RNA–Protein interactions for RNA: ENSMUST00000216677.1

Ncapd3-205, Transcript of Condensin-2 complex subunit D3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ncapd3, Length 5,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd3-205ENSMUST00000216677 Sart1Q9Z315 806 aaKnown RBP13.23□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 PnnO35691 725 aaKnown RBP13.22□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 Cux1P53564 1515 aa13.22□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 AknaQ80VW7 1404 aa13.22□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 Pde3bQ61409 1100 aa13.22□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 Gm973E9Q295 1059 aa13.21□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 Shroom4Q1W617 1475 aa13.21□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 Fan1Q69ZT1 1020 aa13.21□□□□□ -0.29
Ncapd3-205ENSMUST00000216677 Ttll13A4Q9F6 804 aa13.21□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 VgfQ0VGU4 617 aa13.21□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Kif3bQ61771 747 aa13.21□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Tsen2Q6P7W5 460 aa13.21□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Trim58Q5NCC9 485 aa13.2□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Cgnl1Q6AW69 1298 aa13.2□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Birc3O08863 600 aa13.2□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Plin1Q8CGN5 517 aa13.2□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Kif7B7ZNG0 1348 aa13.19□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Becn1O88597 448 aa13.19□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Arap1Q4LDD4 1452 aa13.18□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Smarce1O54941 411 aaKnown RBP13.18□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Atp6v1dP57746 247 aa13.18□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 GsdmaQ9EST1 446 aa13.18□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Kif16bB1AVY7 1312 aa13.17□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Znf326O88291 580 aa13.17□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Ecm2Q5FW85 670 aa13.17□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 WrnO09053 1401 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Rabep1O35551 862 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Taok2Q6ZQ29 1240 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Sh3bp5Q9Z131 463 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Cc2d2aQ8CFW7 1633 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 CenpjQ569L8 1344 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Ccdc30Q8BVF4 654 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Q3TQI7 289 aaKnown RBP13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Ccdc60Q8C4J0 545 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Ush1cQ9ES64 910 aa13.16□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Dhx29Q6PGC1 1365 aaKnown RBP13.15□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Arid3cA6PWV5 409 aa13.15□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Eif4g2Q62448 906 aaKnown RBP13.15□□□□□ -0.3
Ncapd3-205ENSMUST00000216677 Efcab5A0JP43 1406 aa13.14□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Ccdc146E9Q9F7 977 aa13.14□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Atl3Q91YH5 541 aa13.14□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 RdxP26043 583 aaKnown RBP13.14□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Arhgef5E9Q7D5 1581 aa13.14□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 CgnP59242 1191 aa13.14□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Usp40Q8BWR4 1235 aa13.14□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Ccdc183A2AJB1 534 aa13.13□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 G3bp1P97855 465 aaKnown RBP13.13□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Zfp444Q3TDV8 331 aaKnown RBP13.13□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Casq1O09165 405 aa13.13□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Cc2d2bA0A286YDU8 1405 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Cald1E9QA15 768 aaKnown RBP13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Iqgap2Q3UQ44 1575 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Plekhh1Q80TI1 1356 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Calcoco2A2A6M5 331 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Iffo2Q8R2V2 512 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Spag9Q58A65 1321 aaKnown RBP13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Glipr1l2Q9CQ35 332 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Ift140E9PY46 1464 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Zfp644E9QA22 1323 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Rfx1P48377 963 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Plekhg5Q66T02 1073 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Rassf8Q8CJ96 419 aa13.12□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Tdrd9Q14BI7 1383 aa13.11□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Plcd4Q8K3R3 807 aa13.11□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Pdcl3Q8BVF2 240 aa13.11□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Rtn4Q99P72 1162 aaKnown RBP13.11□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Senp3Q9EP97 568 aaKnown RBP13.11□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 NrkQ9R0G8 1455 aa13.11□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 MecomP14404 1042 aa13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Map3k1P53349 1493 aa13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Q7TT23 1179 aa13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Pknox2Q8BG99 474 aa13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 R3hcc1Q8BSI6 488 aa13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Cspp1B2RX88 1205 aa13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 Kiaa0754Q69ZZ9 979 aa13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 KarsQ99MN1 595 aaKnown RBP13.1□□□□□ -0.31
Ncapd3-205ENSMUST00000216677 St18Q80TY4 1045 aa13.08□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Pank1Q8K4K6 548 aa13.08□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Znf316Q6PGE4 1016 aa13.08□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Trim30aP15533 496 aa13.08□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Polr1aO35134 1717 aaKnown RBP13.07□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Filip1lQ6P6L0 1131 aa13.07□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Ciz1Q8VEH2 845 aa13.06□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Tiam1Q60610 1591 aa13.06□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Pibf1E9Q6K3 756 aa13.06□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Tnnt1O88346 262 aa13.05□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Gpatch11Q3UFS4 262 aa13.05□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Brpf1B2RRD7 1212 aa13.04□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Utp14aQ640M1 767 aaKnown RBP13.04□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Ncoa2Q61026 1462 aa13.04□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Stk31Q99MW1 1018 aa13.04□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Kcnh8P59111 1102 aa13.04□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Ppp2r1aQ76MZ3 589 aa13.04□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Sf3a1Q8K4Z5 791 aaKnown RBP13.04□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Ppp2r3aB2RXC8 1150 aa13.03□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Anapc15P60007 132 aa13.02□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Psme1P97371 249 aa13.02□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Cetn4Q8K4K1 168 aa13.02□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 CrebrfQ8CDG5 640 aaKnown RBP13.02□□□□□ -0.32
Ncapd3-205ENSMUST00000216677 Nsd2Q8BVE8 1365 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 107.4 ms