RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Nup155Q99P88 1391 aaKnown RBP12.97□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Trpm1Q2TV84 1622 aa12.97□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 PtprtQ99M80 1454 aa12.97□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Kif1bQ60575 1816 aaKnown RBP12.97□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 AI481877A2ALV5 1481 aa12.97□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Cdk13Q69ZA1 1511 aaKnown RBP12.97□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Kiaa0556Q8C753 1610 aa12.97□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Topbp1Q6ZQF0 1515 aa12.96□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Nos1Q9Z0J4 1429 aa12.95□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Uggt2E9Q4X2 1504 aa12.95□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Polr3aB2RXC6 1390 aa12.94□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Kdm5cP41230 1554 aa12.94□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Myom3A2ABU4 1439 aa12.93□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Atp7aQ64430 1491 aa12.93□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Ythdc2B2RR83 1445 aaKnown RBP12.91□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Plekhg5Q66T02 1073 aa12.91□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Prdm16A2A935 1275 aa12.91□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Abca8aQ8K442 1620 aa12.9□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Sin3aQ60520 1274 aaKnown RBP12.9□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 AglF8VPN4 1532 aa12.9□□□□□ -0.34
Ctnna1-201ENSMUST00000042345 Edc4Q3UJB9 1406 aaKnown RBP12.89□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Dapk1Q80YE7 1442 aa12.89□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Znf710Q3U288 666 aa12.89□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 AnkarA2RT91 1465 aa12.88□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Iqgap3F8VQ29 1632 aa12.87□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Akap12Q9WTQ5 1684 aa12.87□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Plch2A2AP18 1501 aa12.87□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Tulp4Q9JIL5 1547 aa12.87□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Cd109Q8R422 1442 aa12.87□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Trak1Q6PD31 939 aa12.86□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Pola1P33609 1465 aa12.85□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Map4P27546 1125 aaKnown RBP12.85□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Sipa1l1Q8C0T5 1782 aa12.85□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Abca6Q8K441 1624 aa12.85□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Znf518aB2RRF6 1478 aaKnown RBP12.84□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Depdc5P61460 1591 aa12.84□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Atp10aO54827 1508 aa12.84□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Cdc42bpgQ80UW5 1551 aa12.84□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Prex1Q69ZK0 1650 aa12.84□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Sart1Q9Z315 806 aaKnown RBP12.84□□□□□ -0.35
Ctnna1-201ENSMUST00000042345 Washc2Q6PGL7 1334 aa12.83□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Ehbp1l1Q99MS7 1716 aa12.83□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Cep152A2AUM9 1736 aaKnown RBP12.82□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 AdgbG3UZ78 1657 aa12.82□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Cul9Q80TT8 1865 aa12.82□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Tecpr2Q3UH45 1423 aa12.81□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Ino80Q6ZPV2 1559 aa12.81□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Rock2P70336 1388 aa12.8□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Cwc22Q8C5N3 908 aaKnown RBP12.8□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Clasp1Q80TV8 1535 aaKnown RBP12.8□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Zmym4A2A791 1549 aaKnown RBP12.8□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Cdk5rap2Q8K389 1822 aa12.79□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Gm13695A2AK44 830 aa12.79□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Clstn2Q9ER65 966 aa12.79□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Itsn2Q9Z0R6 1659 aa12.79□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Ylpm1Q9R0I7 1386 aaKnown RBP12.78□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 DnmbpQ6TXD4 1580 aa12.78□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Ube2uB1AUC4 352 aa12.78□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Adgrb3Q80ZF8 1522 aa12.78□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Spag9Q58A65 1321 aaKnown RBP12.78□□□□□ -0.36
Ctnna1-201ENSMUST00000042345 Ak9G3UYQ4 1894 aa12.77□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Ift172Q6VH22 1749 aa12.77□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 RereQ80TZ9 1558 aa12.76□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Rims1Q99NE5 1463 aa12.76□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Abcc6Q9R1S7 1498 aa12.76□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Nsd2Q8BVE8 1365 aa12.76□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Csrnp3P59055 597 aa12.76□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Rrp7aQ9D1C9 280 aaKnown RBP12.75□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Fkbp15Q6P9Q6 1216 aaKnown RBP12.75□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Col17a1Q07563 1470 aa12.75□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Efcab6Q6P1E8 1516 aa12.75□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Adamts7Q68SA9 1657 aa12.74□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Pde4cQ3UEI1 686 aa12.74□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Mapk8ip2Q9ERE9 830 aa12.73□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 PnisrA2AJT4 805 aaKnown RBP12.73□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Rundc1Q0VDN7 615 aa12.73□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Myom1Q62234 1667 aaKnown RBP12.73□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Map3k5O35099 1380 aa12.73□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Myom2Q14BI5 1463 aa12.72□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Dip2cE9PWR4 1557 aa12.72□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Aplp2Q06335 707 aa12.72□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Uggt1Q6P5E4 1551 aa12.71□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Sbno1Q689Z5 1390 aa12.71□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Rgl3Q3UYI5 709 aa12.71□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Plxnc1Q9QZC2 1574 aa12.71□□□□□ -0.37
Ctnna1-201ENSMUST00000042345 Slc4a2P13808 1237 aaKnown RBP12.69□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Stra8P70278 393 aa12.69□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 1700123L14RikQ3V2K7 440 aa12.69□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Tnnt3Q9QZ47 272 aa12.68□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 OvosQ3UU35 1456 aa12.68□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Card11Q8CIS0 1159 aa12.67□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Ttc37F8VPK0 1563 aa12.67□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Cfap65Q3V0B4 1847 aa12.66□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Gli2Q0VGT2 1544 aa12.66□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Hnrnpul2Q00PI9 745 aaKnown RBP12.66□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Myo3aQ8K3H5 1613 aa12.65□□□□□ -0.38
Ctnna1-201ENSMUST00000042345 Mroh1E0CZ22 1640 aa12.64□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Talpid3E9PV87 1520 aa12.63□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Hecw2Q6I6G8 1578 aa12.62□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Ttc21bQ0HA38 1315 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms