RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Afap1Q80YS6 731 aa18.87■□□□□ 0.61
Ccdc28a-202ENSMUST00000080860 Adgrb2Q8CGM1 1561 aa18.85■□□□□ 0.61
Ccdc28a-202ENSMUST00000080860 Rsph4aQ8BYM7 716 aa18.85■□□□□ 0.61
Ccdc28a-202ENSMUST00000080860 CltcQ68FD5 1675 aaKnown RBP18.85■□□□□ 0.61
Ccdc28a-202ENSMUST00000080860 Safb2Q80YR5 991 aaKnown RBP18.84■□□□□ 0.61
Ccdc28a-202ENSMUST00000080860 Vps8Q0P5W1 1427 aa18.83■□□□□ 0.61
Ccdc28a-202ENSMUST00000080860 Usp54Q8BL06 1588 aaKnown RBP18.83■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Ssh2Q5SW75 1423 aa18.83■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Topaz1E5FYH1 1653 aa18.82■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Rrp7aQ9D1C9 280 aaKnown RBP18.82■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Cabp1Q9JLK7 227 aa18.82■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Dip2aQ8BWT5 1523 aa18.81■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 ShprhQ7TPQ3 1674 aa18.8■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Adamts7Q68SA9 1657 aa18.79■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Rfx7F8VPJ6 1459 aa18.78■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Spag9Q58A65 1321 aaKnown RBP18.78■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 MyclP10166 368 aa18.77■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Kif3bQ61771 747 aa18.77■□□□□ 0.6
Ccdc28a-202ENSMUST00000080860 Myo5cE9Q1F5 1742 aa18.77■□□□□ 0.59
Ccdc28a-202ENSMUST00000080860 UacaQ8CGB3 1411 aa18.75■□□□□ 0.59
Ccdc28a-202ENSMUST00000080860 Robo2Q7TPD3 1470 aa18.75■□□□□ 0.59
Ccdc28a-202ENSMUST00000080860 Tmem131lQ3U3D7 1597 aa18.73■□□□□ 0.59
Ccdc28a-202ENSMUST00000080860 Prex1Q69ZK0 1650 aa18.73■□□□□ 0.59
Ccdc28a-202ENSMUST00000080860 Scn4aQ9ER60 1841 aa18.71■□□□□ 0.59
Ccdc28a-202ENSMUST00000080860 Hfm1D3Z4R1 1434 aa18.7■□□□□ 0.58
Ccdc28a-202ENSMUST00000080860 Abcc6Q9R1S7 1498 aa18.7■□□□□ 0.58
Ccdc28a-202ENSMUST00000080860 Kif1bQ60575 1816 aaKnown RBP18.7■□□□□ 0.58
Ccdc28a-202ENSMUST00000080860 Kdm5aQ3UXZ9 1690 aa18.68■□□□□ 0.58
Ccdc28a-202ENSMUST00000080860 Ltbp4Q8K4G1 1666 aa18.66■□□□□ 0.58
Ccdc28a-202ENSMUST00000080860 AlkP97793 1621 aa18.65■□□□□ 0.58
Ccdc28a-202ENSMUST00000080860 Rimbp3Q3V0F0 1606 aa18.64■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Ncoa1P70365 1447 aa18.64■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Phlpp1Q8CHE4 1687 aa18.63■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Chd2E9PZM4 1827 aaKnown RBP18.63■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 AnkarA2RT91 1465 aa18.63■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Chic2Q9D9G3 165 aa18.62■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Pde4cQ3UEI1 686 aa18.6■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Akap12Q9WTQ5 1684 aa18.59■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Asxl1P59598 1514 aa18.59■□□□□ 0.57
Ccdc28a-202ENSMUST00000080860 Adgrb3Q80ZF8 1522 aa18.58■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Tecpr2Q3UH45 1423 aa18.57■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Ylpm1Q9R0I7 1386 aaKnown RBP18.56■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Ino80Q6ZPV2 1559 aa18.55■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 GphnQ8BUV3 769 aaKnown RBP18.55■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Mia2Q91ZV0 1396 aa18.53■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Itsn1Q9Z0R4 1714 aa18.52■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Tarbp1E9Q368 1579 aa18.52■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Fhad1A6PWD2 1420 aa18.52■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Lmtk3Q5XJV6 1424 aa18.52■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 NclP09405 707 aaKnown RBP18.52■□□□□ 0.56
Ccdc28a-202ENSMUST00000080860 Lamc1P02468 1607 aaKnown RBP18.52■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Scaf11E9PZM7 1456 aaKnown RBP18.5■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Ttc21bQ0HA38 1315 aa18.49■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Rims2Q9EQZ7 1530 aa18.49■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Clstn2Q9ER65 966 aa18.49■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Skint5A7XUY5 1461 aa18.49■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Uggt1Q6P5E4 1551 aa18.49■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Myom3A2ABU4 1439 aa18.49■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 PtprgQ05909 1442 aa18.49■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Nup155Q99P88 1391 aaKnown RBP18.48■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 PzpQ61838 1495 aa18.47■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Nsd2Q8BVE8 1365 aa18.46■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Prdm2A2A7B5 1709 aaKnown RBP18.46■□□□□ 0.55
Ccdc28a-202ENSMUST00000080860 Kif13aQ9EQW7 1749 aa18.44■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Map4P27546 1125 aaKnown RBP18.44■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Zfp644E9QA22 1323 aa18.44■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Gemin5Q8BX17 1502 aaKnown RBP18.44■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Iqgap3F8VQ29 1632 aa18.42■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Fbxo41Q6NS60 873 aa18.42■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Fam50aQ9WV03 339 aaKnown RBP18.42■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Gli3Q61602 1583 aa18.42■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Efcab6Q6P1E8 1516 aa18.4■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 UbtfP25976 765 aaKnown RBP18.4■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Ttll5Q8CHB8 1328 aa18.4■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 DroshaQ5HZJ0 1373 aaKnown RBP18.4■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Naip7Q9JIB3 1402 aa18.4■□□□□ 0.54
Ccdc28a-202ENSMUST00000080860 Nrxn3Q6P9K9 1571 aa18.39■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Med1Q925J9 1575 aa18.39■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Cd109Q8R422 1442 aa18.39■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Iqsec2Q5DU25 1478 aa18.39■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Gm13697A2AK42 830 aa18.38■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Eif2ak4Q9QZ05 1648 aa18.38■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Zbtb7cQ8VCZ7 619 aa18.37■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Iqgap1Q9JKF1 1657 aaKnown RBP18.37■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Tubgcp6G5E8P0 1769 aa18.36■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Hnrnpul2Q00PI9 745 aaKnown RBP18.36■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Abca8aQ8K442 1620 aa18.35■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Atp7aQ64430 1491 aa18.35■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Kif21bQ9QXL1 1668 aa18.34■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Edc4Q3UJB9 1406 aaKnown RBP18.33■□□□□ 0.53
Ccdc28a-202ENSMUST00000080860 Rapgef3Q8VCC8 918 aa18.33■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 Mroh1E0CZ22 1640 aa18.33■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 Zc3h13E9Q784 1729 aaKnown RBP18.32■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 Pip4k2bQ80XI4 416 aa18.31■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 PplQ9R269 1755 aa18.3■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 Pik3c2gO70167 1506 aa18.3■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 Setd1aE9PYH6 1716 aa18.29■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 PalldQ9ET54 1408 aa18.27■□□□□ 0.52
Ccdc28a-202ENSMUST00000080860 Thsd7aQ69ZU6 1645 aa18.27■□□□□ 0.51
Ccdc28a-202ENSMUST00000080860 Myo3aQ8K3H5 1613 aa18.27■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms