57071 1507 aaPredicted RBP10.69□□□□□ -0.7
NKRF-201ENST00000304449 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
NKRF-201ENST00000304449 MYO5CQ9NQX4 1742 aa10.68□□□□□ -0.7
NKRF-201ENST00000304449 PLXNC1O60486 1568 aa10.68□□□□□ -0.7
NKRF-201ENST00000304449 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
NKRF-201ENST00000304449 SHROOM2Q13796 1616 aa10.68□□□□□ -0.7
NKRF-201ENST00000304449 BRD4O60885 1362 aaPredicted RBP10.68□□□□□ -0.7
NKRF-201ENST00000304449 KIF15Q9NS87 1388 aa10.68□□□□□ -0.7
NKRF-201ENST00000304449 CCDC141Q6ZP82 1450 aa10.68□□□□□ -0.7
NKRF-201ENST00000304449 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
NKRF-201ENST00000304449 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
NKRF-201ENST00000304449 PARD3Q8TEW0 1356 aa10.67□□□□□ -0.7
NKRF-201ENST00000304449 ATP10AO60312 1499 aa10.67□□□□□ -0.7
NKRF-201ENST00000304449 ZMYM4Q5VZL5 1548 aa10.67□□□□□ -0.7
NKRF-201ENST00000304449 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
NKRF-201ENST00000304449 RNF17Q9BXT8 1623 aaKnown RBP10.66□□□□□ -0.7
NKRF-201ENST00000304449 PER1O15534 1290 aaPredicted RBP10.66□□□□□ -0.7
NKRF-201ENST00000304449 A2MP01023 1474 aa10.65□□□□□ -0.7
NKRF-201ENST00000304449 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
NKRF-201ENST00000304449 ST20-MTHFSA0A0A6YYL1 179 aa10.65□□□□□ -0.7
NKRF-201ENST00000304449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.65□□□□□ -0.71
NKRF-201ENST00000304449 INSRP06213 1382 aa10.65□□□□□ -0.71
NKRF-201ENST00000304449 PLEKHD1A6NEE1 506 aa10.64□□□□□ -0.71
NKRF-201ENST00000304449 COL17A1Q9UMD9 1497 aaPredicted RBP10.64□□□□□ -0.71
NKRF-201ENST00000304449 MYBBP1AQ9BQG0 1328 aaKnown RBP10.64□□□□□ -0.71
NKRF-201ENST00000304449 CARD11Q9BXL7 1154 aa10.64□□□□□ -0.71
NKRF-201ENST00000304449 SYCP2Q9BX26 1530 aa10.63□□□□□ -0.71
NKRF-201ENST00000304449 ERCC6Q03468 1493 aa10.63□□□□□ -0.71
NKRF-201ENST00000304449 HNRNPMP52272 730 aaKnown RBP eCLIP10.62□□□□□ -0.71
NKRF-201ENST00000304449 RALBP1Q15311 655 aa10.62□□□□□ -0.71
NKRF-201ENST00000304449 UBE2Q2Q8WVN8 375 aa10.61□□□□□ -0.71
NKRF-201ENST00000304449 TESK2Q96S53 571 aa10.61□□□□□ -0.71
NKRF-201ENST00000304449 EIF2AK4Q9P2K8 1649 aaKnown RBP10.61□□□□□ -0.71
NKRF-201ENST00000304449 BLMP54132 1417 aaPredicted RBP10.61□□□□□ -0.71
NKRF-201ENST00000304449 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
NKRF-201ENST00000304449 DCAF11Q8TEB1 546 aa10.6□□□□□ -0.71
NKRF-201ENST00000304449 CHD1O14646 1710 aa10.6□□□□□ -0.71
NKRF-201ENST00000304449 ZNF326Q5BKZ1 582 aaKnown RBP10.59□□□□□ -0.71
NKRF-201ENST00000304449 IQGAP1P46940 1657 aa10.59□□□□□ -0.71
NKRF-201ENST00000304449 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
NKRF-201ENST00000304449 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
NKRF-201ENST00000304449 SLC4A3P48751 1232 aa10.59□□□□□ -0.71
NKRF-201ENST00000304449 DISP3Q9P2K9 1392 aa10.58□□□□□ -0.72
NKRF-201ENST00000304449 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
NKRF-201ENST00000304449 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
NKRF-201ENST00000304449 MADDQ8WXG6 1647 aa10.58□□□□□ -0.72
NKRF-201ENST00000304449 NBPF1Q3BBV0 1214 aa10.57□□□□□ -0.72
NKRF-201ENST00000304449 TMC1Q8TDI8 760 aa10.57□□□□□ -0.72
NKRF-201ENST00000304449 WASHC2CQ9Y4E1 1318 aa10.57□□□□□ -0.72
NKRF-201ENST00000304449 PLEKHH2Q8IVE3 1493 aa10.57□□□□□ -0.72
NKRF-201ENST00000304449 ERBINQ96RT1 1412 aa10.56□□□□□ -0.72
NKRF-201ENST00000304449 ABCC2Q92887 1545 aa10.56□□□□□ -0.72
NKRF-201ENST00000304449 ERCC6L2Q5T890 1561 aa10.56□□□□□ -0.72
NKRF-201ENST00000304449 RRP1P56182 461 aaKnown RBP10.56□□□□□ -0.72
NKRF-201ENST00000304449 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 SKAP1Q86WV1 359 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 DEPDC5O75140 1603 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 WDR7Q9Y4E6 1490 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 SPHKAPQ2M3C7 1700 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 MYOM1P52179 1685 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 FBLN2P98095 1184 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 ARHGAP5Q13017 1502 aa10.55□□□□□ -0.72
NKRF-201ENST00000304449 CEP152O94986 1710 aa10.54□□□□□ -0.72
NKRF-201ENST00000304449 ABCC1P33527 1531 aa10.54□□□□□ -0.72
NKRF-201ENST00000304449 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
NKRF-201ENST00000304449 ARXQ96QS3 562 aa10.53□□□□□ -0.72
NKRF-201ENST00000304449 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
NKRF-201ENST00000304449 NEURL4Q96JN8 1562 aa10.53□□□□□ -0.72
NKRF-201ENST00000304449 ZCCHC11Q5TAX3 1644 aaKnown RBP10.52□□□□□ -0.73
NKRF-201ENST00000304449 VWDEQ8N2E2 1590 aa10.52□□□□□ -0.73
NKRF-201ENST00000304449 TRPM2O94759 1503 aa10.52□□□□□ -0.73
NKRF-201ENST00000304449 CLASP1Q7Z460 1538 aa10.51□□□□□ -0.73
NKRF-201ENST00000304449 PTPRTO14522 1441 aa10.51□□□□□ -0.73
NKRF-201ENST00000304449 PLCH2O75038 1416 aa10.51□□□□□ -0.73
NKRF-201ENST00000304449 PDE4AP27815 886 aa10.51□□□□□ -0.73
NKRF-201ENST00000304449 EXOC6Q8TAG9 804 aa10.51□□□□□ -0.73
NKRF-201ENST00000304449 SYNMO15061 1565 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms