RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Ccar1Q8CH18 1146 aaKnown RBP10.8□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Chrna2Q91X60 512 aa10.8□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Chmp5Q9D7S9 219 aa10.8□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Sox12Q04890 314 aa10.79□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Ppp1r18Q8BQ30 594 aa10.79□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Znf771Q8BJ90 317 aa10.79□□□□□ -0.68
Polr1a-201ENSMUST00000055296 March6Q6ZQ89 909 aa10.79□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Cwc22Q8C5N3 908 aaKnown RBP10.78□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Ush1cQ9ES64 910 aa10.78□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Gcom1E9PZ54 550 aa10.78□□□□□ -0.68
Polr1a-201ENSMUST00000055296 MyzapQ3UIJ9 466 aa10.78□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Pnmal2G3X9N3 661 aa10.78□□□□□ -0.68
Polr1a-201ENSMUST00000055296 EspnQ9ET47 871 aa10.78□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Dhx16G3X8X0 1044 aaKnown RBP10.77□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Atp6v1dP57746 247 aa10.77□□□□□ -0.69
Polr1a-201ENSMUST00000055296 HdgfP51859 237 aaKnown RBP10.76□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Utp3Q9JI13 469 aaKnown RBP10.76□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Pibf1E9Q6K3 756 aa10.76□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Ddx11Q6AXC6 880 aa10.76□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Ccp110Q7TSH4 1004 aa10.76□□□□□ -0.69
Polr1a-201ENSMUST00000055296 A0A1L1SQF0 893 aa10.75□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Rrp7aQ9D1C9 280 aaKnown RBP10.75□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Cnksr2Q80YA9 1032 aa10.75□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Speer4f1Q9D5Q6 258 aa10.75□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Anp32eP97822 260 aaKnown RBP10.75□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Supt16hQ920B9 1047 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Slc4a10Q5DTL9 1118 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Nap1l3Q794H2 544 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Commd10Q8JZY2 202 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Stk26Q99JT2 416 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Fhad1A6PWD2 1420 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Ipo8Q7TMY7 1010 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Sh3bgrQ9WUZ7 214 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Birc3O08863 600 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Rec8Q8C5S7 591 aa10.74□□□□□ -0.69
Polr1a-201ENSMUST00000055296 AppP12023 770 aa10.73□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Polr3gQ6NXY9 223 aa10.73□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Pdcl3Q8BVF2 240 aa10.73□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Hook1Q8BIL5 728 aa10.73□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Ppp4r3bQ922R5 820 aa10.72□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Srek1Q8BZX4 494 aaKnown RBP10.72□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Znf526Q8BI66 675 aa10.72□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Tcerg1Q8CGF7 1100 aaKnown RBP10.72□□□□□ -0.69
Polr1a-201ENSMUST00000055296 U2af1Q9D883 239 aaKnown RBP10.71□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Pak3Q61036 559 aa10.71□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Evc2Q8K1G2 1220 aa10.71□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Golga3P55937 1487 aa10.71□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Plagl1Q9JLQ4 704 aa10.71□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Cwc15Q9JHS9 229 aaKnown RBP10.71□□□□□ -0.69
Polr1a-201ENSMUST00000055296 Dixdc1Q80Y83 711 aa10.71□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Cplx1P63040 134 aa10.7□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Ralbp1Q62172 648 aa10.7□□□□□ -0.7
Polr1a-201ENSMUST00000055296 St18Q80TY4 1045 aa10.7□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Ccar2Q8VDP4 922 aaKnown RBP10.7□□□□□ -0.7
Polr1a-201ENSMUST00000055296 SafbD3YXK2 937 aaKnown RBP10.7□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Cep89Q9CZX2 791 aa10.7□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Necab1Q8BG18 352 aa10.7□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Setd5Q5XJV7 1441 aa10.69□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Filip1lQ6P6L0 1131 aa10.69□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Mtus2Q3UHD3 1353 aa10.69□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Sycp2Q9CUU3 1500 aa10.69□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Ipo9Q91YE6 1041 aa10.69□□□□□ -0.7
Polr1a-201ENSMUST00000055296 AknaQ80VW7 1404 aa10.69□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Kcnj4P52189 445 aa10.69□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Rsph3aQ3UFY4 516 aa10.68□□□□□ -0.7
Polr1a-201ENSMUST00000055296 FosbP13346 338 aa10.68□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Erich4Q3UNU4 136 aa10.68□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Spata24Q6P926 205 aa10.68□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Bicd2Q921C5 820 aa10.67□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Cttnbp2B9EJA2 1648 aa10.67□□□□□ -0.7
Polr1a-201ENSMUST00000055296 MlecQ6ZQI3 291 aaKnown RBP10.67□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Kif3cO35066 796 aa10.67□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Arhgef18Q6P9R4 1021 aa10.67□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Cplx2P84086 134 aa10.67□□□□□ -0.7
Polr1a-201ENSMUST00000055296 L1td1Q587J6 782 aaKnown RBP10.67□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Ccdc146E9Q9F7 977 aa10.66□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Gbp4Q61107 620 aa10.66□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Psme1P97371 249 aa10.66□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Themis2Q91YX0 663 aa10.66□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Sept11Q8C1B7 431 aaKnown RBP10.66□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Smarca4Q3TKT4 1613 aaKnown RBP10.65□□□□□ -0.7
Polr1a-201ENSMUST00000055296 Hnrnpul1Q8VDM6 859 aaKnown RBP10.65□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Tmf1B9EKI3 1091 aa10.64□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Pknox2Q8BG99 474 aa10.64□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Rsph4aQ8BYM7 716 aa10.64□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Golga2Q921M4 999 aa10.64□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Gpatch3Q8BIY1 525 aa10.63□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Eif2s2Q99L45 331 aaKnown RBP10.63□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Gtf2f1Q3THK3 508 aaKnown RBP10.63□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Aebp2Q9Z248 504 aaKnown RBP10.63□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Ylpm1Q9R0I7 1386 aaKnown RBP10.62□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Def6Q8C2K1 630 aa10.62□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Erlin2Q8BFZ9 340 aa10.62□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Smarca2Q6DIC0 1577 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Mns1Q61884 491 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Gps2Q921N8 327 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Gtf3c3Q3TMP1 882 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Smc2Q8CG48 1191 aaKnown RBP10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Ksr2Q3UVC0 959 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 NaspQ99MD9 773 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms