RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 UacaQ8CGB3 1411 aa18.85■□□□□ 0.61
Col2a1-201ENSMUST00000023123 AampJ3QN89 436 aa18.85■□□□□ 0.61
Col2a1-201ENSMUST00000023123 CrebrfQ8CDG5 640 aaKnown RBP18.85■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Rock1P70335 1354 aa18.84■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Plekhh2Q8C115 1491 aa18.84■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Pknox2Q8BG99 474 aa18.84■□□□□ 0.61
Col2a1-201ENSMUST00000023123 SetQ9EQU5 289 aaKnown RBP18.83■□□□□ 0.61
Col2a1-201ENSMUST00000023123 Eif4g2Q62448 906 aaKnown RBP18.83■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Usp47Q8BY87 1376 aa18.83■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Pank3Q8R2W9 370 aa18.83■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Rpap1Q80TE0 1409 aa18.82■□□□□ 0.6
Col2a1-201ENSMUST00000023123 St18Q80TY4 1045 aa18.82■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Sf3a1Q8K4Z5 791 aaKnown RBP18.81■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Ccdc146E9Q9F7 977 aa18.81■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Dhx57Q6P5D3 1388 aaKnown RBP18.8■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Casq1O09165 405 aa18.8■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Ak7Q9D2H2 614 aa18.8■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Rapgef2Q8CHG7 1496 aa18.8■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Brpf1B2RRD7 1212 aa18.79■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Ralbp1Q62172 648 aa18.79■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Fbxo2Q80UW2 297 aa18.78■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Eif2s2Q99L45 331 aaKnown RBP18.78■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Carmil1Q6EDY6 1374 aa18.78■□□□□ 0.6
Col2a1-201ENSMUST00000023123 PrkcshO08795 521 aa18.78■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Tsen2Q6P7W5 460 aa18.78■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Filip1lQ6P6L0 1131 aa18.77■□□□□ 0.6
Col2a1-201ENSMUST00000023123 Lemd3Q9WU40 921 aa18.77■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Kif16bB1AVY7 1312 aa18.76■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Ecm2Q5FW85 670 aa18.76■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Ccnb3Q810T2 1396 aa18.76■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Nol10Q5RJG1 687 aaKnown RBP18.76■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Tnnt1O88346 262 aa18.75■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Ccer1Q9CQL2 403 aa18.75■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Rabep1O35551 862 aa18.75■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Znf710Q3U288 666 aa18.74■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Ccdc60Q8C4J0 545 aa18.74■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Inpp5dQ9ES52 1191 aa18.74■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Pdcl3Q8BVF2 240 aa18.74■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Prkrip1Q9CWV6 186 aaKnown RBP18.74■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Trim58Q5NCC9 485 aa18.74■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Dnai2A2AC93 623 aa18.73■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Tpm3P21107 285 aaKnown RBP18.73■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Rfx1P48377 963 aa18.72■□□□□ 0.59
Col2a1-201ENSMUST00000023123 CenpjQ569L8 1344 aa18.71■□□□□ 0.59
Col2a1-201ENSMUST00000023123 Nap1l3Q794H2 544 aa18.71■□□□□ 0.59
Col2a1-201ENSMUST00000023123 G3bp1P97855 465 aaKnown RBP18.7■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Fam184bQ0KK56 942 aa18.7■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Sh3bgrQ9WUZ7 214 aa18.7■□□□□ 0.58
Col2a1-201ENSMUST00000023123 GsdmaQ9EST1 446 aa18.7■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Atl3Q91YH5 541 aa18.69■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Esx1O88933 382 aa18.69■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Fan1Q69ZT1 1020 aa18.69■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Senp3Q9EP97 568 aaKnown RBP18.68■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Pibf1E9Q6K3 756 aa18.68■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Kif3bQ61771 747 aa18.68■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Gripap1Q8VD04 806 aa18.67■□□□□ 0.58
Col2a1-201ENSMUST00000023123 AknaQ80VW7 1404 aa18.67■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Cttnbp2B9EJA2 1648 aa18.67■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Kif4P33174 1231 aa18.67■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Ankrd36D3Z4K0 1415 aa18.66■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Dapk1Q80YE7 1442 aa18.66■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Zscan10Q3URR7 782 aa18.66■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Utp3Q9JI13 469 aaKnown RBP18.66■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Taf3Q5HZG4 932 aa18.65■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Kif7B7ZNG0 1348 aa18.65■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Iqgap2Q3UQ44 1575 aa18.65■□□□□ 0.58
Col2a1-201ENSMUST00000023123 Stk31Q99MW1 1018 aa18.64■□□□□ 0.58
Col2a1-201ENSMUST00000023123 KinQ8K339 391 aa18.64■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Plcd4Q8K3R3 807 aa18.64■□□□□ 0.57
Col2a1-201ENSMUST00000023123 MyclP10166 368 aa18.63■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Ccdc183A2AJB1 534 aa18.62■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Arid3cA6PWV5 409 aa18.62■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Ttll13A4Q9F6 804 aa18.62■□□□□ 0.57
Col2a1-201ENSMUST00000023123 LrpprcQ6PB66 1392 aaKnown RBP18.62■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Tpd52l1O54818 204 aa18.62■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Slc4a10Q5DTL9 1118 aa18.61■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Chmp3Q9CQ10 224 aa18.61■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Sart1Q9Z315 806 aaKnown RBP18.61■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Ccdc173A0JLY1 547 aa18.61■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Psme1P97371 249 aa18.6■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Ccdc30Q8BVF4 654 aa18.6■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Rpgrip1lQ8CG73 1264 aa18.58■□□□□ 0.57
Col2a1-201ENSMUST00000023123 Tpm1P58771 284 aa18.58■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Ciz1Q8VEH2 845 aa18.58■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Ccdc47Q9D024 483 aaKnown RBP18.58■□□□□ 0.56
Col2a1-201ENSMUST00000023123 KarsQ99MN1 595 aaKnown RBP18.58■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Srek1Q8BZX4 494 aaKnown RBP18.57■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Cetn4Q8K4K1 168 aa18.57■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Tomm22Q9CPQ3 142 aa18.57■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Rrp9Q91WM3 475 aaKnown RBP18.56■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Gprasp1Q5U4C1 1347 aa18.56■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Tpm2P58774 284 aa18.56■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Ccdc34Q3UI66 367 aa18.56■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Utp14aQ640M1 767 aaKnown RBP18.56■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Usp40Q8BWR4 1235 aa18.56■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Dhx29Q6PGC1 1365 aaKnown RBP18.55■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Txndc2Q6P902 515 aa18.55■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Hmgn5Q9JL35 406 aa18.55■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Pak3Q61036 559 aa18.55■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Mical1Q8VDP3 1048 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms