RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 C1orf115Q9H7X2 142 aa11.02□□□□□ -0.65
SPARC-201ENST00000231061 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
SPARC-201ENST00000231061 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
SPARC-201ENST00000231061 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.65
SPARC-201ENST00000231061 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
SPARC-201ENST00000231061 GAPVD1Q14C86 1478 aa11.01□□□□□ -0.65
SPARC-201ENST00000231061 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
SPARC-201ENST00000231061 NCOA2Q15596 1464 aa11.01□□□□□ -0.65
SPARC-201ENST00000231061 MCCP23508 829 aa11□□□□□ -0.65
SPARC-201ENST00000231061 PTPRKQ15262 1439 aa11□□□□□ -0.65
SPARC-201ENST00000231061 E9PSI1 815 aa11□□□□□ -0.65
SPARC-201ENST00000231061 IRX3P78415 501 aaPredicted RBP11□□□□□ -0.65
SPARC-201ENST00000231061 MYOM3Q5VTT5 1437 aa10.99□□□□□ -0.65
SPARC-201ENST00000231061 UACAQ9BZF9 1416 aa10.99□□□□□ -0.65
SPARC-201ENST00000231061 HFM1A2PYH4 1435 aa10.99□□□□□ -0.65
SPARC-201ENST00000231061 CLGNO14967 610 aa10.99□□□□□ -0.65
SPARC-201ENST00000231061 KCTD17Q8N5Z5 321 aa10.99□□□□□ -0.65
SPARC-201ENST00000231061 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
SPARC-201ENST00000231061 FOXD4L6Q3SYB3 417 aaPredicted RBP10.98□□□□□ -0.65
SPARC-201ENST00000231061 FOXD4L3Q6VB84 417 aaPredicted RBP10.98□□□□□ -0.65
SPARC-201ENST00000231061 CCER2I3L3R5 266 aa10.98□□□□□ -0.65
SPARC-201ENST00000231061 NEFMP07197 916 aa10.98□□□□□ -0.65
SPARC-201ENST00000231061 HSP90AA1P07900 732 aaKnown RBP10.98□□□□□ -0.65
SPARC-201ENST00000231061 DNAJC2Q99543 621 aaKnown RBP10.97□□□□□ -0.65
SPARC-201ENST00000231061 PDS5BQ9NTI5 1447 aa10.97□□□□□ -0.65
SPARC-201ENST00000231061 NAIPQ13075 1403 aa10.96□□□□□ -0.65
SPARC-201ENST00000231061 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.65
SPARC-201ENST00000231061 GRIN2BQ13224 1484 aa10.95□□□□□ -0.66
SPARC-201ENST00000231061 LAMC3Q9Y6N6 1575 aa10.95□□□□□ -0.66
SPARC-201ENST00000231061 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
SPARC-201ENST00000231061 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
SPARC-201ENST00000231061 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
SPARC-201ENST00000231061 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
SPARC-201ENST00000231061 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
SPARC-201ENST00000231061 SAMD9Q5K651 1589 aa10.93□□□□□ -0.66
SPARC-201ENST00000231061 ABCA5Q8WWZ7 1642 aa10.93□□□□□ -0.66
SPARC-201ENST00000231061 ZNF622Q969S3 477 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPARC-201ENST00000231061 TMEM51Q9NW97 253 aa10.92□□□□□ -0.66
SPARC-201ENST00000231061 HNRNPUQ00839 825 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPARC-201ENST00000231061 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
SPARC-201ENST00000231061 ZHX1Q9UKY1 873 aaPredicted RBP10.91□□□□□ -0.66
SPARC-201ENST00000231061 PLEKHD1A6NEE1 506 aa10.9□□□□□ -0.66
SPARC-201ENST00000231061 LRRIQ1Q96JM4 1722 aa10.89□□□□□ -0.67
SPARC-201ENST00000231061 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
SPARC-201ENST00000231061 FANCIQ9NVI1 1328 aa10.89□□□□□ -0.67
SPARC-201ENST00000231061 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
SPARC-201ENST00000231061 SETQ01105 290 aaPredicted RBP10.89□□□□□ -0.67
SPARC-201ENST00000231061 EIF4G2P78344 907 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPARC-201ENST00000231061 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
SPARC-201ENST00000231061 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
SPARC-201ENST00000231061 AEBP1Q8IUX7 1158 aa10.88□□□□□ -0.67
SPARC-201ENST00000231061 MPHOSPH9Q99550 1183 aa10.88□□□□□ -0.67
SPARC-201ENST00000231061 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
SPARC-201ENST00000231061 PHF14O94880 888 aa10.87□□□□□ -0.67
SPARC-201ENST00000231061 RGL3Q3MIN7 710 aa10.87□□□□□ -0.67
SPARC-201ENST00000231061 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
SPARC-201ENST00000231061 TMTC2Q8N394 836 aa10.86□□□□□ -0.67
SPARC-201ENST00000231061 WASHC2AQ641Q2 1341 aa10.86□□□□□ -0.67
SPARC-201ENST00000231061 EPRSP07814 1512 aaKnown RBP10.86□□□□□ -0.67
SPARC-201ENST00000231061 L3MBTL2Q969R5 705 aa10.86□□□□□ -0.67
SPARC-201ENST00000231061 KIF21AQ7Z4S6 1674 aa10.85□□□□□ -0.67
SPARC-201ENST00000231061 NGEFQ8N5V2 710 aa10.84□□□□□ -0.67
SPARC-201ENST00000231061 IQGAP2Q13576 1575 aa10.84□□□□□ -0.67
SPARC-201ENST00000231061 SGSM3Q96HU1 749 aa10.84□□□□□ -0.67
SPARC-201ENST00000231061 TCOF1Q13428 1488 aaKnown RBP10.83□□□□□ -0.68
SPARC-201ENST00000231061 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
SPARC-201ENST00000231061 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
SPARC-201ENST00000231061 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
SPARC-201ENST00000231061 CC2D1BQ5T0F9 858 aaKnown RBP10.82□□□□□ -0.68
SPARC-201ENST00000231061 KDM6BO15054 1643 aa10.82□□□□□ -0.68
SPARC-201ENST00000231061 ZNF644Q9H582 1327 aaPredicted RBP10.82□□□□□ -0.68
SPARC-201ENST00000231061 KDM5BQ9UGL1 1544 aa10.81□□□□□ -0.68
SPARC-201ENST00000231061 CHMP4CQ96CF2 233 aa10.81□□□□□ -0.68
SPARC-201ENST00000231061 MIA2Q96PC5 1412 aa10.81□□□□□ -0.68
SPARC-201ENST00000231061 SEMA3FQ13275 785 aa10.81□□□□□ -0.68
SPARC-201ENST00000231061 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
SPARC-201ENST00000231061 MAFGO15525 162 aa10.81□□□□□ -0.68
SPARC-201ENST00000231061 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
SPARC-201ENST00000231061 MRS2Q9HD23 443 aa10.8□□□□□ -0.68
SPARC-201ENST00000231061 PBRM1Q86U86 1689 aa10.79□□□□□ -0.68
SPARC-201ENST00000231061 GCC2Q8IWJ2 1684 aa10.79□□□□□ -0.68
SPARC-201ENST00000231061 DENND4BO75064 1496 aaPredicted RBP10.79□□□□□ -0.68
SPARC-201ENST00000231061 ADAMTS12P58397 1594 aa10.79□□□□□ -0.68
SPARC-201ENST00000231061 AKNAQ7Z591 1439 aa10.79□□□□□ -0.68
SPARC-201ENST00000231061 ANP32BQ92688 251 aaKnown RBP10.79□□□□□ -0.68
SPARC-201ENST00000231061 WDR62O43379 1518 aa10.79□□□□□ -0.68
SPARC-201ENST00000231061 CNTLNQ9NXG0 1405 aa10.79□□□□□ -0.68
SPARC-201ENST00000231061 CCDC184Q52MB2 194 aa10.79□□□□□ -0.68
SPARC-201ENST00000231061 DAPK1P53355 1430 aa10.78□□□□□ -0.68
SPARC-201ENST00000231061 NBPF8Q3BBV2 869 aa10.78□□□□□ -0.68
SPARC-201ENST00000231061 CCDC7Q96M83 1385 aa10.77□□□□□ -0.68
SPARC-201ENST00000231061 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.69
SPARC-201ENST00000231061 IRF6O14896 467 aa10.77□□□□□ -0.69
SPARC-201ENST00000231061 BRD1O95696 1058 aa10.77□□□□□ -0.69
SPARC-201ENST00000231061 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
SPARC-201ENST00000231061 MMP14P50281 582 aa10.76□□□□□ -0.69
SPARC-201ENST00000231061 ARMCX6Q7L4S7 300 aa10.76□□□□□ -0.69
SPARC-201ENST00000231061 NOP58Q9Y2X3 529 aaKnown RBP10.76□□□□□ -0.69
SPARC-201ENST00000231061 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
SPARC-201ENST00000231061 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms