RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Mapk8ip2Q9ERE9 830 aa15.2■□□□□ 0.02
Lig3-210ENSMUST00000173347 Pde4cQ3UEI1 686 aa15.19■□□□□ 0.02
Lig3-210ENSMUST00000173347 Hdac5Q9Z2V6 1113 aa15.18■□□□□ 0.02
Lig3-210ENSMUST00000173347 Rock1P70335 1354 aa15.17■□□□□ 0.02
Lig3-210ENSMUST00000173347 Atp7aQ64430 1491 aa15.16■□□□□ 0.02
Lig3-210ENSMUST00000173347 Usp54Q8BL06 1588 aaKnown RBP15.16■□□□□ 0.02
Lig3-210ENSMUST00000173347 Kif1bQ60575 1816 aaKnown RBP15.16■□□□□ 0.02
Lig3-210ENSMUST00000173347 Ak9G3UYQ4 1894 aa15.16■□□□□ 0.02
Lig3-210ENSMUST00000173347 Abca17E9PX95 1733 aa15.16■□□□□ 0.02
Lig3-210ENSMUST00000173347 Myom3A2ABU4 1439 aa15.16■□□□□ 0.02
Lig3-210ENSMUST00000173347 Nsd2Q8BVE8 1365 aa15.16■□□□□ 0.02
Lig3-210ENSMUST00000173347 Dot1lQ6XZL8 1540 aa15.15■□□□□ 0.02
Lig3-210ENSMUST00000173347 Adgrl3Q80TS3 1537 aa15.14■□□□□ 0.01
Lig3-210ENSMUST00000173347 Mbd5B1AYB6 1498 aa15.14■□□□□ 0.01
Lig3-210ENSMUST00000173347 OvosQ3UU35 1456 aa15.14■□□□□ 0.01
Lig3-210ENSMUST00000173347 Kif3bQ61771 747 aa15.14■□□□□ 0.01
Lig3-210ENSMUST00000173347 Dapk1Q80YE7 1442 aa15.14■□□□□ 0.01
Lig3-210ENSMUST00000173347 Nos1Q9Z0J4 1429 aa15.14■□□□□ 0.01
Lig3-210ENSMUST00000173347 Xrn1P97789 1719 aaKnown RBP15.14■□□□□ 0.01
Lig3-210ENSMUST00000173347 Robo2Q7TPD3 1470 aa15.13■□□□□ 0.01
Lig3-210ENSMUST00000173347 ShprhQ7TPQ3 1674 aa15.12■□□□□ 0.01
Lig3-210ENSMUST00000173347 Grwd1Q810D6 446 aaKnown RBP15.12■□□□□ 0.01
Lig3-210ENSMUST00000173347 Mug2P28666 1451 aa15.11■□□□□ 0.01
Lig3-210ENSMUST00000173347 Cwc22Q8C5N3 908 aaKnown RBP15.11■□□□□ 0.01
Lig3-210ENSMUST00000173347 Ppip5k1A2ARP1 1436 aa15.1■□□□□ 0.01
Lig3-210ENSMUST00000173347 Ncoa1P70365 1447 aa15.1■□□□□ 0.01
Lig3-210ENSMUST00000173347 Rundc1Q0VDN7 615 aa15.1■□□□□ 0.01
Lig3-210ENSMUST00000173347 Znf518aB2RRF6 1478 aaKnown RBP15.1■□□□□ 0.01
Lig3-210ENSMUST00000173347 Card11Q8CIS0 1159 aa15.09■□□□□ 0.01
Lig3-210ENSMUST00000173347 Cpsf1Q9EPU4 1441 aaKnown RBP15.09■□□□□ 0.01
Lig3-210ENSMUST00000173347 Washc2Q6PGL7 1334 aa15.09■□□□□ 0.01
Lig3-210ENSMUST00000173347 Polr3aB2RXC6 1390 aa15.08■□□□□ 0
Lig3-210ENSMUST00000173347 Ylpm1Q9R0I7 1386 aaKnown RBP15.08■□□□□ 0
Lig3-210ENSMUST00000173347 Tarbp1E9Q368 1579 aa15.07■□□□□ 0
Lig3-210ENSMUST00000173347 Kdm5cP41230 1554 aa15.06■□□□□ 0
Lig3-210ENSMUST00000173347 Atp10aO54827 1508 aa15.06■□□□□ 0
Lig3-210ENSMUST00000173347 Erich6D3Z6S9 713 aa15.06■□□□□ 0
Lig3-210ENSMUST00000173347 Myo5cE9Q1F5 1742 aa15.05■□□□□ 0
Lig3-210ENSMUST00000173347 Edc4Q3UJB9 1406 aaKnown RBP15.05■□□□□ -0
Lig3-210ENSMUST00000173347 Cdk13Q69ZA1 1511 aaKnown RBP15.04■□□□□ -0
Lig3-210ENSMUST00000173347 Iqgap1Q9JKF1 1657 aaKnown RBP15.04■□□□□ -0
Lig3-210ENSMUST00000173347 RalgapbQ8BQZ4 1484 aa15.04■□□□□ -0
Lig3-210ENSMUST00000173347 Mroh3A0A1D5RM54 893 aa15.04■□□□□ -0
Lig3-210ENSMUST00000173347 Plch2A2AP18 1501 aa15.04■□□□□ -0
Lig3-210ENSMUST00000173347 AglF8VPN4 1532 aa15.04■□□□□ -0
Lig3-210ENSMUST00000173347 Ppp1r18Q8BQ30 594 aa15.03■□□□□ -0
Lig3-210ENSMUST00000173347 Naip6Q9JIB6 1403 aa15.02■□□□□ -0
Lig3-210ENSMUST00000173347 Clasp1Q80TV8 1535 aaKnown RBP15.02■□□□□ -0
Lig3-210ENSMUST00000173347 Depdc5P61460 1591 aa15.02□□□□□ -0.01
Lig3-210ENSMUST00000173347 Smg6P61406 1418 aaKnown RBP15.02□□□□□ -0.01
Lig3-210ENSMUST00000173347 Ptch1Q61115 1434 aa15.01□□□□□ -0.01
Lig3-210ENSMUST00000173347 Ifit1bl1D3Z6F0 470 aa15□□□□□ -0.01
Lig3-210ENSMUST00000173347 Stra8P70278 393 aa15□□□□□ -0.01
Lig3-210ENSMUST00000173347 Anks4bQ8K3X6 423 aa15□□□□□ -0.01
Lig3-210ENSMUST00000173347 Gli2Q0VGT2 1544 aa15□□□□□ -0.01
Lig3-210ENSMUST00000173347 Ttc21bQ0HA38 1315 aa15□□□□□ -0.01
Lig3-210ENSMUST00000173347 Rock2P70336 1388 aa14.99□□□□□ -0.01
Lig3-210ENSMUST00000173347 Topbp1Q6ZQF0 1515 aa14.99□□□□□ -0.01
Lig3-210ENSMUST00000173347 Fndc1E9Q043 1732 aa14.98□□□□□ -0.01
Lig3-210ENSMUST00000173347 Cdc42bpgQ80UW5 1551 aa14.98□□□□□ -0.01
Lig3-210ENSMUST00000173347 Abca6Q8K441 1624 aa14.98□□□□□ -0.01
Lig3-210ENSMUST00000173347 AnkarA2RT91 1465 aa14.97□□□□□ -0.01
Lig3-210ENSMUST00000173347 Ttbk1Q6PCN3 1308 aa14.97□□□□□ -0.01
Lig3-210ENSMUST00000173347 Plekhg5Q66T02 1073 aa14.97□□□□□ -0.01
Lig3-210ENSMUST00000173347 Uggt2E9Q4X2 1504 aa14.96□□□□□ -0.01
Lig3-210ENSMUST00000173347 Col17a1Q07563 1470 aa14.96□□□□□ -0.01
Lig3-210ENSMUST00000173347 Kiaa0556Q8C753 1610 aa14.96□□□□□ -0.01
Lig3-210ENSMUST00000173347 ErbinQ80TH2 1402 aa14.95□□□□□ -0.02
Lig3-210ENSMUST00000173347 Dip2cE9PWR4 1557 aa14.95□□□□□ -0.02
Lig3-210ENSMUST00000173347 RereQ80TZ9 1558 aa14.95□□□□□ -0.02
Lig3-210ENSMUST00000173347 Abcc6Q9R1S7 1498 aa14.95□□□□□ -0.02
Lig3-210ENSMUST00000173347 Adamts13Q769J6 1426 aa14.94□□□□□ -0.02
Lig3-210ENSMUST00000173347 Ttc37F8VPK0 1563 aa14.93□□□□□ -0.02
Lig3-210ENSMUST00000173347 Tmem131lQ3U3D7 1597 aa14.93□□□□□ -0.02
Lig3-210ENSMUST00000173347 Prex1Q69ZK0 1650 aa14.93□□□□□ -0.02
Lig3-210ENSMUST00000173347 Tulp4Q9JIL5 1547 aa14.93□□□□□ -0.02
Lig3-210ENSMUST00000173347 Stk24Q99KH8 431 aa14.92□□□□□ -0.02
Lig3-210ENSMUST00000173347 Sall3Q62255 1320 aa14.91□□□□□ -0.02
Lig3-210ENSMUST00000173347 Iqgap3F8VQ29 1632 aa14.91□□□□□ -0.02
Lig3-210ENSMUST00000173347 Synj2Q9D2G5 1434 aa14.91□□□□□ -0.02
Lig3-210ENSMUST00000173347 Gm13695A2AK44 830 aa14.91□□□□□ -0.02
Lig3-210ENSMUST00000173347 Slc24a1Q91WD8 1130 aa14.91□□□□□ -0.02
Lig3-210ENSMUST00000173347 Os9Q8K2C7 672 aa14.89□□□□□ -0.03
Lig3-210ENSMUST00000173347 Cul9Q80TT8 1865 aa14.89□□□□□ -0.03
Lig3-210ENSMUST00000173347 Kdm2aP59997 1161 aa14.89□□□□□ -0.03
Lig3-210ENSMUST00000173347 AdgbG3UZ78 1657 aa14.88□□□□□ -0.03
Lig3-210ENSMUST00000173347 Yeats2Q3TUF7 1407 aa14.88□□□□□ -0.03
Lig3-210ENSMUST00000173347 Zbtb4Q5F293 982 aa14.87□□□□□ -0.03
Lig3-210ENSMUST00000173347 Hecw2Q6I6G8 1578 aa14.86□□□□□ -0.03
Lig3-210ENSMUST00000173347 Setd1aE9PYH6 1716 aa14.86□□□□□ -0.03
Lig3-210ENSMUST00000173347 Talpid3E9PV87 1520 aa14.86□□□□□ -0.03
Lig3-210ENSMUST00000173347 Abca8aQ8K442 1620 aa14.85□□□□□ -0.03
Lig3-210ENSMUST00000173347 Cfap65Q3V0B4 1847 aa14.85□□□□□ -0.03
Lig3-210ENSMUST00000173347 Gm20521D3Z5F7 333 aa14.84□□□□□ -0.03
Lig3-210ENSMUST00000173347 Mrs2Q5NCE8 434 aa14.84□□□□□ -0.03
Lig3-210ENSMUST00000173347 Trpm1Q2TV84 1622 aa14.84□□□□□ -0.03
Lig3-210ENSMUST00000173347 Srcin1Q9QWI6 1250 aa14.84□□□□□ -0.03
Lig3-210ENSMUST00000173347 Srpk2O54781 681 aaKnown RBP14.83□□□□□ -0.04
Lig3-210ENSMUST00000173347 AatkQ80YE4 1365 aa14.83□□□□□ -0.04
Lig3-210ENSMUST00000173347 Efcab6Q6P1E8 1516 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms