RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Tiam1Q60610 1591 aa16.81■□□□□ 0.28
Rnf40-202ENSMUST00000205694 U2surpQ6NV83 1029 aaKnown RBP16.81■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Stk26Q99JT2 416 aa16.81■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Pbrm1Q8BSQ9 1634 aaKnown RBP16.8■□□□□ 0.28
Rnf40-202ENSMUST00000205694 PtmsQ9D0J8 101 aaKnown RBP16.8■□□□□ 0.28
Rnf40-202ENSMUST00000205694 U2af1Q9D883 239 aaKnown RBP16.79■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Spryd3E9Q9B3 442 aa16.78■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Exoc6Q8R313 802 aa16.78■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Pcf11G3X9Z4 1553 aa16.77■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Mak16Q8BGS0 296 aaKnown RBP16.77■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Rassf8Q8CJ96 419 aa16.77■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Pla2r1Q62028 1487 aa16.76■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Spag9Q58A65 1321 aaKnown RBP16.76■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Slc4a3P16283 1227 aa16.76■□□□□ 0.27
Rnf40-202ENSMUST00000205694 MlecQ6ZQI3 291 aaKnown RBP16.76■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Supt16hQ920B9 1047 aa16.76■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Lrriq1Q0P5X1 1673 aa16.76■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Gm973E9Q295 1059 aa16.75■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Tmco5bQ80X59 307 aa16.75■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Plin1Q8CGN5 517 aa16.74■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Ankrd26Q811D2 1581 aa16.74■□□□□ 0.27
Rnf40-202ENSMUST00000205694 SafbD3YXK2 937 aaKnown RBP16.74■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Anapc15P60007 132 aa16.74■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Golga2Q921M4 999 aa16.74■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Magi1Q6RHR9 1471 aa16.74■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Q3TQI7 289 aaKnown RBP16.73■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Prdm16A2A935 1275 aa16.73■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Sin3aQ60520 1274 aaKnown RBP16.73■□□□□ 0.27
Rnf40-202ENSMUST00000205694 EspnQ9ET47 871 aa16.73■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Rusc2Q80U22 1514 aa16.73■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Dcaf11Q91VU6 549 aa16.73■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Birc3O08863 600 aa16.72■□□□□ 0.27
Rnf40-202ENSMUST00000205694 WizO88286 1684 aaKnown RBP16.72■□□□□ 0.27
Rnf40-202ENSMUST00000205694 HdgfP51859 237 aaKnown RBP16.72■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Nol10Q5RJG1 687 aaKnown RBP16.71■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Dnai1Q8C0M8 701 aa16.71■□□□□ 0.27
Rnf40-202ENSMUST00000205694 Psme1P97371 249 aa16.7■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Nup160Q9Z0W3 1402 aaKnown RBP16.7■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Mug1P28665 1476 aa16.7■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Srcin1Q9QWI6 1250 aa16.69■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Ggt6Q6PDE7 497 aa16.69■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Txndc2Q6P902 515 aa16.68■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Rock2P70336 1388 aa16.67■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Iffo2Q8R2V2 512 aa16.67■□□□□ 0.26
Rnf40-202ENSMUST00000205694 A2mQ6GQT1 1474 aa16.67■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Dnai2A2AC93 623 aa16.66■□□□□ 0.26
Rnf40-202ENSMUST00000205694 NexmifQ5DTT1 1515 aa16.66■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Gpatch8A2A6A1 1505 aa16.65■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Irx3P81067 507 aa16.65■□□□□ 0.26
Rnf40-202ENSMUST00000205694 MecomP14404 1042 aa16.65■□□□□ 0.26
Rnf40-202ENSMUST00000205694 Cluap1Q8R3P7 413 aa16.64■□□□□ 0.25
Rnf40-202ENSMUST00000205694 AU015836B2RUM3 263 aa16.64■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Stard8Q8K031 1019 aa16.64■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Erich6bQ9D4S6 220 aa16.64■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Pcmtd1P59913 357 aa16.63■□□□□ 0.25
Rnf40-202ENSMUST00000205694 PxdnQ3UQ28 1475 aa16.63■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Vps8Q0P5W1 1427 aa16.63■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Eif4g3Q80XI3 1579 aaKnown RBP16.63■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Magi3Q9EQJ9 1476 aa16.63■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Tnnt1O88346 262 aa16.63■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Bcl11aQ9QYE3 773 aa16.63■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Sox12Q04890 314 aa16.62■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Dnttip2Q8R2M2 758 aaKnown RBP16.61■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Nsd2Q8BVE8 1365 aa16.61■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Ipo8Q7TMY7 1010 aa16.6■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Znf330Q922H9 316 aa16.6■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Fancd2Q80V62 1450 aa16.6■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Abcc1O35379 1528 aa16.6■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Ythdc2B2RR83 1445 aaKnown RBP16.6■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Znf316Q6PGE4 1016 aa16.6■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Ecm2Q5FW85 670 aa16.59■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Ccar1Q8CH18 1146 aaKnown RBP16.59■□□□□ 0.25
Rnf40-202ENSMUST00000205694 R3hcc1Q8BSI6 488 aa16.59■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Caskin1Q6P9K8 1431 aa16.59■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Atp10dQ8K2X1 1416 aa16.58■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Shroom2A2ALU4 1481 aa16.58■□□□□ 0.25
Rnf40-202ENSMUST00000205694 Ksr2Q3UVC0 959 aa16.58■□□□□ 0.24
Rnf40-202ENSMUST00000205694 CgnP59242 1191 aa16.58■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Gapvd1Q6PAR5 1458 aa16.58■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Calcoco2A2A6M5 331 aa16.58■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Il16O54824 1322 aa16.57■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Slc4a1apE9PX68 744 aa16.57■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Mlh3A0A1Y7VMP7 1443 aa16.57■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Mfap1aC0HKD8 439 aaKnown RBP16.57■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Mfap1bC0HKD9 439 aaKnown RBP16.57■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Tpm3-rs7D3Z2H9 248 aa16.57■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Rapgef6Q5NCJ1 1609 aa16.56■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Q8BT18 775 aa16.56■□□□□ 0.24
Rnf40-202ENSMUST00000205694 CenpjQ569L8 1344 aa16.55■□□□□ 0.24
Rnf40-202ENSMUST00000205694 CrbnQ8C7D2 445 aa16.55■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Map3k5O35099 1380 aa16.55■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Smarce1O54941 411 aaKnown RBP16.54■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Gm156Q58A37 223 aa16.54■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Utp14aQ640M1 767 aaKnown RBP16.53■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Ipo9Q91YE6 1041 aa16.53■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Chmp3Q9CQ10 224 aa16.53■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Ankrd36D3Z4K0 1415 aa16.53■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Fan1Q69ZT1 1020 aa16.53■□□□□ 0.24
Rnf40-202ENSMUST00000205694 Brpf1B2RRD7 1212 aa16.52■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Slx4Q6P1D7 1565 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms