RNA–Protein interactions for RNA: ENSMUST00000177145.7

Cpsf6-208, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 3,819 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-208ENSMUST00000177145 Ptch1Q61115 1434 aa11.59□□□□□ -0.55
Cpsf6-208ENSMUST00000177145 NclP09405 707 aaKnown RBP11.59□□□□□ -0.55
Cpsf6-208ENSMUST00000177145 Fam50aQ9WV03 339 aaKnown RBP11.58□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Cdc42bpgQ80UW5 1551 aa11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 DaxxO35613 739 aa11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Mia2Q91ZV0 1396 aa11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Ltbp4Q8K4G1 1666 aa11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 CatipB9EKE5 520 aa11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Dhx57Q6P5D3 1388 aaKnown RBP11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Vps8Q0P5W1 1427 aa11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Cfap74Q3UY96 1578 aa11.57□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Cdc42bpbQ7TT50 1713 aa11.56□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Bcl9Q9D219 1425 aa11.56□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 RictorQ6QI06 1708 aa11.56□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Fhod3Q76LL6 1578 aa11.55□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Ccer2J3QPU5 274 aa11.55□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Gm1043A0A140LJC2 1431 aa11.55□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Calr4Q3TQS0 420 aa11.54□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Arhgef40Q3UPH7 1517 aa11.54□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Knl1Q66JQ7 1612 aa11.54□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Znf710Q3U288 666 aa11.54□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Stra8P70278 393 aa11.54□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Gm13697A2AK42 830 aa11.53□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Lmod2Q3UHZ5 550 aa11.53□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 4930407I10RikD3Z5T8 1512 aa11.52□□□□□ -0.56
Cpsf6-208ENSMUST00000177145 Cypt1Q8CH20 168 aa11.52□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Hspa5P20029 655 aaKnown RBP11.51□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Phlpp1Q8CHE4 1687 aa11.5□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Iqsec2Q5DU25 1478 aa11.5□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Arhgap5P97393 1501 aa11.5□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 P3h3Q8CG70 732 aa11.49□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Uggt2E9Q4X2 1504 aa11.48□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Arhgap23Q69ZH9 1483 aa11.48□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Trappc8E9PWG2 1437 aa11.48□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Nolc1E9Q5C9 702 aaKnown RBP11.47□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Med14A2ABV5 1459 aaKnown RBP11.47□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Rtl5Q5DTT4 599 aa11.47□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Q8BT18 775 aa11.47□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Nos1Q9Z0J4 1429 aa11.46□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Caskin1Q6P9K8 1431 aa11.46□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Hdac5Q9Z2V6 1113 aa11.46□□□□□ -0.57
Cpsf6-208ENSMUST00000177145 Adcy10Q8C0T9 1614 aa11.46□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 NexmifQ5DTT1 1515 aa11.46□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Xrn1P97789 1719 aaKnown RBP11.46□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Lmtk2Q3TYD6 1471 aa11.46□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Naip5Q9R016 1403 aa11.46□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Dennd4bQ3U1Y4 1499 aa11.45□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Arid3aQ62431 601 aa11.44□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Topbp1Q6ZQF0 1515 aa11.44□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Cfap65Q3V0B4 1847 aa11.44□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Trpm2Q91YD4 1506 aa11.43□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Kdm3bQ6ZPY7 1562 aa11.43□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Slc4a3P16283 1227 aa11.43□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Zbtb7cQ8VCZ7 619 aa11.43□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Adgrb2Q8CGM1 1561 aa11.43□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Smg6P61406 1418 aaKnown RBP11.42□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Mast1Q9R1L5 1570 aa11.42□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Rimbp3Q3V0F0 1606 aa11.42□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 CltcQ68FD5 1675 aaKnown RBP11.42□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Ncoa1P70365 1447 aa11.42□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Abca17E9PX95 1733 aa11.41□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Gli3Q61602 1583 aa11.41□□□□□ -0.58
Cpsf6-208ENSMUST00000177145 Lemd3Q9WU40 921 aa11.39□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Wdr43Q6ZQL4 677 aaKnown RBP11.38□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Ccnb3Q810T2 1396 aa11.38□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Kdm5aQ3UXZ9 1690 aa11.37□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Supt16hQ920B9 1047 aa11.37□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Naip6Q9JIB6 1403 aa11.37□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Sin3aQ60520 1274 aaKnown RBP11.36□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Plcd4Q8K3R3 807 aa11.36□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 PzpQ61838 1495 aa11.35□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 GapdhsQ64467 440 aa11.34□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Chd2E9PZM4 1827 aaKnown RBP11.34□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Znf518aB2RRF6 1478 aaKnown RBP11.34□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Zbtb4Q5F293 982 aa11.34□□□□□ -0.59
Cpsf6-208ENSMUST00000177145 Plch2A2AP18 1501 aa11.33□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Fmn2Q9JL04 1578 aa11.33□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Taok2Q6ZQ29 1240 aa11.33□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 NrdcQ8BHG1 1161 aa11.33□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Gli2Q0VGT2 1544 aa11.33□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Zc3h13E9Q784 1729 aaKnown RBP11.33□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Chic2Q9D9G3 165 aa11.32□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Rfx7F8VPJ6 1459 aa11.32□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Tubgcp6G5E8P0 1769 aa11.31□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Adamts7Q68SA9 1657 aa11.3□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Gemin5Q8BX17 1502 aaKnown RBP11.3□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Tdrd9Q14BI7 1383 aa11.3□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Myo5cE9Q1F5 1742 aa11.29□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Mphosph9A6H5Y1 991 aa11.28□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Slc4a1apE9PX68 744 aa11.28□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Pknox2Q8BG99 474 aa11.28□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Kcna4Q61423 654 aa11.27□□□□□ -0.6
Cpsf6-208ENSMUST00000177145 Washc2Q6PGL7 1334 aa11.27□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Gtf3c3Q3TMP1 882 aa11.27□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Rprd2Q6NXI6 1469 aaKnown RBP11.26□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Irx3P81067 507 aa11.26□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Abcc6Q9R1S7 1498 aa11.25□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 AlkP97793 1621 aa11.25□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Kif21bQ9QXL1 1668 aa11.25□□□□□ -0.61
Cpsf6-208ENSMUST00000177145 Hsp90aa1P07901 733 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms