RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Rapgef2Q8CHG7 1496 aa11.45□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Tsen2Q6P7W5 460 aa11.45□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Sart1Q9Z315 806 aaKnown RBP11.45□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 CrebrfQ8CDG5 640 aaKnown RBP11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Atp6v1dP57746 247 aa11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Cgnl1Q6AW69 1298 aa11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Ap3b2Q9JME5 1082 aa11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Ylpm1Q9R0I7 1386 aaKnown RBP11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Utp14aQ640M1 767 aaKnown RBP11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Pank3Q8R2W9 370 aa11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Usp47Q8BY87 1376 aa11.44□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Stk31Q99MW1 1018 aa11.43□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Ccdc146E9Q9F7 977 aa11.42□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Slc4a10Q5DTL9 1118 aa11.41□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Rrp12Q6P5B0 1295 aaKnown RBP11.41□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Phldb1Q6PDH0 1371 aaKnown RBP11.41□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Smg6P61406 1418 aaKnown RBP11.41□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Synj1Q8CHC4 1574 aa11.4□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Ccdc47Q9D024 483 aaKnown RBP11.4□□□□□ -0.58
Pdgfra-201ENSMUST00000000476 Kiaa0754Q69ZZ9 979 aa11.39□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Pak3Q61036 559 aa11.39□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Ccer1Q9CQL2 403 aa11.39□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Tpd52l1O54818 204 aa11.39□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 SlkO54988 1233 aa11.39□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Ccdc60Q8C4J0 545 aa11.39□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 ChgaP26339 463 aaKnown RBP11.38□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Rock1P70335 1354 aa11.38□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Usp40Q8BWR4 1235 aa11.37□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Inpp5dQ9ES52 1191 aa11.37□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Cspp1B2RX88 1205 aa11.37□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Rsph3aQ3UFY4 516 aa11.37□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Crybg2B7ZCC2 1516 aa11.37□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Cabp4Q8VHC5 271 aa11.37□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 GsdmaQ9EST1 446 aa11.37□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Mical1Q8VDP3 1048 aa11.36□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Kif7B7ZNG0 1348 aa11.36□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Cecr2E9Q2Z1 1453 aa11.36□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Shq1Q7TMX5 569 aa11.36□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Rab11fip3Q8CHD8 1047 aa11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Tpm3P21107 285 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 G3bp1P97855 465 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Trim30aP15533 496 aa11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Gpatch11Q3UFS4 262 aa11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Nolc1E9Q5C9 702 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Fam184bQ0KK56 942 aa11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Sf3a1Q8K4Z5 791 aaKnown RBP11.35□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 Ddrgk1Q80WW9 315 aa11.34□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 St18Q80TY4 1045 aa11.34□□□□□ -0.59
Pdgfra-201ENSMUST00000000476 SetQ9EQU5 289 aaKnown RBP11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Becn1O88597 448 aa11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Isy1Q69ZQ2 285 aaKnown RBP11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Ncoa2Q61026 1462 aa11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 AppP12023 770 aa11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 4933402E13RikQ9D4D2 429 aa11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 LrpprcQ6PB66 1392 aaKnown RBP11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 WrnO09053 1401 aa11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Mink1Q9JM52 1308 aa11.33□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Smarca2Q6DIC0 1577 aa11.32□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Cc2d2bA0A286YDU8 1405 aa11.32□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Smarca4Q3TKT4 1613 aaKnown RBP11.32□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Filip1lQ6P6L0 1131 aa11.32□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Nap1l3Q794H2 544 aa11.32□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Vps53Q8CCB4 832 aa11.32□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Atad2bE9Q166 1460 aaKnown RBP11.32□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Smc4Q8CG47 1286 aa11.31□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Dapk1Q80YE7 1442 aa11.31□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Casq1O09165 405 aa11.31□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Ralbp1Q62172 648 aa11.3□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Cttnbp2B9EJA2 1648 aa11.3□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Gm21969J3QJZ1 289 aa11.3□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Cc2d1aQ8K1A6 943 aa11.3□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Cux1P53564 1515 aa11.3□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 ErbinQ80TH2 1402 aa11.3□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Srek1Q8BZX4 494 aaKnown RBP11.3□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 VgfQ0VGU4 617 aa11.29□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Zscan10Q3URR7 782 aa11.29□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 KinQ8K339 391 aa11.29□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Tomm22Q9CPQ3 142 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Mre11Q61216 706 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Eif2s2Q99L45 331 aaKnown RBP11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Tpm2P58774 284 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Tpm4Q6IRU2 248 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Kri1Q8VDQ9 704 aaKnown RBP11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Tceal9Q9DD24 104 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Dhx29Q6PGC1 1365 aaKnown RBP11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Triml2E9PW10 424 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 AampJ3QN89 436 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Chmp7Q8R1T1 451 aa11.28□□□□□ -0.6
Pdgfra-201ENSMUST00000000476 Gm21190A0A0G2JGJ6 266 aa11.27□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Glipr1l2Q9CQ35 332 aa11.27□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Tpm1P58771 284 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Trim58Q5NCC9 485 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Esx1O88933 382 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ddx11Q6AXC6 880 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Sh3bgrQ9WUZ7 214 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Evc2Q8K1G2 1220 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Soga1E1U8D0 1418 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Cplx2P84086 134 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ush1cQ9ES64 910 aa11.26□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Tdrd9Q14BI7 1383 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms