RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
SIN3B-201ENST00000248054 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
SIN3B-201ENST00000248054 U2SURPO15042 1029 aaKnown RBP20.4■□□□□ 0.86
SIN3B-201ENST00000248054 NAIPQ13075 1403 aa20.4■□□□□ 0.86
SIN3B-201ENST00000248054 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.85
SIN3B-201ENST00000248054 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.85
SIN3B-201ENST00000248054 PDE3BQ13370 1112 aa20.38■□□□□ 0.85
SIN3B-201ENST00000248054 NEUROD2Q15784 382 aa20.38■□□□□ 0.85
SIN3B-201ENST00000248054 KIF14Q15058 1648 aa20.38■□□□□ 0.85
SIN3B-201ENST00000248054 SAFB2Q14151 953 aaKnown RBP eCLIP20.37■□□□□ 0.85
SIN3B-201ENST00000248054 PRKRIP1Q9H875 184 aaPredicted RBP20.37■□□□□ 0.85
SIN3B-201ENST00000248054 EID1Q9Y6B2 187 aa20.37■□□□□ 0.85
SIN3B-201ENST00000248054 HAP1P54257 671 aaPredicted RBP20.36■□□□□ 0.85
SIN3B-201ENST00000248054 CCDC7Q96M83 1385 aa20.35■□□□□ 0.85
SIN3B-201ENST00000248054 PLB1Q6P1J6 1458 aa20.34■□□□□ 0.85
SIN3B-201ENST00000248054 CCDC141Q6ZP82 1450 aa20.33■□□□□ 0.85
SIN3B-201ENST00000248054 ZBTB7CA1YPR0 619 aa20.33■□□□□ 0.85
SIN3B-201ENST00000248054 CAMSAP2Q08AD1 1489 aa20.32■□□□□ 0.84
SIN3B-201ENST00000248054 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
SIN3B-201ENST00000248054 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
SIN3B-201ENST00000248054 FAM69CQ0P6D2 419 aa20.31■□□□□ 0.84
SIN3B-201ENST00000248054 CNTLNQ9NXG0 1405 aa20.3■□□□□ 0.84
SIN3B-201ENST00000248054 EVC2Q86UK5 1308 aa20.3■□□□□ 0.84
SIN3B-201ENST00000248054 AFAP1Q8N556 730 aa20.3■□□□□ 0.84
SIN3B-201ENST00000248054 AKNAQ7Z591 1439 aa20.3■□□□□ 0.84
SIN3B-201ENST00000248054 PANK3Q9H999 370 aa20.29■□□□□ 0.84
SIN3B-201ENST00000248054 UGGT2Q9NYU1 1516 aa20.28■□□□□ 0.84
SIN3B-201ENST00000248054 TRAK1Q9UPV9 953 aa20.28■□□□□ 0.84
SIN3B-201ENST00000248054 SENP3-EIF4A1A0A087X0R7 540 aa20.28■□□□□ 0.84
SIN3B-201ENST00000248054 ABCC5O15440 1437 aa20.27■□□□□ 0.84
SIN3B-201ENST00000248054 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
SIN3B-201ENST00000248054 ARHGEF11O15085 1522 aa20.26■□□□□ 0.83
SIN3B-201ENST00000248054 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
SIN3B-201ENST00000248054 KIF7Q2M1P5 1343 aa20.26■□□□□ 0.83
SIN3B-201ENST00000248054 RAPGEF6Q8TEU7 1601 aa20.26■□□□□ 0.83
SIN3B-201ENST00000248054 MSH5O43196 834 aa20.25■□□□□ 0.83
SIN3B-201ENST00000248054 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.25■□□□□ 0.83
SIN3B-201ENST00000248054 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
SIN3B-201ENST00000248054 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
SIN3B-201ENST00000248054 U2AF1L5P0DN76 240 aaPredicted RBP20.24■□□□□ 0.83
SIN3B-201ENST00000248054 U2AF1Q01081 240 aaKnown RBP eCLIP20.24■□□□□ 0.83
SIN3B-201ENST00000248054 WDR62O43379 1518 aa20.23■□□□□ 0.83
SIN3B-201ENST00000248054 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
SIN3B-201ENST00000248054 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
SIN3B-201ENST00000248054 ZBED9Q6R2W3 1325 aa20.22■□□□□ 0.83
SIN3B-201ENST00000248054 ARXQ96QS3 562 aa20.21■□□□□ 0.83
SIN3B-201ENST00000248054 GOLGA2Q08379 1002 aa20.21■□□□□ 0.83
SIN3B-201ENST00000248054 CFAP43Q8NDM7 1665 aa20.2■□□□□ 0.82
SIN3B-201ENST00000248054 GOLGA6L22H0YM25 854 aa20.2■□□□□ 0.82
SIN3B-201ENST00000248054 SCAPERQ9BY12 1400 aa20.2■□□□□ 0.82
SIN3B-201ENST00000248054 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
SIN3B-201ENST00000248054 IPO8O15397 1037 aaKnown RBP20.19■□□□□ 0.82
SIN3B-201ENST00000248054 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
SIN3B-201ENST00000248054 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
SIN3B-201ENST00000248054 IPO9Q96P70 1041 aaKnown RBP20.18■□□□□ 0.82
SIN3B-201ENST00000248054 KIAA0556O60303 1618 aa20.17■□□□□ 0.82
SIN3B-201ENST00000248054 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
SIN3B-201ENST00000248054 NCOA1Q15788 1441 aa20.17■□□□□ 0.82
SIN3B-201ENST00000248054 WASHC2AQ641Q2 1341 aa20.16■□□□□ 0.82
SIN3B-201ENST00000248054 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
SIN3B-201ENST00000248054 ITSN2Q9NZM3 1697 aa20.15■□□□□ 0.82
SIN3B-201ENST00000248054 RTF1Q92541 710 aaKnown RBP20.15■□□□□ 0.82
SIN3B-201ENST00000248054 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
SIN3B-201ENST00000248054 ANKRD30BQ9BXX2 1392 aa20.14■□□□□ 0.81
SIN3B-201ENST00000248054 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
SIN3B-201ENST00000248054 PLEKHG5O94827 1062 aa20.12■□□□□ 0.81
SIN3B-201ENST00000248054 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
SIN3B-201ENST00000248054 IL27Q8NEV9 243 aa20.12■□□□□ 0.81
SIN3B-201ENST00000248054 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
SIN3B-201ENST00000248054 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
SIN3B-201ENST00000248054 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
SIN3B-201ENST00000248054 BRD4O60885 1362 aaPredicted RBP20.11■□□□□ 0.81
SIN3B-201ENST00000248054 PBRM1Q86U86 1689 aa20.11■□□□□ 0.81
SIN3B-201ENST00000248054 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
SIN3B-201ENST00000248054 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
SIN3B-201ENST00000248054 NCLP19338 710 aaKnown RBP20.1■□□□□ 0.81
SIN3B-201ENST00000248054 NAP1L5Q96NT1 182 aaPredicted RBP20.1■□□□□ 0.81
SIN3B-201ENST00000248054 TCOF1Q13428 1488 aaKnown RBP20.09■□□□□ 0.81
SIN3B-201ENST00000248054 NBPF8Q3BBV2 869 aa20.09■□□□□ 0.81
SIN3B-201ENST00000248054 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
SIN3B-201ENST00000248054 NGDNQ8NEJ9 315 aaKnown RBP20.07■□□□□ 0.8
SIN3B-201ENST00000248054 ATP10BO94823 1461 aa20.07■□□□□ 0.8
SIN3B-201ENST00000248054 CD109Q6YHK3 1445 aa20.07■□□□□ 0.8
SIN3B-201ENST00000248054 ADGRL1O94910 1474 aa20.06■□□□□ 0.8
SIN3B-201ENST00000248054 NUP160Q12769 1436 aa20.06■□□□□ 0.8
SIN3B-201ENST00000248054 RGS3P49796 1198 aa20.05■□□□□ 0.8
SIN3B-201ENST00000248054 SOX12O15370 315 aa20.05■□□□□ 0.8
SIN3B-201ENST00000248054 E9PSI1 815 aa20.04■□□□□ 0.8
SIN3B-201ENST00000248054 MINK1Q8N4C8 1332 aaPredicted RBP20.03■□□□□ 0.8
SIN3B-201ENST00000248054 COG3Q96JB2 828 aa20.03■□□□□ 0.8
SIN3B-201ENST00000248054 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
SIN3B-201ENST00000248054 PAK3O75914 559 aaPredicted RBP20.03■□□□□ 0.8
SIN3B-201ENST00000248054 RPRD2Q5VT52 1461 aaKnown RBP20.03■□□□□ 0.8
SIN3B-201ENST00000248054 RWDD1Q9H446 243 aaPredicted RBP20.02■□□□□ 0.8
SIN3B-201ENST00000248054 CCDC146Q8IYE0 955 aa20.01■□□□□ 0.79
SIN3B-201ENST00000248054 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
SIN3B-201ENST00000248054 SAMD9Q5K651 1589 aa20.01■□□□□ 0.79
SIN3B-201ENST00000248054 CFAP70Q5T0N1 1121 aa20■□□□□ 0.79
SIN3B-201ENST00000248054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
SIN3B-201ENST00000248054 PLCH2O75038 1416 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms