RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Nos1Q9Z0J4 1429 aa36,42■■■■□ 3,42
Tpm1-216ENSMUST00000113707 Neurod1Q60867 357 aa36,41■■■■□ 3,42
Tpm1-216ENSMUST00000113707 Pde4cQ3UEI1 686 aa36,4■■■■□ 3,42
Tpm1-216ENSMUST00000113707 Robo2Q7TPD3 1470 aa36,4■■■■□ 3,42
Tpm1-216ENSMUST00000113707 Kif1bQ60575 1816 aaKnown RBP36,4■■■■□ 3,42
Tpm1-216ENSMUST00000113707 ShprhQ7TPQ3 1674 aa36,38■■■■□ 3,41
Tpm1-216ENSMUST00000113707 Dot1lQ6XZL8 1540 aa36,37■■■■□ 3,41
Tpm1-216ENSMUST00000113707 OvosQ3UU35 1456 aa36,37■■■■□ 3,41
Tpm1-216ENSMUST00000113707 Rgl3Q3UYI5 709 aa36,36■■■■□ 3,41
Tpm1-216ENSMUST00000113707 Atp7aQ64430 1491 aa36,35■■■■□ 3,41
Tpm1-216ENSMUST00000113707 Rock1P70335 1354 aa36,34■■■■□ 3,41
Tpm1-216ENSMUST00000113707 Mbd5B1AYB6 1498 aa36,34■■■■□ 3,41
Tpm1-216ENSMUST00000113707 Znf518aB2RRF6 1478 aaKnown RBP36,3■■■■□ 3,4
Tpm1-216ENSMUST00000113707 Kdm5cP41230 1554 aa36,3■■■■□ 3,4
Tpm1-216ENSMUST00000113707 Hnrnpul2Q00PI9 745 aaKnown RBP36,3■■■■□ 3,4
Tpm1-216ENSMUST00000113707 AglF8VPN4 1532 aa36,28■■■■□ 3,4
Tpm1-216ENSMUST00000113707 Nsd2Q8BVE8 1365 aa36,28■■■■□ 3,4
Tpm1-216ENSMUST00000113707 Myom3A2ABU4 1439 aa36,27■■■■□ 3,4
Tpm1-216ENSMUST00000113707 Clasp1Q80TV8 1535 aaKnown RBP36,27■■■■□ 3,4
Tpm1-216ENSMUST00000113707 Ppip5k1A2ARP1 1436 aa36,25■■■■□ 3,39
Tpm1-216ENSMUST00000113707 Myo5cE9Q1F5 1742 aa36,24■■■■□ 3,39
Tpm1-216ENSMUST00000113707 Atp10aO54827 1508 aa36,24■■■■□ 3,39
Tpm1-216ENSMUST00000113707 Sin3aQ60520 1274 aaKnown RBP36,24■■■■□ 3,39
Tpm1-216ENSMUST00000113707 Hdac5Q9Z2V6 1113 aa36,22■■■■□ 3,39
Tpm1-216ENSMUST00000113707 Col17a1Q07563 1470 aa36,21■■■■□ 3,39
Tpm1-216ENSMUST00000113707 Kif3bQ61771 747 aa36,21■■■■□ 3,39
Tpm1-216ENSMUST00000113707 Mug2P28666 1451 aa36,19■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Tarbp1E9Q368 1579 aa36,17■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Depdc5P61460 1591 aa36,17■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Kiaa0556Q8C753 1610 aa36,16■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Nop58Q6DFW4 536 aaKnown RBP36,16■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Cpsf1Q9EPU4 1441 aaKnown RBP36,16■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Plch2A2AP18 1501 aa36,16■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Dapk1Q80YE7 1442 aa36,15■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Iqgap1Q9JKF1 1657 aaKnown RBP36,15■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Ylpm1Q9R0I7 1386 aaKnown RBP36,14■■■■□ 3,38
Tpm1-216ENSMUST00000113707 Topbp1Q6ZQF0 1515 aa36,13■■■■□ 3,37
Tpm1-216ENSMUST00000113707 Washc2Q6PGL7 1334 aa36,11■■■■□ 3,37
Tpm1-216ENSMUST00000113707 Polr3aB2RXC6 1390 aa36,11■■■■□ 3,37
Tpm1-216ENSMUST00000113707 Ncoa1P70365 1447 aa36,1■■■■□ 3,37
Tpm1-216ENSMUST00000113707 Edc4Q3UJB9 1406 aaKnown RBP36,1■■■■□ 3,37
Tpm1-216ENSMUST00000113707 Fndc1E9Q043 1732 aa36,1■■■■□ 3,37
Tpm1-216ENSMUST00000113707 Ptch1Q61115 1434 aa36,07■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Mapk8ip2Q9ERE9 830 aa36,07■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Ttc37F8VPK0 1563 aa36,06■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Cdc42bpgQ80UW5 1551 aa36,06■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Grwd1Q810D6 446 aaKnown RBP36,04■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Cdk13Q69ZA1 1511 aaKnown RBP36,03■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Rundc1Q0VDN7 615 aa36,03■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Gli2Q0VGT2 1544 aa36,02■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Ppp1r18Q8BQ30 594 aa36,02■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Cwc22Q8C5N3 908 aaKnown RBP36,02■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Dip2cE9PWR4 1557 aa36,02■■■■□ 3,36
Tpm1-216ENSMUST00000113707 RereQ80TZ9 1558 aa36,02■■■■□ 3,36
Tpm1-216ENSMUST00000113707 Tmem131lQ3U3D7 1597 aa36,01■■■■□ 3,35
Tpm1-216ENSMUST00000113707 Abca6Q8K441 1624 aa36■■■■□ 3,35
Tpm1-216ENSMUST00000113707 AnkarA2RT91 1465 aa36■■■■□ 3,35
Tpm1-216ENSMUST00000113707 RalgapbQ8BQZ4 1484 aa36■■■■□ 3,35
Tpm1-216ENSMUST00000113707 Naip6Q9JIB6 1403 aa35,98■■■■□ 3,35
Tpm1-216ENSMUST00000113707 Uggt2E9Q4X2 1504 aa35,98■■■■□ 3,35
Tpm1-216ENSMUST00000113707 Card11Q8CIS0 1159 aa35,98■■■■□ 3,35
Tpm1-216ENSMUST00000113707 Ttc21bQ0HA38 1315 aa35,98■■■■□ 3,35
Tpm1-216ENSMUST00000113707 Prex1Q69ZK0 1650 aa35,93■■■■□ 3,34
Tpm1-216ENSMUST00000113707 Adamts13Q769J6 1426 aa35,91■■■■□ 3,34
Tpm1-216ENSMUST00000113707 AdgbG3UZ78 1657 aa35,9■■■■□ 3,34
Tpm1-216ENSMUST00000113707 Mroh3A0A1D5RM54 893 aa35,88■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Synj2Q9D2G5 1434 aa35,88■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Cul9Q80TT8 1865 aa35,88■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Erich6D3Z6S9 713 aa35,88■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Iqgap3F8VQ29 1632 aa35,86■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Ttbk1Q6PCN3 1308 aa35,84■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Abcc6Q9R1S7 1498 aa35,83■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Hecw2Q6I6G8 1578 aa35,83■■■■□ 3,33
Tpm1-216ENSMUST00000113707 Ifit1bl1D3Z6F0 470 aa35,82■■■■□ 3,32
Tpm1-216ENSMUST00000113707 Tulp4Q9JIL5 1547 aa35,81■■■■□ 3,32
Tpm1-216ENSMUST00000113707 Trpm1Q2TV84 1622 aa35,81■■■■□ 3,32
Tpm1-216ENSMUST00000113707 Rock2P70336 1388 aa35,79■■■■□ 3,32
Tpm1-216ENSMUST00000113707 Plekhg5Q66T02 1073 aa35,79■■■■□ 3,32
Tpm1-216ENSMUST00000113707 Yeats2Q3TUF7 1407 aa35,79■■■■□ 3,32
Tpm1-216ENSMUST00000113707 Smg6P61406 1418 aaKnown RBP35,78■■■■□ 3,32
Tpm1-216ENSMUST00000113707 ErbinQ80TH2 1402 aa35,78■■■■□ 3,32
Tpm1-216ENSMUST00000113707 Abca8aQ8K442 1620 aa35,74■■■■□ 3,31
Tpm1-216ENSMUST00000113707 Akap12Q9WTQ5 1684 aa35,73■■■■□ 3,31
Tpm1-216ENSMUST00000113707 Sall3Q62255 1320 aa35,71■■■■□ 3,31
Tpm1-216ENSMUST00000113707 Tecpr2Q3UH45 1423 aa35,68■■■■□ 3,3
Tpm1-216ENSMUST00000113707 Stk24Q99KH8 431 aa35,65■■■■□ 3,3
Tpm1-216ENSMUST00000113707 Talpid3E9PV87 1520 aa35,65■■■■□ 3,3
Tpm1-216ENSMUST00000113707 Adgrb3Q80ZF8 1522 aa35,64■■■■□ 3,3
Tpm1-216ENSMUST00000113707 Setd1aE9PYH6 1716 aa35,64■■■■□ 3,3
Tpm1-216ENSMUST00000113707 Cfap65Q3V0B4 1847 aa35,63■■■■□ 3,3
Tpm1-216ENSMUST00000113707 Efcab6Q6P1E8 1516 aa35,62■■■■□ 3,29
Tpm1-216ENSMUST00000113707 Adamts7Q68SA9 1657 aa35,62■■■■□ 3,29
Tpm1-216ENSMUST00000113707 Ehbp1l1Q99MS7 1716 aa35,62■■■■□ 3,29
Tpm1-216ENSMUST00000113707 Ino80Q6ZPV2 1559 aa35,61■■■■□ 3,29
Tpm1-216ENSMUST00000113707 Prdm2A2A7B5 1709 aaKnown RBP35,61■■■■□ 3,29
Tpm1-216ENSMUST00000113707 AatkQ80YE4 1365 aa35,59■■■■□ 3,29
Tpm1-216ENSMUST00000113707 Cep152A2AUM9 1736 aaKnown RBP35,59■■■■□ 3,29
Tpm1-216ENSMUST00000113707 Zmym4A2A791 1549 aaKnown RBP35,56■■■■□ 3,28
Tpm1-216ENSMUST00000113707 Anks4bQ8K3X6 423 aa35,54■■■■□ 3,28
Tpm1-216ENSMUST00000113707 Rims1Q99NE5 1463 aa35,53■■■■□ 3,28
Retrieved 100 of 22,080 RNA–protein pairs in 24,9 ms