RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 DroshaQ5HZJ0 1373 aaKnown RBP17.58■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Usp47Q8BY87 1376 aa17.58■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Robo2Q7TPD3 1470 aa17.57■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Trak1Q6PD31 939 aa17.57■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Znf518aB2RRF6 1478 aaKnown RBP17.56■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Kif14L0N7N1 1674 aaKnown RBP17.56■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Supt5hO55201 1082 aaKnown RBP17.55■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Aebp2Q9Z248 504 aaKnown RBP17.55■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Myo5cE9Q1F5 1742 aa17.54■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Ppp1r18Q8BQ30 594 aa17.54■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Plch2A2AP18 1501 aa17.54■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Dhx9O70133 1380 aaKnown RBP17.54■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Wdr66E9Q743 1299 aa17.53■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Cdc42bpgQ80UW5 1551 aa17.52■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Cd109Q8R422 1442 aa17.52■□□□□ 0.4
Ldb3-203ENSMUST00000022330 Pcgf6Q99NA9 353 aa17.52■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Cul9Q80TT8 1865 aa17.51■□□□□ 0.39
Ldb3-203ENSMUST00000022330 RereQ80TZ9 1558 aa17.51■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Topbp1Q6ZQF0 1515 aa17.51■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Dip2cE9PWR4 1557 aa17.5■□□□□ 0.39
Ldb3-203ENSMUST00000022330 ClspnQ80YR7 1315 aa17.49■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Pde4cQ3UEI1 686 aa17.49■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Hecw2Q6I6G8 1578 aa17.48■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Nsd2Q8BVE8 1365 aa17.48■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Dot1lQ6XZL8 1540 aa17.48■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Ptch1Q61115 1434 aa17.48■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Zbtb7cQ8VCZ7 619 aa17.48■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Atp7aQ64430 1491 aa17.47■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Fndc1E9Q043 1732 aa17.47■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Uggt2E9Q4X2 1504 aa17.46■□□□□ 0.39
Ldb3-203ENSMUST00000022330 Myom3A2ABU4 1439 aa17.46■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Synj2Q9D2G5 1434 aa17.46■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Gli2Q0VGT2 1544 aa17.46■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Sall2Q9QX96 1004 aa17.45■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Trpm1Q2TV84 1622 aa17.44■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Rock1P70335 1354 aa17.44■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Kif3bQ61771 747 aa17.44■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Ppip5k1A2ARP1 1436 aa17.43■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Ylpm1Q9R0I7 1386 aaKnown RBP17.42■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Hnrnpul2Q00PI9 745 aaKnown RBP17.42■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Tmem131lQ3U3D7 1597 aa17.42■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Abca6Q8K441 1624 aa17.42■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Mbd5B1AYB6 1498 aa17.4■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Naip6Q9JIB6 1403 aa17.4■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Hdac5Q9Z2V6 1113 aa17.4■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Prex1Q69ZK0 1650 aa17.4■□□□□ 0.38
Ldb3-203ENSMUST00000022330 Tarbp1E9Q368 1579 aa17.39■□□□□ 0.37
Ldb3-203ENSMUST00000022330 AnkarA2RT91 1465 aa17.38■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Gm13697A2AK42 830 aa17.38■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Ppargc1bQ8VHJ7 1014 aa17.37■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Iqgap1Q9JKF1 1657 aaKnown RBP17.36■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Yeats2Q3TUF7 1407 aa17.36■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Rgl3Q3UYI5 709 aa17.36■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Edc4Q3UJB9 1406 aaKnown RBP17.35■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Zmym4A2A791 1549 aaKnown RBP17.33■□□□□ 0.37
Ldb3-203ENSMUST00000022330 Iqgap3F8VQ29 1632 aa17.33■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Cpsf1Q9EPU4 1441 aaKnown RBP17.32■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Akap12Q9WTQ5 1684 aa17.32■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Neurod1Q60867 357 aa17.31■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Mug2P28666 1451 aa17.31■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Ttc21bQ0HA38 1315 aa17.3■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Washc2Q6PGL7 1334 aa17.3■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Cfap65Q3V0B4 1847 aa17.29■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Polr3aB2RXC6 1390 aa17.28■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Adamts7Q68SA9 1657 aa17.28■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Prdm2A2A7B5 1709 aaKnown RBP17.27■□□□□ 0.36
Ldb3-203ENSMUST00000022330 Talpid3E9PV87 1520 aa17.27■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Abca8aQ8K442 1620 aa17.26■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Ino80Q6ZPV2 1559 aa17.25■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Cdk13Q69ZA1 1511 aaKnown RBP17.25■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Abcc6Q9R1S7 1498 aa17.25■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Qser1A2BIE1 1698 aa17.25■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Adamts13Q769J6 1426 aa17.25■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Dapk1Q80YE7 1442 aa17.25■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Tecpr2Q3UH45 1423 aa17.24■□□□□ 0.35
Ldb3-203ENSMUST00000022330 RalgapbQ8BQZ4 1484 aa17.24■□□□□ 0.35
Ldb3-203ENSMUST00000022330 NpatQ8BMA5 1420 aa17.23■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Efcab6Q6P1E8 1516 aa17.22■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Tulp4Q9JIL5 1547 aa17.22■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Ehbp1l1Q99MS7 1716 aa17.22■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Adgrb3Q80ZF8 1522 aa17.22■□□□□ 0.35
Ldb3-203ENSMUST00000022330 ErbinQ80TH2 1402 aa17.22■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Erich6D3Z6S9 713 aa17.21■□□□□ 0.35
Ldb3-203ENSMUST00000022330 Grwd1Q810D6 446 aaKnown RBP17.19■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Rsph4aQ8BYM7 716 aa17.19■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Mroh3A0A1D5RM54 893 aa17.19■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Pcdh10E9PXQ7 1057 aa17.19■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Knl1Q66JQ7 1612 aa17.18■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Ncoa1P70365 1447 aa17.18■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Sin3aQ60520 1274 aaKnown RBP17.17■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Uggt1Q6P5E4 1551 aa17.17■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Myom2Q14BI5 1463 aa17.17■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Rundc1Q0VDN7 615 aa17.16■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Cep152A2AUM9 1736 aaKnown RBP17.15■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Cwc22Q8C5N3 908 aaKnown RBP17.15■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Card11Q8CIS0 1159 aa17.15■□□□□ 0.34
Ldb3-203ENSMUST00000022330 Ifit1bl1D3Z6F0 470 aa17.14■□□□□ 0.33
Ldb3-203ENSMUST00000022330 CltcQ68FD5 1675 aaKnown RBP17.14■□□□□ 0.33
Ldb3-203ENSMUST00000022330 RictorQ6QI06 1708 aa17.13■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Sall3Q62255 1320 aa17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms