RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Crybg2B7ZCC2 1516 aa16.78■□□□□ 0.28
Notch1-201ENSMUST00000028288 Pibf1E9Q6K3 756 aa16.77■□□□□ 0.27
Notch1-201ENSMUST00000028288 Sox12Q04890 314 aa16.77■□□□□ 0.27
Notch1-201ENSMUST00000028288 4933402E13RikQ9D4D2 429 aa16.77■□□□□ 0.27
Notch1-201ENSMUST00000028288 Ppp1r18Q8BQ30 594 aa16.76■□□□□ 0.27
Notch1-201ENSMUST00000028288 Slc4a1apE9PX68 744 aa16.76■□□□□ 0.27
Notch1-201ENSMUST00000028288 Rock1P70335 1354 aa16.76■□□□□ 0.27
Notch1-201ENSMUST00000028288 Becn1O88597 448 aa16.76■□□□□ 0.27
Notch1-201ENSMUST00000028288 Trim30aP15533 496 aa16.76■□□□□ 0.27
Notch1-201ENSMUST00000028288 CrebrfQ8CDG5 640 aaKnown RBP16.76■□□□□ 0.27
Notch1-201ENSMUST00000028288 Atp6v1dP57746 247 aa16.75■□□□□ 0.27
Notch1-201ENSMUST00000028288 Psme1P97371 249 aa16.75■□□□□ 0.27
Notch1-201ENSMUST00000028288 Ddrgk1Q80WW9 315 aa16.74■□□□□ 0.27
Notch1-201ENSMUST00000028288 SetQ9EQU5 289 aaKnown RBP16.73■□□□□ 0.27
Notch1-201ENSMUST00000028288 Carmil1Q6EDY6 1374 aa16.73■□□□□ 0.27
Notch1-201ENSMUST00000028288 VgfQ0VGU4 617 aa16.72■□□□□ 0.27
Notch1-201ENSMUST00000028288 Cecr2E9Q2Z1 1453 aa16.72■□□□□ 0.27
Notch1-201ENSMUST00000028288 Tpd52l1O54818 204 aa16.72■□□□□ 0.27
Notch1-201ENSMUST00000028288 Cux2P70298 1426 aa16.72■□□□□ 0.27
Notch1-201ENSMUST00000028288 Mre11Q61216 706 aa16.71■□□□□ 0.27
Notch1-201ENSMUST00000028288 Lemd3Q9WU40 921 aa16.71■□□□□ 0.27
Notch1-201ENSMUST00000028288 Pank3Q8R2W9 370 aa16.71■□□□□ 0.27
Notch1-201ENSMUST00000028288 Arid3cA6PWV5 409 aa16.71■□□□□ 0.26
Notch1-201ENSMUST00000028288 CenpjQ569L8 1344 aa16.7■□□□□ 0.26
Notch1-201ENSMUST00000028288 Chmp3Q9CQ10 224 aa16.7■□□□□ 0.26
Notch1-201ENSMUST00000028288 Ccer1Q9CQL2 403 aa16.7■□□□□ 0.26
Notch1-201ENSMUST00000028288 Ccdc146E9Q9F7 977 aa16.69■□□□□ 0.26
Notch1-201ENSMUST00000028288 Txndc2Q6P902 515 aa16.69■□□□□ 0.26
Notch1-201ENSMUST00000028288 Ush1cQ9ES64 910 aa16.68■□□□□ 0.26
Notch1-201ENSMUST00000028288 Cgnl1Q6AW69 1298 aa16.68■□□□□ 0.26
Notch1-201ENSMUST00000028288 Mical1Q8VDP3 1048 aa16.68■□□□□ 0.26
Notch1-201ENSMUST00000028288 Ankrd36D3Z4K0 1415 aa16.68■□□□□ 0.26
Notch1-201ENSMUST00000028288 Fan1Q69ZT1 1020 aa16.68■□□□□ 0.26
Notch1-201ENSMUST00000028288 Tsen2Q6P7W5 460 aa16.67■□□□□ 0.26
Notch1-201ENSMUST00000028288 Dapk1Q80YE7 1442 aa16.67■□□□□ 0.26
Notch1-201ENSMUST00000028288 St18Q80TY4 1045 aa16.67■□□□□ 0.26
Notch1-201ENSMUST00000028288 Cspp1B2RX88 1205 aa16.66■□□□□ 0.26
Notch1-201ENSMUST00000028288 Filip1lQ6P6L0 1131 aa16.66■□□□□ 0.26
Notch1-201ENSMUST00000028288 Dnai2A2AC93 623 aa16.66■□□□□ 0.26
Notch1-201ENSMUST00000028288 Stard8Q8K031 1019 aa16.65■□□□□ 0.26
Notch1-201ENSMUST00000028288 Iqgap2Q3UQ44 1575 aa16.65■□□□□ 0.26
Notch1-201ENSMUST00000028288 Kif3bQ61771 747 aa16.65■□□□□ 0.26
Notch1-201ENSMUST00000028288 Q8BT18 775 aa16.64■□□□□ 0.26
Notch1-201ENSMUST00000028288 Sf3a1Q8K4Z5 791 aaKnown RBP16.64■□□□□ 0.26
Notch1-201ENSMUST00000028288 Slc4a10Q5DTL9 1118 aa16.64■□□□□ 0.25
Notch1-201ENSMUST00000028288 Ccdc60Q8C4J0 545 aa16.64■□□□□ 0.25
Notch1-201ENSMUST00000028288 Inpp5dQ9ES52 1191 aa16.62■□□□□ 0.25
Notch1-201ENSMUST00000028288 Tpm3P21107 285 aaKnown RBP16.61■□□□□ 0.25
Notch1-201ENSMUST00000028288 Ncoa2Q61026 1462 aa16.61■□□□□ 0.25
Notch1-201ENSMUST00000028288 Ccdc47Q9D024 483 aaKnown RBP16.6■□□□□ 0.25
Notch1-201ENSMUST00000028288 Rfx1P48377 963 aa16.6■□□□□ 0.25
Notch1-201ENSMUST00000028288 Casq1O09165 405 aa16.59■□□□□ 0.25
Notch1-201ENSMUST00000028288 Top2aQ01320 1528 aaKnown RBP16.58■□□□□ 0.24
Notch1-201ENSMUST00000028288 Map7d2A2AG50 781 aa16.57■□□□□ 0.24
Notch1-201ENSMUST00000028288 Ak7Q9D2H2 614 aa16.57■□□□□ 0.24
Notch1-201ENSMUST00000028288 Glipr1l2Q9CQ35 332 aa16.57■□□□□ 0.24
Notch1-201ENSMUST00000028288 Eif2s2Q99L45 331 aaKnown RBP16.56■□□□□ 0.24
Notch1-201ENSMUST00000028288 Utp3Q9JI13 469 aaKnown RBP16.56■□□□□ 0.24
Notch1-201ENSMUST00000028288 Nap1l3Q794H2 544 aa16.56■□□□□ 0.24
Notch1-201ENSMUST00000028288 Stk31Q99MW1 1018 aa16.55■□□□□ 0.24
Notch1-201ENSMUST00000028288 GsdmaQ9EST1 446 aa16.54■□□□□ 0.24
Notch1-201ENSMUST00000028288 Ap3b2Q9JME5 1082 aa16.54■□□□□ 0.24
Notch1-201ENSMUST00000028288 Cc2d2bA0A286YDU8 1405 aa16.54■□□□□ 0.24
Notch1-201ENSMUST00000028288 Kif16bB1AVY7 1312 aa16.54■□□□□ 0.24
Notch1-201ENSMUST00000028288 Fbxo2Q80UW2 297 aa16.54■□□□□ 0.24
Notch1-201ENSMUST00000028288 Ggt6Q6PDE7 497 aa16.53■□□□□ 0.24
Notch1-201ENSMUST00000028288 Kif7B7ZNG0 1348 aa16.53■□□□□ 0.24
Notch1-201ENSMUST00000028288 Vps8Q0P5W1 1427 aa16.52■□□□□ 0.24
Notch1-201ENSMUST00000028288 Tpm4Q6IRU2 248 aa16.52■□□□□ 0.24
Notch1-201ENSMUST00000028288 G3bp1P97855 465 aaKnown RBP16.52■□□□□ 0.23
Notch1-201ENSMUST00000028288 Fam184bQ0KK56 942 aa16.52■□□□□ 0.23
Notch1-201ENSMUST00000028288 Isy1Q69ZQ2 285 aaKnown RBP16.52■□□□□ 0.23
Notch1-201ENSMUST00000028288 Sart1Q9Z315 806 aaKnown RBP16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 Cc2d1aQ8K1A6 943 aa16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 Utp14aQ640M1 767 aaKnown RBP16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 Tceal9Q9DD24 104 aa16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 Rabep1O35551 862 aa16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 AppP12023 770 aa16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 KinQ8K339 391 aa16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 Gripap1Q8VD04 806 aa16.51■□□□□ 0.23
Notch1-201ENSMUST00000028288 HdgfP51859 237 aaKnown RBP16.5■□□□□ 0.23
Notch1-201ENSMUST00000028288 Plekhh1Q80TI1 1356 aa16.5■□□□□ 0.23
Notch1-201ENSMUST00000028288 Sh3bgrQ9WUZ7 214 aa16.5■□□□□ 0.23
Notch1-201ENSMUST00000028288 Trim58Q5NCC9 485 aa16.49■□□□□ 0.23
Notch1-201ENSMUST00000028288 Ralbp1Q62172 648 aa16.49■□□□□ 0.23
Notch1-201ENSMUST00000028288 Kif4P33174 1231 aa16.49■□□□□ 0.23
Notch1-201ENSMUST00000028288 Tpm1P58771 284 aa16.49■□□□□ 0.23
Notch1-201ENSMUST00000028288 Esx1O88933 382 aa16.49■□□□□ 0.23
Notch1-201ENSMUST00000028288 Usp40Q8BWR4 1235 aa16.48■□□□□ 0.23
Notch1-201ENSMUST00000028288 Vps53Q8CCB4 832 aa16.48■□□□□ 0.23
Notch1-201ENSMUST00000028288 Zscan10Q3URR7 782 aa16.48■□□□□ 0.23
Notch1-201ENSMUST00000028288 Taf3Q5HZG4 932 aa16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 Tomm22Q9CPQ3 142 aa16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 Atad2bE9Q166 1460 aaKnown RBP16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 WrnO09053 1401 aa16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 Gm21969J3QJZ1 289 aa16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 Cabp4Q8VHC5 271 aa16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 Ftsj3Q9DBE9 838 aaKnown RBP16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 Triml2E9PW10 424 aa16.47■□□□□ 0.23
Notch1-201ENSMUST00000028288 Gabpb2P81069 414 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms