RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Map3k5O35099 1380 aa20.24■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Slc4a1apE9PX68 744 aa20.24■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Speer4f1Q9D5Q6 258 aa20.24■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 CenpjQ569L8 1344 aa20.23■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Mink1Q9JM52 1308 aa20.23■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Wdr62Q3U3T8 1523 aa20.23■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Gm7298A0A0N4SVU1 1476 aa20.23■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Polr1aO35134 1717 aaKnown RBP20.22■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Pcmtd1P59913 357 aa20.22■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 EspnQ9ET47 871 aa20.22■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Ift140E9PY46 1464 aa20.22■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 MccE9PWI3 1003 aa20.21■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 CadpsQ80TJ1 1355 aa20.21■□□□□ 0.83
Pcdh1-203ENSMUST00000160721 Cabp4Q8VHC5 271 aa20.2■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 NrkQ9R0G8 1455 aa20.19■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Usp40Q8BWR4 1235 aa20.19■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Usp47Q8BY87 1376 aa20.18■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Arhgap5P97393 1501 aa20.18■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Sh3bp5Q9Z131 463 aa20.18■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 MsnP26041 577 aaKnown RBP20.17■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Zscan21Q07231 555 aa20.16■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Pde4cQ3UEI1 686 aa20.16■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Afap1Q80YS6 731 aa20.15■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 ErbinQ80TH2 1402 aa20.15■□□□□ 0.82
Pcdh1-203ENSMUST00000160721 Q3TQI7 289 aaKnown RBP20.14■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Cluap1Q8R3P7 413 aa20.13■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 HnrnpuQ8VEK3 800 aaKnown RBP20.13■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Pibf1E9Q6K3 756 aa20.12■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Stard8Q8K031 1019 aa20.12■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Golga2Q921M4 999 aa20.12■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Cyb5rlB1AS42 316 aa20.11■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Mfap1aC0HKD8 439 aaKnown RBP20.11■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Mfap1bC0HKD9 439 aaKnown RBP20.11■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Taok2Q6ZQ29 1240 aa20.11■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Ipo8Q7TMY7 1010 aa20.11■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Tmco5bQ80X59 307 aa20.11■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Q9D9H8 365 aa20.11■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Zfp644E9QA22 1323 aa20.1■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 PtprkP35822 1457 aa20.09■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Prdm16A2A935 1275 aa20.09■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Crocc2F6XLV1 1638 aa20.09■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Rassf8Q8CJ96 419 aa20.09■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 Mak16Q8BGS0 296 aaKnown RBP20.08■□□□□ 0.81
Pcdh1-203ENSMUST00000160721 EprsQ8CGC7 1512 aaKnown RBP20.08■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Nolc1E9Q5C9 702 aaKnown RBP20.08■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 ChgaP26339 463 aaKnown RBP20.07■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Ccdc141E9Q8Q6 1531 aa20.07■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Gm973E9Q295 1059 aa20.06■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Anapc15P60007 132 aa20.06■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Ciz1Q8VEH2 845 aa20.06■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Gm21190A0A0G2JGJ6 266 aa20.06■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Znf330Q922H9 316 aa20.06■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Ppm1fQ8CGA0 452 aa20.06■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 PtmsQ9D0J8 101 aaKnown RBP20.06■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Atf3Q60765 181 aa20.05■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Eif4g2Q62448 906 aaKnown RBP20.05■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Fyb1O35601 819 aa20.05■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Neo1P97798 1493 aa20.04■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 CgnP59242 1191 aa20.04■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Pank3Q8R2W9 370 aa20.04■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Cux1P53564 1515 aa20.04■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Nsd2Q8BVE8 1365 aa20.04■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Rrp12Q6P5B0 1295 aaKnown RBP20.04■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Mroh2bQ7M6Y6 1581 aa20.03■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Calcoco2A2A6M5 331 aa20.02■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 Evi5lH3BKQ3 813 aa20.02■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 GorabQ8BRM2 368 aa20.02■□□□□ 0.8
Pcdh1-203ENSMUST00000160721 SlkO54988 1233 aa20.01■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Sart3Q9JLI8 962 aaKnown RBP20.01■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Camsap1A2AHC3 1581 aa20■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 CrbnQ8C7D2 445 aa20■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Inpp5dQ9ES52 1191 aa19.98■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Nol10Q5RJG1 687 aaKnown RBP19.98■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Iffo2Q8R2V2 512 aa19.98■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Tsen2Q6P7W5 460 aa19.97■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Gtf3c3Q3TMP1 882 aa19.97■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Kiaa0754Q69ZZ9 979 aa19.97■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Naip1Q9QWK5 1403 aa19.97■□□□□ 0.79
Pcdh1-203ENSMUST00000160721 Gpatch11Q3UFS4 262 aa19.95■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Puf60Q3UEB3 564 aaKnown RBP19.95■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Atp2b2Q9R0K7 1198 aa19.94■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Sirt1Q923E4 737 aa19.94■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Stk31Q99MW1 1018 aa19.94■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Fam163aQ8CAA5 168 aa19.94■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Ksr2Q3UVC0 959 aa19.93■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 CrebrfQ8CDG5 640 aaKnown RBP19.91■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 RdxP26043 583 aaKnown RBP19.9■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Fam184bQ0KK56 942 aa19.9■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Chrna2Q91X60 512 aa19.9■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 TchhA0A0B4J1F9 1599 aa19.9■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Gsto1O09131 240 aa19.9■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Cd109Q8R422 1442 aa19.9■□□□□ 0.78
Pcdh1-203ENSMUST00000160721 Igf1rQ60751 1373 aa19.89■□□□□ 0.77
Pcdh1-203ENSMUST00000160721 MecomP14404 1042 aa19.89■□□□□ 0.77
Pcdh1-203ENSMUST00000160721 Grin2aP35436 1464 aa19.88■□□□□ 0.77
Pcdh1-203ENSMUST00000160721 Map3k1P53349 1493 aa19.88■□□□□ 0.77
Pcdh1-203ENSMUST00000160721 Kif7B7ZNG0 1348 aa19.88■□□□□ 0.77
Pcdh1-203ENSMUST00000160721 Dapk1Q80YE7 1442 aa19.88■□□□□ 0.77
Pcdh1-203ENSMUST00000160721 Arap1Q4LDD4 1452 aa19.87■□□□□ 0.77
Pcdh1-203ENSMUST00000160721 Chmp3Q9CQ10 224 aa19.87■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms