RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Dhx9O70133 1380 aaKnown RBP17.65■□□□□ 0.42
Prpf40a-206ENSMUST00000209364 Kif14L0N7N1 1674 aaKnown RBP17.65■□□□□ 0.42
Prpf40a-206ENSMUST00000209364 Trak1Q6PD31 939 aa17.64■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Cep170Q6A065 1588 aa17.64■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Map4P27546 1125 aaKnown RBP17.64■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Pabpn1Q8CCS6 302 aaKnown RBP17.64■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Ttbk1Q6PCN3 1308 aa17.63■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Zfyve16Q80U44 1528 aa17.61■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Asxl1P59598 1514 aa17.61■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Gtf3c3Q3TMP1 882 aa17.61■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Supt16hQ920B9 1047 aa17.61■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 PtprgQ05909 1442 aa17.6■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 DroshaQ5HZJ0 1373 aaKnown RBP17.6■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Clstn2Q9ER65 966 aa17.6■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Prdm16A2A935 1275 aa17.58■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Abca9Q8K449 1623 aa17.58■□□□□ 0.41
Prpf40a-206ENSMUST00000209364 Upf2A2AT37 1269 aaKnown RBP17.57■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Abca17E9PX95 1733 aa17.57■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Znf710Q3U288 666 aa17.54■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Arid3cA6PWV5 409 aa17.54■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Mbd5B1AYB6 1498 aa17.54■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Xrn1P97789 1719 aaKnown RBP17.53■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Spag9Q58A65 1321 aaKnown RBP17.53■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Dot1lQ6XZL8 1540 aa17.53■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Map3k5O35099 1380 aa17.53■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Sin3aQ60520 1274 aaKnown RBP17.53■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Plcd4Q8K3R3 807 aa17.53■□□□□ 0.4
Prpf40a-206ENSMUST00000209364 Zbtb7cQ8VCZ7 619 aa17.52■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Kif1bQ60575 1816 aaKnown RBP17.51■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Rgl3Q3UYI5 709 aa17.51■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Cd109Q8R422 1442 aa17.51■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Usp54Q8BL06 1588 aaKnown RBP17.51■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 ShprhQ7TPQ3 1674 aa17.5■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Calr4Q3TQS0 420 aa17.49■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Robo2Q7TPD3 1470 aa17.49■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Ak9G3UYQ4 1894 aa17.48■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Atp7aQ64430 1491 aa17.47■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Rock1P70335 1354 aa17.46■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Mug2P28666 1451 aa17.46■□□□□ 0.39
Prpf40a-206ENSMUST00000209364 Iqgap1Q9JKF1 1657 aaKnown RBP17.45■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Myo5cE9Q1F5 1742 aa17.45■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Myom3A2ABU4 1439 aa17.45■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Ncoa1P70365 1447 aa17.45■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Stra8P70278 393 aa17.44■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Irx3P81067 507 aa17.44■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Pde4cQ3UEI1 686 aa17.44■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Gm156Q58A37 223 aa17.44■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Ccdc9Q8VC31 543 aaKnown RBP17.44■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Nos1Q9Z0J4 1429 aa17.44■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Ccdc27Q3V036 639 aa17.43■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Lemd3Q9WU40 921 aa17.43■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Dapk1Q80YE7 1442 aa17.43■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Tarbp1E9Q368 1579 aa17.42■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Ppip5k1A2ARP1 1436 aa17.41■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Cpsf1Q9EPU4 1441 aaKnown RBP17.4■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Cdk13Q69ZA1 1511 aaKnown RBP17.4■□□□□ 0.38
Prpf40a-206ENSMUST00000209364 Nsd2Q8BVE8 1365 aa17.38■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Kdm5cP41230 1554 aa17.38■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Znf518aB2RRF6 1478 aaKnown RBP17.38■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 OvosQ3UU35 1456 aa17.38■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Washc2Q6PGL7 1334 aa17.38■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Adgrl3Q80TS3 1537 aa17.37■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Polr3aB2RXC6 1390 aa17.37■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 RalgapbQ8BQZ4 1484 aa17.36■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Fndc1E9Q043 1732 aa17.36■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Naip6Q9JIB6 1403 aa17.36■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Rundc1Q0VDN7 615 aa17.35■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Grwd1Q810D6 446 aaKnown RBP17.35■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Edc4Q3UJB9 1406 aaKnown RBP17.34■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Kif3bQ61771 747 aa17.34■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Cwc22Q8C5N3 908 aaKnown RBP17.34■□□□□ 0.37
Prpf40a-206ENSMUST00000209364 Atp10aO54827 1508 aa17.33■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Smg6P61406 1418 aaKnown RBP17.33■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 AglF8VPN4 1532 aa17.33■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Ylpm1Q9R0I7 1386 aaKnown RBP17.33■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Card11Q8CIS0 1159 aa17.32■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Plch2A2AP18 1501 aa17.32■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Topbp1Q6ZQF0 1515 aa17.32■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Abca6Q8K441 1624 aa17.31■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Tmem131lQ3U3D7 1597 aa17.3■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Kiaa0556Q8C753 1610 aa17.3■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Ppp4r2Q0VGB7 417 aa17.29■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Clasp1Q80TV8 1535 aaKnown RBP17.29■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Adamts13Q769J6 1426 aa17.29■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Depdc5P61460 1591 aa17.28■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Cdc42bpgQ80UW5 1551 aa17.28■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Ipo4Q8VI75 1082 aa17.28■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Cul9Q80TT8 1865 aa17.28■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 AnkarA2RT91 1465 aa17.28■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Wdr43Q6ZQL4 677 aaKnown RBP17.27■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Prex1Q69ZK0 1650 aa17.27■□□□□ 0.36
Prpf40a-206ENSMUST00000209364 Ptch1Q61115 1434 aa17.27■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 Gli2Q0VGT2 1544 aa17.26■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 RereQ80TZ9 1558 aa17.26■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 Dip2cE9PWR4 1557 aa17.25■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 Col17a1Q07563 1470 aa17.25■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 Pak3Q61036 559 aa17.25■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 Plekhg5Q66T02 1073 aa17.25■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 Tulp4Q9JIL5 1547 aa17.24■□□□□ 0.35
Prpf40a-206ENSMUST00000209364 AdgbG3UZ78 1657 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 88.2 ms