RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 A2MP01023 1474 aa11.26□□□□□ -0.61
GTF3C3-201ENST00000263956 EIF3AQ14152 1382 aaKnown RBP11.26□□□□□ -0.61
GTF3C3-201ENST00000263956 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
GTF3C3-201ENST00000263956 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
GTF3C3-201ENST00000263956 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
GTF3C3-201ENST00000263956 ZCCHC11Q5TAX3 1644 aaKnown RBP11.25□□□□□ -0.61
GTF3C3-201ENST00000263956 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
GTF3C3-201ENST00000263956 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
GTF3C3-201ENST00000263956 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
GTF3C3-201ENST00000263956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.25□□□□□ -0.61
GTF3C3-201ENST00000263956 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
GTF3C3-201ENST00000263956 TRAK1Q9UPV9 953 aa11.23□□□□□ -0.61
GTF3C3-201ENST00000263956 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
GTF3C3-201ENST00000263956 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
GTF3C3-201ENST00000263956 SHROOM2Q13796 1616 aa11.23□□□□□ -0.61
GTF3C3-201ENST00000263956 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
GTF3C3-201ENST00000263956 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
GTF3C3-201ENST00000263956 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
GTF3C3-201ENST00000263956 SHANK2Q9UPX8 1470 aa11.22□□□□□ -0.61
GTF3C3-201ENST00000263956 ERBINQ96RT1 1412 aa11.21□□□□□ -0.61
GTF3C3-201ENST00000263956 HAP1P54257 671 aaPredicted RBP11.21□□□□□ -0.62
GTF3C3-201ENST00000263956 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
GTF3C3-201ENST00000263956 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
GTF3C3-201ENST00000263956 RPGRIP1LQ68CZ1 1315 aa11.19□□□□□ -0.62
GTF3C3-201ENST00000263956 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
GTF3C3-201ENST00000263956 CEBPAP49715 358 aaPredicted RBP11.19□□□□□ -0.62
GTF3C3-201ENST00000263956 FBXO31Q5XUX0 539 aaPredicted RBP11.18□□□□□ -0.62
GTF3C3-201ENST00000263956 ANKLE2Q86XL3 938 aa11.18□□□□□ -0.62
GTF3C3-201ENST00000263956 ATP10AO60312 1499 aa11.18□□□□□ -0.62
GTF3C3-201ENST00000263956 CFAP74Q9C0B2 1584 aa11.18□□□□□ -0.62
GTF3C3-201ENST00000263956 HDGFL2Q7Z4V5 671 aaPredicted RBP11.18□□□□□ -0.62
GTF3C3-201ENST00000263956 ADCY10Q96PN6 1610 aa11.17□□□□□ -0.62
GTF3C3-201ENST00000263956 ZBTB7CA1YPR0 619 aa11.17□□□□□ -0.62
GTF3C3-201ENST00000263956 MYO5CQ9NQX4 1742 aa11.17□□□□□ -0.62
GTF3C3-201ENST00000263956 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
GTF3C3-201ENST00000263956 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
GTF3C3-201ENST00000263956 ATP7AQ04656 1500 aa11.16□□□□□ -0.62
GTF3C3-201ENST00000263956 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
GTF3C3-201ENST00000263956 ANKRD30BQ9BXX2 1392 aa11.15□□□□□ -0.62
GTF3C3-201ENST00000263956 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
GTF3C3-201ENST00000263956 IDI1Q13907 227 aa11.15□□□□□ -0.62
GTF3C3-201ENST00000263956 TTC37Q6PGP7 1564 aa11.15□□□□□ -0.62
GTF3C3-201ENST00000263956 CFAP53Q96M91 514 aa11.15□□□□□ -0.62
GTF3C3-201ENST00000263956 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
GTF3C3-201ENST00000263956 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
GTF3C3-201ENST00000263956 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
GTF3C3-201ENST00000263956 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
GTF3C3-201ENST00000263956 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
GTF3C3-201ENST00000263956 TNRQ92752 1358 aa11.13□□□□□ -0.63
GTF3C3-201ENST00000263956 EVC2Q86UK5 1308 aa11.13□□□□□ -0.63
GTF3C3-201ENST00000263956 TMEM132EQ6IEE7 984 aa11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 USP47Q96K76 1375 aa11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 ARHGEF5Q12774 1597 aa11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 ZFYVE16Q7Z3T8 1539 aa11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 PPM1GO15355 546 aaPredicted RBP11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 NGDNQ8NEJ9 315 aaKnown RBP11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
GTF3C3-201ENST00000263956 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
GTF3C3-201ENST00000263956 ARAP3Q8WWN8 1544 aa11.11□□□□□ -0.63
GTF3C3-201ENST00000263956 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
GTF3C3-201ENST00000263956 CNTLNQ9NXG0 1405 aa11.11□□□□□ -0.63
GTF3C3-201ENST00000263956 PREX2Q70Z35 1606 aa11.1□□□□□ -0.63
GTF3C3-201ENST00000263956 CC2D1BQ5T0F9 858 aaKnown RBP11.1□□□□□ -0.63
GTF3C3-201ENST00000263956 ABCC1P33527 1531 aa11.1□□□□□ -0.63
GTF3C3-201ENST00000263956 YEATS2Q9ULM3 1422 aa11.1□□□□□ -0.63
GTF3C3-201ENST00000263956 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
GTF3C3-201ENST00000263956 SAMD9LQ8IVG5 1584 aa11.1□□□□□ -0.63
GTF3C3-201ENST00000263956 SLC26A8Q96RN1 970 aa11.09□□□□□ -0.63
GTF3C3-201ENST00000263956 MLH3Q9UHC1 1453 aa11.09□□□□□ -0.63
GTF3C3-201ENST00000263956 ZMYM3Q14202 1370 aa11.09□□□□□ -0.63
GTF3C3-201ENST00000263956 MORC1Q86VD1 984 aa11.09□□□□□ -0.63
GTF3C3-201ENST00000263956 TSPOAP1O95153 1857 aa11.09□□□□□ -0.63
GTF3C3-201ENST00000263956 TNNT2P45379 298 aaPredicted RBP11.09□□□□□ -0.63
GTF3C3-201ENST00000263956 PROSER2Q86WR7 435 aaPredicted RBP11.08□□□□□ -0.64
GTF3C3-201ENST00000263956 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
GTF3C3-201ENST00000263956 MIER1Q8N108 512 aa11.07□□□□□ -0.64
GTF3C3-201ENST00000263956 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
GTF3C3-201ENST00000263956 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
GTF3C3-201ENST00000263956 ATF3P18847 181 aa11.06□□□□□ -0.64
GTF3C3-201ENST00000263956 NBPF8Q3BBV2 869 aa11.06□□□□□ -0.64
GTF3C3-201ENST00000263956 SOX12O15370 315 aa11.06□□□□□ -0.64
GTF3C3-201ENST00000263956 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
GTF3C3-201ENST00000263956 ABCA9Q8IUA7 1624 aa11.05□□□□□ -0.64
GTF3C3-201ENST00000263956 PRAM1Q96QH2 718 aa11.04□□□□□ -0.64
GTF3C3-201ENST00000263956 KTN1Q86UP2 1357 aaKnown RBP11.04□□□□□ -0.64
GTF3C3-201ENST00000263956 ARHGEF12Q9NZN5 1544 aa11.04□□□□□ -0.64
GTF3C3-201ENST00000263956 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
GTF3C3-201ENST00000263956 DMRT2Q9Y5R5 561 aa11.03□□□□□ -0.64
GTF3C3-201ENST00000263956 RPRD2Q5VT52 1461 aaKnown RBP11.03□□□□□ -0.64
GTF3C3-201ENST00000263956 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
GTF3C3-201ENST00000263956 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
GTF3C3-201ENST00000263956 PANK3Q9H999 370 aa11.01□□□□□ -0.65
GTF3C3-201ENST00000263956 CDC42BPAQ5VT25 1732 aa11.01□□□□□ -0.65
GTF3C3-201ENST00000263956 KDM6BO15054 1643 aa11.01□□□□□ -0.65
GTF3C3-201ENST00000263956 NOS1P29475 1434 aa11.01□□□□□ -0.65
GTF3C3-201ENST00000263956 RALBP1Q15311 655 aa11.01□□□□□ -0.65
GTF3C3-201ENST00000263956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
GTF3C3-201ENST00000263956 U2SURPO15042 1029 aaKnown RBP11□□□□□ -0.65
GTF3C3-201ENST00000263956 CANXP27824 592 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms