RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Ecm2Q5FW85 670 aa11.29□□□□□ -0.6
Lig3-211ENSMUST00000173722 Spryd3E9Q9B3 442 aa11.28□□□□□ -0.6
Lig3-211ENSMUST00000173722 Ppm1gQ61074 542 aa11.28□□□□□ -0.6
Lig3-211ENSMUST00000173722 CrebrfQ8CDG5 640 aaKnown RBP11.28□□□□□ -0.6
Lig3-211ENSMUST00000173722 Ccnb3Q810T2 1396 aa11.28□□□□□ -0.6
Lig3-211ENSMUST00000173722 AU015836B2RUM3 263 aa11.27□□□□□ -0.6
Lig3-211ENSMUST00000173722 Tpm2P58774 284 aa11.27□□□□□ -0.6
Lig3-211ENSMUST00000173722 Ripply1Q2WG77 201 aa11.27□□□□□ -0.6
Lig3-211ENSMUST00000173722 PtmsQ9D0J8 101 aaKnown RBP11.27□□□□□ -0.6
Lig3-211ENSMUST00000173722 Cald1E9QA15 768 aaKnown RBP11.27□□□□□ -0.61
Lig3-211ENSMUST00000173722 Gm156Q58A37 223 aa11.27□□□□□ -0.61
Lig3-211ENSMUST00000173722 Mroh2bQ7M6Y6 1581 aa11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 Tnnt1O88346 262 aa11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 U2surpQ6NV83 1029 aaKnown RBP11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 Ofd1Q80Z25 1017 aa11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 Rsph4aQ8BYM7 716 aa11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 Arhgap35Q91YM2 1499 aa11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 Tpd52l1O54818 204 aa11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 Bcl11aQ9QYE3 773 aa11.26□□□□□ -0.61
Lig3-211ENSMUST00000173722 Txndc2Q6P902 515 aa11.25□□□□□ -0.61
Lig3-211ENSMUST00000173722 Krt82Q99M74 516 aa11.25□□□□□ -0.61
Lig3-211ENSMUST00000173722 Tdrd9Q14BI7 1383 aa11.25□□□□□ -0.61
Lig3-211ENSMUST00000173722 Ccdc47Q9D024 483 aaKnown RBP11.25□□□□□ -0.61
Lig3-211ENSMUST00000173722 Gm21969J3QJZ1 289 aa11.25□□□□□ -0.61
Lig3-211ENSMUST00000173722 Q3TQI7 289 aaKnown RBP11.25□□□□□ -0.61
Lig3-211ENSMUST00000173722 TchhA0A0B4J1F9 1599 aa11.24□□□□□ -0.61
Lig3-211ENSMUST00000173722 Becn1O88597 448 aa11.24□□□□□ -0.61
Lig3-211ENSMUST00000173722 RdxP26043 583 aaKnown RBP11.23□□□□□ -0.61
Lig3-211ENSMUST00000173722 Plin1Q8CGN5 517 aa11.23□□□□□ -0.61
Lig3-211ENSMUST00000173722 SynmQ70IV5 1561 aa11.23□□□□□ -0.61
Lig3-211ENSMUST00000173722 Psme1P97371 249 aa11.23□□□□□ -0.61
Lig3-211ENSMUST00000173722 Cnksr2Q80YA9 1032 aa11.23□□□□□ -0.61
Lig3-211ENSMUST00000173722 Ddx11Q6AXC6 880 aa11.22□□□□□ -0.61
Lig3-211ENSMUST00000173722 Mia2Q91ZV0 1396 aa11.22□□□□□ -0.61
Lig3-211ENSMUST00000173722 Cnga1P29974 684 aa11.21□□□□□ -0.61
Lig3-211ENSMUST00000173722 Dbr1Q923B1 550 aa11.21□□□□□ -0.61
Lig3-211ENSMUST00000173722 Plekhh2Q8C115 1491 aa11.21□□□□□ -0.61
Lig3-211ENSMUST00000173722 AqrQ8CFQ3 1481 aaKnown RBP11.21□□□□□ -0.61
Lig3-211ENSMUST00000173722 Ccdc141E9Q8Q6 1531 aa11.21□□□□□ -0.62
Lig3-211ENSMUST00000173722 Igf1rQ60751 1373 aa11.2□□□□□ -0.62
Lig3-211ENSMUST00000173722 Disp1Q3TDN0 1521 aa11.2□□□□□ -0.62
Lig3-211ENSMUST00000173722 Cyb5rlB1AS42 316 aa11.2□□□□□ -0.62
Lig3-211ENSMUST00000173722 Tpm1P58771 284 aa11.2□□□□□ -0.62
Lig3-211ENSMUST00000173722 Ccer1Q9CQL2 403 aa11.2□□□□□ -0.62
Lig3-211ENSMUST00000173722 Dhx16G3X8X0 1044 aaKnown RBP11.2□□□□□ -0.62
Lig3-211ENSMUST00000173722 Kiaa0754Q69ZZ9 979 aa11.2□□□□□ -0.62
Lig3-211ENSMUST00000173722 Ythdc2B2RR83 1445 aaKnown RBP11.19□□□□□ -0.62
Lig3-211ENSMUST00000173722 Pak3Q61036 559 aa11.19□□□□□ -0.62
Lig3-211ENSMUST00000173722 Ipo7Q9EPL8 1038 aaKnown RBP11.19□□□□□ -0.62
Lig3-211ENSMUST00000173722 Sox12Q04890 314 aa11.19□□□□□ -0.62
Lig3-211ENSMUST00000173722 Trak1Q6PD31 939 aa11.19□□□□□ -0.62
Lig3-211ENSMUST00000173722 Brpf1B2RRD7 1212 aa11.18□□□□□ -0.62
Lig3-211ENSMUST00000173722 Ccdc27Q3V036 639 aa11.17□□□□□ -0.62
Lig3-211ENSMUST00000173722 Pip4k2bQ80XI4 416 aa11.17□□□□□ -0.62
Lig3-211ENSMUST00000173722 Map3k1P53349 1493 aa11.17□□□□□ -0.62
Lig3-211ENSMUST00000173722 Card11Q8CIS0 1159 aa11.17□□□□□ -0.62
Lig3-211ENSMUST00000173722 Fam193aQ8CGI1 1231 aaKnown RBP11.16□□□□□ -0.62
Lig3-211ENSMUST00000173722 Podxl2Q8CAE9 603 aa11.16□□□□□ -0.62
Lig3-211ENSMUST00000173722 Spag9Q58A65 1321 aaKnown RBP11.16□□□□□ -0.62
Lig3-211ENSMUST00000173722 Nup155Q99P88 1391 aaKnown RBP11.16□□□□□ -0.62
Lig3-211ENSMUST00000173722 Arhgap5P97393 1501 aa11.16□□□□□ -0.62
Lig3-211ENSMUST00000173722 Gapvd1Q6PAR5 1458 aa11.15□□□□□ -0.62
Lig3-211ENSMUST00000173722 Lrriq1Q0P5X1 1673 aa11.15□□□□□ -0.63
Lig3-211ENSMUST00000173722 Zrsr2Q62377 462 aaKnown RBP11.14□□□□□ -0.63
Lig3-211ENSMUST00000173722 Stk26Q99JT2 416 aa11.14□□□□□ -0.63
Lig3-211ENSMUST00000173722 Smarce1O54941 411 aaKnown RBP11.13□□□□□ -0.63
Lig3-211ENSMUST00000173722 Ccdc96Q9CR92 584 aa11.13□□□□□ -0.63
Lig3-211ENSMUST00000173722 March6Q6ZQ89 909 aa11.13□□□□□ -0.63
Lig3-211ENSMUST00000173722 Pkd2O35245 966 aa11.12□□□□□ -0.63
Lig3-211ENSMUST00000173722 Bcl11bQ99PV8 884 aa11.12□□□□□ -0.63
Lig3-211ENSMUST00000173722 Hap1O35668 628 aa11.11□□□□□ -0.63
Lig3-211ENSMUST00000173722 Hdgfl1Q2VPR5 283 aa11.11□□□□□ -0.63
Lig3-211ENSMUST00000173722 Map3k5O35099 1380 aa11.11□□□□□ -0.63
Lig3-211ENSMUST00000173722 Znf710Q3U288 666 aa11.11□□□□□ -0.63
Lig3-211ENSMUST00000173722 Fam163aQ8CAA5 168 aa11.11□□□□□ -0.63
Lig3-211ENSMUST00000173722 Ppp4r3bQ922R5 820 aa11.11□□□□□ -0.63
Lig3-211ENSMUST00000173722 Gpatch11Q3UFS4 262 aa11.11□□□□□ -0.63
Lig3-211ENSMUST00000173722 Tmco5bQ80X59 307 aa11.1□□□□□ -0.63
Lig3-211ENSMUST00000173722 B4galnt3Q6L8S8 986 aa11.1□□□□□ -0.63
Lig3-211ENSMUST00000173722 Dnttip2Q8R2M2 758 aaKnown RBP11.1□□□□□ -0.63
Lig3-211ENSMUST00000173722 Nap1l2P51860 460 aa11.1□□□□□ -0.63
Lig3-211ENSMUST00000173722 Pdcl3Q8BVF2 240 aa11.1□□□□□ -0.63
Lig3-211ENSMUST00000173722 Gabpb2P81069 414 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Afap1Q80YS6 731 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Birc3O08863 600 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Fbln2P37889 1221 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Evc2Q8K1G2 1220 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Kcnn1Q9EQR3 537 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Trim30aP15533 496 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Cplx2P84086 134 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 Ccp110Q7TSH4 1004 aa11.09□□□□□ -0.63
Lig3-211ENSMUST00000173722 A0A1L1SQF0 893 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 Mphosph9A6H5Y1 991 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 Samd9lQ69Z37 1561 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 TnnQ80Z71 1560 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 A2mQ6GQT1 1474 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 Abcc1O35379 1528 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 Drc7Q6V3W6 876 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 Smc4Q8CG47 1286 aa11.08□□□□□ -0.64
Lig3-211ENSMUST00000173722 Fnbp4Q6ZQ03 1031 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms