RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Tsen2Q6P7W5 460 aa8.35□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Usp47Q8BY87 1376 aa8.35□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Carmil1Q6EDY6 1374 aa8.35□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Pank3Q8R2W9 370 aa8.35□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Rapgef2Q8CHG7 1496 aa8.34□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Nolc1E9Q5C9 702 aaKnown RBP8.34□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Gpatch11Q3UFS4 262 aa8.34□□□□□ -1.07
Scn8a-205ENSMUST00000108910 HdgfP51859 237 aaKnown RBP8.34□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Mical1Q8VDP3 1048 aa8.34□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Ccer1Q9CQL2 403 aa8.34□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Slc4a10Q5DTL9 1118 aa8.34□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Stard8Q8K031 1019 aa8.33□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Cgnl1Q6AW69 1298 aa8.33□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Smg6P61406 1418 aaKnown RBP8.33□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Trim30aP15533 496 aa8.33□□□□□ -1.08
Scn8a-205ENSMUST00000108910 MlecQ6ZQI3 291 aaKnown RBP8.33□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Ccdc60Q8C4J0 545 aa8.33□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Sart1Q9Z315 806 aaKnown RBP8.32□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Tpd52l1O54818 204 aa8.32□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Utp14aQ640M1 767 aaKnown RBP8.32□□□□□ -1.08
Scn8a-205ENSMUST00000108910 UacaQ8CGB3 1411 aa8.32□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Rock1P70335 1354 aa8.32□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Stk31Q99MW1 1018 aa8.32□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Rsph3aQ3UFY4 516 aa8.32□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Inpp5dQ9ES52 1191 aa8.31□□□□□ -1.08
Scn8a-205ENSMUST00000108910 CftrP26361 1476 aa8.31□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Ap3b2Q9JME5 1082 aa8.31□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Cspp1B2RX88 1205 aa8.31□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Ddrgk1Q80WW9 315 aa8.3□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Becn1O88597 448 aa8.3□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Sf3a1Q8K4Z5 791 aaKnown RBP8.3□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Tpm3P21107 285 aaKnown RBP8.3□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Pak3Q61036 559 aa8.3□□□□□ -1.08
Scn8a-205ENSMUST00000108910 St18Q80TY4 1045 aa8.29□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Ccdc47Q9D024 483 aaKnown RBP8.29□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Isy1Q69ZQ2 285 aaKnown RBP8.29□□□□□ -1.08
Scn8a-205ENSMUST00000108910 VgfQ0VGU4 617 aa8.29□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Cabp4Q8VHC5 271 aa8.29□□□□□ -1.08
Scn8a-205ENSMUST00000108910 SetQ9EQU5 289 aaKnown RBP8.29□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Filip1lQ6P6L0 1131 aa8.28□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Kif7B7ZNG0 1348 aa8.28□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Taok2Q6ZQ29 1240 aa8.28□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Cc2d1aQ8K1A6 943 aa8.28□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Sycp2Q9CUU3 1500 aa8.28□□□□□ -1.08
Scn8a-205ENSMUST00000108910 Fam184bQ0KK56 942 aa8.27□□□□□ -1.08
Scn8a-205ENSMUST00000108910 G3bp1P97855 465 aaKnown RBP8.27□□□□□ -1.09
Scn8a-205ENSMUST00000108910 4933402E13RikQ9D4D2 429 aa8.27□□□□□ -1.09
Scn8a-205ENSMUST00000108910 GsdmaQ9EST1 446 aa8.27□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Synj1Q8CHC4 1574 aa8.27□□□□□ -1.09
Scn8a-205ENSMUST00000108910 AppP12023 770 aa8.27□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Rsph4aQ8BYM7 716 aa8.27□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Usp40Q8BWR4 1235 aa8.27□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Nap1l3Q794H2 544 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Vps53Q8CCB4 832 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Ubap1lG3UW59 384 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Mre11Q61216 706 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Rfx1P48377 963 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Mink1Q9JM52 1308 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Gtf3c3Q3TMP1 882 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Shq1Q7TMX5 569 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Ush1cQ9ES64 910 aa8.26□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Dapk1Q80YE7 1442 aa8.25□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Triml2E9PW10 424 aa8.25□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Gm21969J3QJZ1 289 aa8.25□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Casq1O09165 405 aa8.25□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Eif2s2Q99L45 331 aaKnown RBP8.24□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Cecr2E9Q2Z1 1453 aa8.24□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Esx1O88933 382 aa8.24□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Zscan10Q3URR7 782 aa8.24□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Ralbp1Q62172 648 aa8.24□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Ak7Q9D2H2 614 aa8.24□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Sh3bgrQ9WUZ7 214 aa8.24□□□□□ -1.09
Scn8a-205ENSMUST00000108910 BccipQ9CWI3 316 aa8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Tceal9Q9DD24 104 aa8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Phldb1Q6PDH0 1371 aaKnown RBP8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 KinQ8K339 391 aa8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Kri1Q8VDQ9 704 aaKnown RBP8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Utp3Q9JI13 469 aaKnown RBP8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Trim58Q5NCC9 485 aa8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Tomm22Q9CPQ3 142 aa8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Glipr1l2Q9CQ35 332 aa8.23□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Tpm1P58771 284 aa8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Tpm4Q6IRU2 248 aa8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Srek1Q8BZX4 494 aaKnown RBP8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Krt82Q99M74 516 aa8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Smc4Q8CG47 1286 aa8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Cc2d2bA0A286YDU8 1405 aa8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 WrnO09053 1401 aa8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Rab11fip3Q8CHD8 1047 aa8.22□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Gm21190A0A0G2JGJ6 266 aa8.21□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Kif16bB1AVY7 1312 aa8.21□□□□□ -1.09
Scn8a-205ENSMUST00000108910 LrpprcQ6PB66 1392 aaKnown RBP8.21□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Tpm2P58774 284 aa8.21□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Polr3gQ6NXY9 223 aa8.21□□□□□ -1.09
Scn8a-205ENSMUST00000108910 Phactr2B1AVP0 632 aa8.21□□□□□ -1.1
Scn8a-205ENSMUST00000108910 Smarca2Q6DIC0 1577 aa8.21□□□□□ -1.1
Scn8a-205ENSMUST00000108910 Chmp7Q8R1T1 451 aa8.21□□□□□ -1.1
Scn8a-205ENSMUST00000108910 Drc7Q6V3W6 876 aa8.21□□□□□ -1.1
Scn8a-205ENSMUST00000108910 Gabpb2P81069 414 aa8.2□□□□□ -1.1
Scn8a-205ENSMUST00000108910 Ftsj3Q9DBE9 838 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 69.8 ms