RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Dhx9O70133 1380 aaKnown RBP32.94■■■□□ 2.86
Upf3a-201ENSMUST00000043767 Hnrnpul2Q00PI9 745 aaKnown RBP32.92■■■□□ 2.86
Upf3a-201ENSMUST00000043767 Kif3bQ61771 747 aa32.92■■■□□ 2.86
Upf3a-201ENSMUST00000043767 Dip2cE9PWR4 1557 aa32.91■■■□□ 2.86
Upf3a-201ENSMUST00000043767 Pde4cQ3UEI1 686 aa32.91■■■□□ 2.86
Upf3a-201ENSMUST00000043767 Znf518aB2RRF6 1478 aaKnown RBP32.9■■■□□ 2.86
Upf3a-201ENSMUST00000043767 ShprhQ7TPQ3 1674 aa32.89■■■□□ 2.86
Upf3a-201ENSMUST00000043767 PtprgQ05909 1442 aa32.89■■■□□ 2.86
Upf3a-201ENSMUST00000043767 AdgbG3UZ78 1657 aa32.89■■■□□ 2.86
Upf3a-201ENSMUST00000043767 Fndc1E9Q043 1732 aa32.88■■■□□ 2.85
Upf3a-201ENSMUST00000043767 RereQ80TZ9 1558 aa32.87■■■□□ 2.85
Upf3a-201ENSMUST00000043767 Usp47Q8BY87 1376 aa32.85■■■□□ 2.85
Upf3a-201ENSMUST00000043767 Yeats2Q3TUF7 1407 aa32.84■■■□□ 2.85
Upf3a-201ENSMUST00000043767 Rprd2Q6NXI6 1469 aaKnown RBP32.83■■■□□ 2.85
Upf3a-201ENSMUST00000043767 Cd109Q8R422 1442 aa32.82■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Synj2Q9D2G5 1434 aa32.82■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Robo2Q7TPD3 1470 aa32.81■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Kif1bQ60575 1816 aaKnown RBP32.81■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Pik3c2gO70167 1506 aa32.8■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Hecw2Q6I6G8 1578 aa32.79■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Naip5Q9R016 1403 aa32.79■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Ppargc1bQ8VHJ7 1014 aa32.78■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Cdc42bpgQ80UW5 1551 aa32.77■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Gli2Q0VGT2 1544 aa32.77■■■□□ 2.84
Upf3a-201ENSMUST00000043767 Cul9Q80TT8 1865 aa32.75■■■□□ 2.83
Upf3a-201ENSMUST00000043767 Aebp2Q9Z248 504 aaKnown RBP32.75■■■□□ 2.83
Upf3a-201ENSMUST00000043767 Naip6Q9JIB6 1403 aa32.75■■■□□ 2.83
Upf3a-201ENSMUST00000043767 Myo5cE9Q1F5 1742 aa32.74■■■□□ 2.83
Upf3a-201ENSMUST00000043767 Topbp1Q6ZQF0 1515 aa32.73■■■□□ 2.83
Upf3a-201ENSMUST00000043767 Atp7aQ64430 1491 aa32.72■■■□□ 2.83
Upf3a-201ENSMUST00000043767 Myom3A2ABU4 1439 aa32.7■■■□□ 2.83
Upf3a-201ENSMUST00000043767 Plch2A2AP18 1501 aa32.69■■■□□ 2.82
Upf3a-201ENSMUST00000043767 Kif14L0N7N1 1674 aaKnown RBP32.68■■■□□ 2.82
Upf3a-201ENSMUST00000043767 Abca6Q8K441 1624 aa32.63■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Dnajc5gQ8C632 165 aa32.63■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Dot1lQ6XZL8 1540 aa32.63■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Pcdh10E9PXQ7 1057 aa32.62■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Nsd2Q8BVE8 1365 aa32.62■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Anks4bQ8K3X6 423 aa32.62■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Rgl3Q3UYI5 709 aa32.6■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Uggt2E9Q4X2 1504 aa32.6■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Ylpm1Q9R0I7 1386 aaKnown RBP32.59■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Wdr66E9Q743 1299 aa32.58■■■□□ 2.81
Upf3a-201ENSMUST00000043767 Cfap65Q3V0B4 1847 aa32.57■■■□□ 2.8
Upf3a-201ENSMUST00000043767 DroshaQ5HZJ0 1373 aaKnown RBP32.57■■■□□ 2.8
Upf3a-201ENSMUST00000043767 Tarbp1E9Q368 1579 aa32.57■■■□□ 2.8
Upf3a-201ENSMUST00000043767 Prex1Q69ZK0 1650 aa32.56■■■□□ 2.8
Upf3a-201ENSMUST00000043767 Trpm1Q2TV84 1622 aa32.56■■■□□ 2.8
Upf3a-201ENSMUST00000043767 Ttc21bQ0HA38 1315 aa32.54■■■□□ 2.8
Upf3a-201ENSMUST00000043767 Tmem131lQ3U3D7 1597 aa32.54■■■□□ 2.8
Upf3a-201ENSMUST00000043767 AnkarA2RT91 1465 aa32.53■■■□□ 2.8
Upf3a-201ENSMUST00000043767 Edc4Q3UJB9 1406 aaKnown RBP32.52■■■□□ 2.8
Upf3a-201ENSMUST00000043767 Qser1A2BIE1 1698 aa32.52■■■□□ 2.8
Upf3a-201ENSMUST00000043767 ClspnQ80YR7 1315 aa32.5■■■□□ 2.79
Upf3a-201ENSMUST00000043767 Erich6D3Z6S9 713 aa32.49■■■□□ 2.79
Upf3a-201ENSMUST00000043767 NpatQ8BMA5 1420 aa32.49■■■□□ 2.79
Upf3a-201ENSMUST00000043767 Plppr3Q7TPB0 716 aa32.47■■■□□ 2.79
Upf3a-201ENSMUST00000043767 Zmym4A2A791 1549 aaKnown RBP32.47■■■□□ 2.79
Upf3a-201ENSMUST00000043767 Washc2Q6PGL7 1334 aa32.47■■■□□ 2.79
Upf3a-201ENSMUST00000043767 Rock1P70335 1354 aa32.46■■■□□ 2.79
Upf3a-201ENSMUST00000043767 Camsap2Q8C1B1 1461 aa32.45■■■□□ 2.79
Upf3a-201ENSMUST00000043767 Ppip5k1A2ARP1 1436 aa32.41■■■□□ 2.78
Upf3a-201ENSMUST00000043767 Afap1Q80YS6 731 aa32.39■■■□□ 2.78
Upf3a-201ENSMUST00000043767 Sall3Q62255 1320 aa32.37■■■□□ 2.77
Upf3a-201ENSMUST00000043767 Grwd1Q810D6 446 aaKnown RBP32.36■■■□□ 2.77
Upf3a-201ENSMUST00000043767 Iqgap3F8VQ29 1632 aa32.35■■■□□ 2.77
Upf3a-201ENSMUST00000043767 Mbd5B1AYB6 1498 aa32.33■■■□□ 2.77
Upf3a-201ENSMUST00000043767 Stk24Q99KH8 431 aa32.3■■■□□ 2.76
Upf3a-201ENSMUST00000043767 Hdac5Q9Z2V6 1113 aa32.29■■■□□ 2.76
Upf3a-201ENSMUST00000043767 Mug2P28666 1451 aa32.28■■■□□ 2.76
Upf3a-201ENSMUST00000043767 Mroh3A0A1D5RM54 893 aa32.28■■■□□ 2.76
Upf3a-201ENSMUST00000043767 ErbinQ80TH2 1402 aa32.26■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Adamts7Q68SA9 1657 aa32.24■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Adamts13Q769J6 1426 aa32.24■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Talpid3E9PV87 1520 aa32.24■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Iqgap1Q9JKF1 1657 aaKnown RBP32.24■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Cdk13Q69ZA1 1511 aaKnown RBP32.24■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Gm13697A2AK42 830 aa32.23■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Abcc6Q9R1S7 1498 aa32.22■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Sin3aQ60520 1274 aaKnown RBP32.22■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Akap12Q9WTQ5 1684 aa32.21■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Adamtsl3G3UXC7 1706 aa32.21■■■□□ 2.75
Upf3a-201ENSMUST00000043767 Abca8aQ8K442 1620 aa32.21■■■□□ 2.75
Upf3a-201ENSMUST00000043767 CltcQ68FD5 1675 aaKnown RBP32.2■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Ino80Q6ZPV2 1559 aa32.2■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Ifit1bl1D3Z6F0 470 aa32.2■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Dapk1Q80YE7 1442 aa32.2■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Polr3aB2RXC6 1390 aa32.19■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Knl1Q66JQ7 1612 aa32.19■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Tecpr2Q3UH45 1423 aa32.18■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Cpsf1Q9EPU4 1441 aaKnown RBP32.18■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Tulp4Q9JIL5 1547 aa32.18■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Adgrb3Q80ZF8 1522 aa32.16■■■□□ 2.74
Upf3a-201ENSMUST00000043767 AatkQ80YE4 1365 aa32.16■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Hfm1D3Z4R1 1434 aa32.16■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Nop58Q6DFW4 536 aaKnown RBP32.15■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Prdm2A2A7B5 1709 aaKnown RBP32.15■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Rsph4aQ8BYM7 716 aa32.15■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Myom2Q14BI5 1463 aa32.14■■■□□ 2.74
Upf3a-201ENSMUST00000043767 Rundc1Q0VDN7 615 aa32.14■■■□□ 2.74
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms