RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Ankrd36D3Z4K0 1415 aa12.24□□□□□ -0.45
Col4a4-201ENSMUST00000087050 U2af1Q9D883 239 aaKnown RBP12.24□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Kif7B7ZNG0 1348 aa12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Nap1l3Q794H2 544 aa12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Anp32eP97822 260 aaKnown RBP12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Znhit6Q3UFB2 460 aaKnown RBP12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Kif3aP28741 701 aa12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Map4P27546 1125 aaKnown RBP12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Podxl2Q8CAE9 603 aa12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Gpatch11Q3UFS4 262 aa12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Chaf1aQ9QWF0 911 aa12.23□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Hook1Q8BIL5 728 aa12.22□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Cttnbp2B9EJA2 1648 aa12.22□□□□□ -0.45
Col4a4-201ENSMUST00000087050 KinQ8K339 391 aa12.22□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Casq1O09165 405 aa12.22□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Rock1P70335 1354 aa12.22□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Evc2Q8K1G2 1220 aa12.22□□□□□ -0.45
Col4a4-201ENSMUST00000087050 BccipQ9CWI3 316 aa12.21□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Kif4P33174 1231 aa12.21□□□□□ -0.45
Col4a4-201ENSMUST00000087050 Dhx8A2A4P0 1244 aaKnown RBP12.21□□□□□ -0.46
Col4a4-201ENSMUST00000087050 U2surpQ6NV83 1029 aaKnown RBP12.21□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Gripap1Q8VD04 806 aa12.2□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Q3TQI7 289 aaKnown RBP12.2□□□□□ -0.46
Col4a4-201ENSMUST00000087050 GorabQ8BRM2 368 aa12.2□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Rab11fip3Q8CHD8 1047 aa12.19□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Cnga1P29974 684 aa12.19□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Tmco5bQ80X59 307 aa12.19□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Chmp4cQ9D7F7 232 aa12.19□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Gcom1E9PZ54 550 aa12.18□□□□□ -0.46
Col4a4-201ENSMUST00000087050 MyzapQ3UIJ9 466 aa12.18□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Ifit1bl1D3Z6F0 470 aa12.18□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Kif3cO35066 796 aa12.18□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Mphosph9A6H5Y1 991 aa12.18□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Hap1O35668 628 aa12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Nolc1E9Q5C9 702 aaKnown RBP12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Rsph4aQ8BYM7 716 aa12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Rabep1O35551 862 aa12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Nup155Q99P88 1391 aaKnown RBP12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Dctn1O08788 1281 aa12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 NaspQ99MD9 773 aaKnown RBP12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Crybg2B7ZCC2 1516 aa12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 CenpjQ569L8 1344 aa12.17□□□□□ -0.46
Col4a4-201ENSMUST00000087050 ChgaP26339 463 aaKnown RBP12.16□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Isy1Q69ZQ2 285 aaKnown RBP12.16□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Rufy1Q8BIJ7 712 aa12.16□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Sh3bgrQ9WUZ7 214 aa12.16□□□□□ -0.46
Col4a4-201ENSMUST00000087050 NgefQ8CHT1 710 aa12.15□□□□□ -0.46
Col4a4-201ENSMUST00000087050 CrebrfQ8CDG5 640 aaKnown RBP12.15□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Plcd4Q8K3R3 807 aa12.15□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Brpf1B2RRD7 1212 aa12.15□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Ciz1Q8VEH2 845 aa12.15□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Ksr2Q3UVC0 959 aa12.15□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Ppm1eQ80TL0 749 aa12.15□□□□□ -0.46
Col4a4-201ENSMUST00000087050 Gm21969J3QJZ1 289 aa12.15□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Cluap1Q8R3P7 413 aa12.15□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Ddx11Q6AXC6 880 aa12.14□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Gabpb2P81069 414 aa12.14□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Pds5bQ4VA53 1446 aaKnown RBP12.14□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Ipo4Q8VI75 1082 aa12.14□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Noc3lQ8VI84 807 aaKnown RBP12.14□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Utp3Q9JI13 469 aaKnown RBP12.13□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Cux2P70298 1426 aa12.13□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Fam43aQ8BUP8 424 aa12.13□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Atl3Q91YH5 541 aa12.13□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Ccdc88bQ4QRL3 1481 aa12.12□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Gpatch3Q8BIY1 525 aa12.12□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Cplx2P84086 134 aa12.12□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Rnf20Q5DTM8 973 aa12.11□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Srcin1Q9QWI6 1250 aa12.11□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Smarca2Q6DIC0 1577 aa12.11□□□□□ -0.47
Col4a4-201ENSMUST00000087050 PhaxQ9JJT9 385 aaKnown RBP12.11□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Usp47Q8BY87 1376 aa12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 CrbnQ8C7D2 445 aa12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Dcaf11Q91VU6 549 aa12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 HdgfP51859 237 aaKnown RBP12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Trak1Q6PD31 939 aa12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Mrvi1Q9WUX5 899 aaKnown RBP12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Ccnb3Q810T2 1396 aa12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Ubxn4Q8VCH8 506 aa12.1□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Cchcr1Q8K2I2 770 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Plekhh1Q80TI1 1356 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Pnmal2G3X9N3 661 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Cdkn1cP49919 348 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Odf2A3KGV1 830 aaKnown RBP12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Gtf2a1Q99PM3 378 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Rpap1Q80TE0 1409 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Mns1Q61884 491 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Cetn4Q8K4K1 168 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Rec8Q8C5S7 591 aa12.09□□□□□ -0.47
Col4a4-201ENSMUST00000087050 Trim58Q5NCC9 485 aa12.08□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Carmil1Q6EDY6 1374 aa12.08□□□□□ -0.48
Col4a4-201ENSMUST00000087050 IbspQ61711 324 aa12.08□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Znf771Q8BJ90 317 aa12.08□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Aebp1Q640N1 1128 aa12.08□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Kri1Q8VDQ9 704 aaKnown RBP12.08□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Rapgef2Q8CHG7 1496 aa12.07□□□□□ -0.48
Col4a4-201ENSMUST00000087050 PdcQ9QW08 244 aa12.07□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Chmp3Q9CQ10 224 aa12.07□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Ncoa2Q61026 1462 aa12.07□□□□□ -0.48
Col4a4-201ENSMUST00000087050 Prkrip1Q9CWV6 186 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms