RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Ccdc146E9Q9F7 977 aa12.52□□□□□ -0.41
Smarca1-202ENSMUST00000088973 HdgfP51859 237 aaKnown RBP12.52□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Esx1O88933 382 aa12.51□□□□□ -0.41
Smarca1-202ENSMUST00000088973 CrebrfQ8CDG5 640 aaKnown RBP12.51□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Fam184bQ0KK56 942 aa12.5□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Usp40Q8BWR4 1235 aa12.5□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Ccdc60Q8C4J0 545 aa12.5□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Synj1Q8CHC4 1574 aa12.5□□□□□ -0.41
Smarca1-202ENSMUST00000088973 WrnO09053 1401 aa12.5□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Q8BT18 775 aa12.5□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Chmp3Q9CQ10 224 aa12.5□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Rock1P70335 1354 aa12.49□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Dhx29Q6PGC1 1365 aaKnown RBP12.49□□□□□ -0.41
Smarca1-202ENSMUST00000088973 MlecQ6ZQI3 291 aaKnown RBP12.49□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Stk31Q99MW1 1018 aa12.49□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Atad2bE9Q166 1460 aaKnown RBP12.48□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Cabp4Q8VHC5 271 aa12.48□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Kif7B7ZNG0 1348 aa12.48□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Tdrd9Q14BI7 1383 aa12.48□□□□□ -0.41
Smarca1-202ENSMUST00000088973 GsdmaQ9EST1 446 aa12.48□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Rsph4aQ8BYM7 716 aa12.47□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Shq1Q7TMX5 569 aa12.47□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Ap3b2Q9JME5 1082 aa12.46□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Smarca2Q6DIC0 1577 aa12.46□□□□□ -0.41
Smarca1-202ENSMUST00000088973 SlkO54988 1233 aa12.46□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Zscan10Q3URR7 782 aa12.46□□□□□ -0.41
Smarca1-202ENSMUST00000088973 Mink1Q9JM52 1308 aa12.45□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Dapk1Q80YE7 1442 aa12.45□□□□□ -0.42
Smarca1-202ENSMUST00000088973 G3bp1P97855 465 aaKnown RBP12.45□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Slc4a10Q5DTL9 1118 aa12.45□□□□□ -0.42
Smarca1-202ENSMUST00000088973 R3hcc1Q8BSI6 488 aa12.45□□□□□ -0.42
Smarca1-202ENSMUST00000088973 MsnP26041 577 aaKnown RBP12.44□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Cc2d1aQ8K1A6 943 aa12.44□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Ralbp1Q62172 648 aa12.44□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Smarce1O54941 411 aaKnown RBP12.42□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Atp6v1dP57746 247 aa12.42□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Cgnl1Q6AW69 1298 aa12.42□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Jph4Q80WT0 628 aa12.42□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Pak3Q61036 559 aa12.41□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Rpgrip1lQ8CG73 1264 aa12.4□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Ylpm1Q9R0I7 1386 aaKnown RBP12.4□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Tpm3-rs7D3Z2H9 248 aa12.4□□□□□ -0.42
Smarca1-202ENSMUST00000088973 Cc2d2bA0A286YDU8 1405 aa12.39□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Dnai2A2AC93 623 aa12.39□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Rsph3aQ3UFY4 516 aa12.38□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Trim58Q5NCC9 485 aa12.38□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Calcoco2A2A6M5 331 aa12.37□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Ccer1Q9CQL2 403 aa12.37□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Zfp644E9QA22 1323 aa12.37□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Rfx1P48377 963 aa12.37□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Cald1E9QA15 768 aaKnown RBP12.37□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Ccdc30Q8BVF4 654 aa12.37□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Eif2s2Q99L45 331 aaKnown RBP12.37□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Gpatch11Q3UFS4 262 aa12.36□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Ak7Q9D2H2 614 aa12.36□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Tnnt2P50752 301 aa12.36□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Triml2E9PW10 424 aa12.36□□□□□ -0.43
Smarca1-202ENSMUST00000088973 RdxP26043 583 aaKnown RBP12.36□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Gm21190A0A0G2JGJ6 266 aa12.35□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Filip1lQ6P6L0 1131 aa12.35□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Rrp12Q6P5B0 1295 aaKnown RBP12.35□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Mical1Q8VDP3 1048 aa12.35□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Smarca4Q3TKT4 1613 aaKnown RBP12.35□□□□□ -0.43
Smarca1-202ENSMUST00000088973 Soga1E1U8D0 1418 aa12.35□□□□□ -0.43
Smarca1-202ENSMUST00000088973 St18Q80TY4 1045 aa12.35□□□□□ -0.43
Smarca1-202ENSMUST00000088973 ErbinQ80TH2 1402 aa12.33□□□□□ -0.43
Smarca1-202ENSMUST00000088973 AppP12023 770 aa12.33□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Sf3a1Q8K4Z5 791 aaKnown RBP12.33□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Kiaa0754Q69ZZ9 979 aa12.33□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Pde4cQ3UEI1 686 aa12.33□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Ddrgk1Q80WW9 315 aa12.32□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Pank1Q8K4K6 548 aa12.32□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Mre11Q61216 706 aa12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Znf710Q3U288 666 aa12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Usp16Q99LG0 825 aa12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Ankrd36D3Z4K0 1415 aa12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Cspp1B2RX88 1205 aa12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Casq1O09165 405 aa12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Puf60Q3UEB3 564 aaKnown RBP12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Q7TT23 1179 aa12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 KarsQ99MN1 595 aaKnown RBP12.31□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Nectin2P32507 530 aa12.3□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Smc4Q8CG47 1286 aa12.3□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Sh3bgrQ9WUZ7 214 aa12.3□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Pabpn1Q8CCS6 302 aaKnown RBP12.3□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Nsd2Q8BVE8 1365 aa12.3□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Gsto1O09131 240 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Becn1O88597 448 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Trim30aP15533 496 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Ric3Q8BPM6 367 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Q9D2X8 372 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 VgfQ0VGU4 617 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Phactr2B1AVP0 632 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Chmp7Q8R1T1 451 aa12.29□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Nap1l3Q794H2 544 aa12.28□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Efcab5A0JP43 1406 aa12.28□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Gnai1B2RSH2 354 aa12.28□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Nutm1Q8BHP2 1126 aa12.28□□□□□ -0.44
Smarca1-202ENSMUST00000088973 4933402E13RikQ9D4D2 429 aa12.28□□□□□ -0.44
Smarca1-202ENSMUST00000088973 Gnai3Q9DC51 354 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms