RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 RCAN3Q9UKA8 241 aa11.94□□□□□ -0.5
RAB3GAP1-201ENST00000264158 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
RAB3GAP1-201ENST00000264158 FRAT1Q92837 279 aaPredicted RBP11.93□□□□□ -0.5
RAB3GAP1-201ENST00000264158 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
RAB3GAP1-201ENST00000264158 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
RAB3GAP1-201ENST00000264158 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
RAB3GAP1-201ENST00000264158 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
RAB3GAP1-201ENST00000264158 FGD5Q6ZNL6 1462 aa11.92□□□□□ -0.5
RAB3GAP1-201ENST00000264158 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 IPO9Q96P70 1041 aaKnown RBP11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 RAD54L2Q9Y4B4 1467 aa11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 TTC5Q8N0Z6 440 aa11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
RAB3GAP1-201ENST00000264158 GPRASP1Q5JY77 1395 aa11.9□□□□□ -0.5
RAB3GAP1-201ENST00000264158 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
RAB3GAP1-201ENST00000264158 MINK1Q8N4C8 1332 aaPredicted RBP11.9□□□□□ -0.5
RAB3GAP1-201ENST00000264158 TCERG1O14776 1098 aaKnown RBP11.9□□□□□ -0.5
RAB3GAP1-201ENST00000264158 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
RAB3GAP1-201ENST00000264158 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
RAB3GAP1-201ENST00000264158 HMGB2P26583 209 aaKnown RBP11.89□□□□□ -0.51
RAB3GAP1-201ENST00000264158 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
RAB3GAP1-201ENST00000264158 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
RAB3GAP1-201ENST00000264158 FTSJ3Q8IY81 847 aaKnown RBP11.89□□□□□ -0.51
RAB3GAP1-201ENST00000264158 CLSTN1O94985 981 aa11.89□□□□□ -0.51
RAB3GAP1-201ENST00000264158 SLC26A8Q96RN1 970 aa11.89□□□□□ -0.51
RAB3GAP1-201ENST00000264158 RALBP1Q15311 655 aa11.88□□□□□ -0.51
RAB3GAP1-201ENST00000264158 PRDM11Q9NQV5 511 aa11.88□□□□□ -0.51
RAB3GAP1-201ENST00000264158 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
RAB3GAP1-201ENST00000264158 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
RAB3GAP1-201ENST00000264158 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
RAB3GAP1-201ENST00000264158 COG3Q96JB2 828 aa11.87□□□□□ -0.51
RAB3GAP1-201ENST00000264158 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
RAB3GAP1-201ENST00000264158 PEG3Q9GZU2 1588 aa11.86□□□□□ -0.51
RAB3GAP1-201ENST00000264158 HSPA2P54652 639 aa11.86□□□□□ -0.51
RAB3GAP1-201ENST00000264158 CEBPAP49715 358 aaPredicted RBP11.86□□□□□ -0.51
RAB3GAP1-201ENST00000264158 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
RAB3GAP1-201ENST00000264158 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
RAB3GAP1-201ENST00000264158 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
RAB3GAP1-201ENST00000264158 ROCK2O75116 1388 aaKnown RBP11.85□□□□□ -0.51
RAB3GAP1-201ENST00000264158 TEFQ10587 303 aa11.85□□□□□ -0.51
RAB3GAP1-201ENST00000264158 FGD1P98174 961 aa11.84□□□□□ -0.51
RAB3GAP1-201ENST00000264158 TOM1L2Q6ZVM7 507 aa11.84□□□□□ -0.51
RAB3GAP1-201ENST00000264158 IGF1RP08069 1367 aa11.83□□□□□ -0.52
RAB3GAP1-201ENST00000264158 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
RAB3GAP1-201ENST00000264158 CTDP1Q9Y5B0 961 aaPredicted RBP11.83□□□□□ -0.52
RAB3GAP1-201ENST00000264158 GOLGA6L22H0YM25 854 aa11.83□□□□□ -0.52
RAB3GAP1-201ENST00000264158 ARAP1Q96P48 1450 aa11.83□□□□□ -0.52
RAB3GAP1-201ENST00000264158 U2AF1L5P0DN76 240 aaPredicted RBP11.83□□□□□ -0.52
RAB3GAP1-201ENST00000264158 U2AF1Q01081 240 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NLRP6P59044 892 aa11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 EIF3AQ14152 1382 aaKnown RBP11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
RAB3GAP1-201ENST00000264158 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
RAB3GAP1-201ENST00000264158 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
RAB3GAP1-201ENST00000264158 STK31Q9BXU1 1019 aa11.81□□□□□ -0.52
RAB3GAP1-201ENST00000264158 KCNJ4P48050 445 aa11.81□□□□□ -0.52
RAB3GAP1-201ENST00000264158 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NAP1L5Q96NT1 182 aaPredicted RBP11.8□□□□□ -0.52
RAB3GAP1-201ENST00000264158 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
RAB3GAP1-201ENST00000264158 SPRYD3Q8NCJ5 442 aa11.8□□□□□ -0.52
RAB3GAP1-201ENST00000264158 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
RAB3GAP1-201ENST00000264158 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
RAB3GAP1-201ENST00000264158 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
RAB3GAP1-201ENST00000264158 NBPF14Q5TI25 921 aa11.79□□□□□ -0.52
RAB3GAP1-201ENST00000264158 EXOC6Q8TAG9 804 aa11.79□□□□□ -0.52
RAB3GAP1-201ENST00000264158 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
RAB3GAP1-201ENST00000264158 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
RAB3GAP1-201ENST00000264158 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
RAB3GAP1-201ENST00000264158 PDE4AP27815 886 aa11.77□□□□□ -0.52
RAB3GAP1-201ENST00000264158 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.52
RAB3GAP1-201ENST00000264158 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.52
RAB3GAP1-201ENST00000264158 KIF15Q9NS87 1388 aa11.77□□□□□ -0.52
RAB3GAP1-201ENST00000264158 CD109Q6YHK3 1445 aa11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 UACAQ9BZF9 1416 aa11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 XPCQ01831 940 aaPredicted RBP11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 LMTK3Q96Q04 1460 aa11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 SYNJ2O15056 1496 aa11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 PLIN1O60240 522 aa11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 PMFBP1Q8TBY8 1022 aa11.77□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CUX1P39880 1505 aa11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 USP47Q96K76 1375 aa11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 CCDC7Q96M83 1385 aa11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 SCAPERQ9BY12 1400 aa11.76□□□□□ -0.53
RAB3GAP1-201ENST00000264158 HSP90AB1P08238 724 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms