RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Tsen2Q6P7W5 460 aa21.45■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Ccer1Q9CQL2 403 aa21.45■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Ccdc47Q9D024 483 aaKnown RBP21.45■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Slc4a10Q5DTL9 1118 aa21.44■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Sart1Q9Z315 806 aaKnown RBP21.43■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Ccdc146E9Q9F7 977 aa21.42■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Isy1Q69ZQ2 285 aaKnown RBP21.42■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Tpd52l1O54818 204 aa21.42■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Tpm3P21107 285 aaKnown RBP21.41■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Kiaa0754Q69ZZ9 979 aa21.41■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Cux2P70298 1426 aa21.4■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Cabp4Q8VHC5 271 aa21.39■■□□□ 1.02
Shroom3-211ENSMUST00000225438 Cspp1B2RX88 1205 aa21.39■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Rrp12Q6P5B0 1295 aaKnown RBP21.39■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Mical1Q8VDP3 1048 aa21.38■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Vps53Q8CCB4 832 aa21.38■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Pank3Q8R2W9 370 aa21.36■■□□□ 1.01
Shroom3-211ENSMUST00000225438 SetQ9EQU5 289 aaKnown RBP21.36■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Smc4Q8CG47 1286 aa21.35■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Carmil1Q6EDY6 1374 aa21.35■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Ccdc60Q8C4J0 545 aa21.35■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Ylpm1Q9R0I7 1386 aaKnown RBP21.34■■□□□ 1.01
Shroom3-211ENSMUST00000225438 SlkO54988 1233 aa21.34■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Bcl11aQ9QYE3 773 aa21.33■■□□□ 1.01
Shroom3-211ENSMUST00000225438 Rab11fip3Q8CHD8 1047 aa21.33■■□□□ 1
Shroom3-211ENSMUST00000225438 Gpatch11Q3UFS4 262 aa21.32■■□□□ 1
Shroom3-211ENSMUST00000225438 Sf3a1Q8K4Z5 791 aaKnown RBP21.32■■□□□ 1
Shroom3-211ENSMUST00000225438 Gm21969J3QJZ1 289 aa21.32■■□□□ 1
Shroom3-211ENSMUST00000225438 AppP12023 770 aa21.32■■□□□ 1
Shroom3-211ENSMUST00000225438 Trim30aP15533 496 aa21.32■■□□□ 1
Shroom3-211ENSMUST00000225438 Ppm1fQ8CGA0 452 aa21.32■■□□□ 1
Shroom3-211ENSMUST00000225438 Ccnb3Q810T2 1396 aa21.31■■□□□ 1
Shroom3-211ENSMUST00000225438 Rsph3aQ3UFY4 516 aa21.31■■□□□ 1
Shroom3-211ENSMUST00000225438 St18Q80TY4 1045 aa21.3■■□□□ 1
Shroom3-211ENSMUST00000225438 Kri1Q8VDQ9 704 aaKnown RBP21.3■■□□□ 1
Shroom3-211ENSMUST00000225438 UacaQ8CGB3 1411 aa21.29■■□□□ 1
Shroom3-211ENSMUST00000225438 Ddrgk1Q80WW9 315 aa21.28■■□□□ 1
Shroom3-211ENSMUST00000225438 Tomm22Q9CPQ3 142 aa21.28■■□□□ 1
Shroom3-211ENSMUST00000225438 GsdmaQ9EST1 446 aa21.28■■□□□ 1
Shroom3-211ENSMUST00000225438 Shq1Q7TMX5 569 aa21.28■■□□□ 1
Shroom3-211ENSMUST00000225438 Noc3lQ8VI84 807 aaKnown RBP21.28■■□□□ 1
Shroom3-211ENSMUST00000225438 G3bp1P97855 465 aaKnown RBP21.28■■□□□ 1
Shroom3-211ENSMUST00000225438 Filip1lQ6P6L0 1131 aa21.27■■□□□ 1
Shroom3-211ENSMUST00000225438 Nap1l3Q794H2 544 aa21.27■■□□□ 1
Shroom3-211ENSMUST00000225438 Usp40Q8BWR4 1235 aa21.27■■□□□ 1
Shroom3-211ENSMUST00000225438 Becn1O88597 448 aa21.26■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Usp47Q8BY87 1376 aa21.25■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Cplx2P84086 134 aa21.25■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Inpp5dQ9ES52 1191 aa21.25■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Tpm2P58774 284 aa21.25■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Ciz1Q8VEH2 845 aa21.25■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Tpm4Q6IRU2 248 aa21.24■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Srek1Q8BZX4 494 aaKnown RBP21.24■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Krt82Q99M74 516 aa21.24■□□□□ 0.99
Shroom3-211ENSMUST00000225438 ChgaP26339 463 aaKnown RBP21.23■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Tpm1P58771 284 aa21.23■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Ddx11Q6AXC6 880 aa21.23■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Rock1P70335 1354 aa21.23■□□□□ 0.99
Shroom3-211ENSMUST00000225438 4933402E13RikQ9D4D2 429 aa21.23■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Chmp7Q8R1T1 451 aa21.23■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Evc2Q8K1G2 1220 aa21.22■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Fam184bQ0KK56 942 aa21.22■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Kif7B7ZNG0 1348 aa21.22■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Ubap1lG3UW59 384 aa21.21■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Sh3bgrQ9WUZ7 214 aa21.21■□□□□ 0.99
Shroom3-211ENSMUST00000225438 Cc2d1aQ8K1A6 943 aa21.2■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Mink1Q9JM52 1308 aa21.2■□□□□ 0.98
Shroom3-211ENSMUST00000225438 VgfQ0VGU4 617 aa21.2■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Glipr1l2Q9CQ35 332 aa21.2■□□□□ 0.98
Shroom3-211ENSMUST00000225438 BccipQ9CWI3 316 aa21.19■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Phldb1Q6PDH0 1371 aaKnown RBP21.19■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Dhx16G3X8X0 1044 aaKnown RBP21.18■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Casq1O09165 405 aa21.18■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Ralbp1Q62172 648 aa21.18■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Tceal9Q9DD24 104 aa21.18■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Gm21190A0A0G2JGJ6 266 aa21.18■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Smg6P61406 1418 aaKnown RBP21.17■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Odf2A3KGV1 830 aaKnown RBP21.17■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Eif2s2Q99L45 331 aaKnown RBP21.17■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Ftsj3Q9DBE9 838 aaKnown RBP21.16■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Ipo7Q9EPL8 1038 aaKnown RBP21.16■□□□□ 0.98
Shroom3-211ENSMUST00000225438 WrnO09053 1401 aa21.16■□□□□ 0.98
Shroom3-211ENSMUST00000225438 KinQ8K339 391 aa21.16■□□□□ 0.98
Shroom3-211ENSMUST00000225438 A0A1L1SQF0 893 aa21.16■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Gabpb2P81069 414 aa21.15■□□□□ 0.98
Shroom3-211ENSMUST00000225438 Triml2E9PW10 424 aa21.13■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Rnf20Q5DTM8 973 aa21.12■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Ush1cQ9ES64 910 aa21.12■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Fyb1O35601 819 aa21.12■□□□□ 0.97
Shroom3-211ENSMUST00000225438 AampJ3QN89 436 aa21.11■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Cplx1P63040 134 aa21.11■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Rapgef2Q8CHG7 1496 aa21.1■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Map7d2A2AG50 781 aa21.1■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Zscan10Q3URR7 782 aa21.09■□□□□ 0.97
Shroom3-211ENSMUST00000225438 CftrP26361 1476 aa21.09■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Rec8Q8C5S7 591 aa21.09■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Utp3Q9JI13 469 aaKnown RBP21.09■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Trim58Q5NCC9 485 aa21.08■□□□□ 0.97
Shroom3-211ENSMUST00000225438 Nolc1E9Q5C9 702 aaKnown RBP21.08■□□□□ 0.96
Shroom3-211ENSMUST00000225438 Gsdma3Q5Y4Y6 464 aa21.08■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms