RNA–Protein interactions for RNA: YPL149W

ATG5, Transcript of Conserved protein involved in autophagy and the Cvt pathway, yeast

Gene ATG5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG5	YPL149W	HAL1	Q01766	294 aa		3.16	□□□□□ -1.9
ATG5	YPL149W	VPS20	Q04272	221 aa		3.16	□□□□□ -1.9
ATG5	YPL149W	YLR297W	Q05899	129 aa		3.16	□□□□□ -1.9
ATG5	YPL149W	SLM3	Q12093	417 aa		3.16	□□□□□ -1.9
ATG5	YPL149W	PRB1	P09232	635 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	MIR1	P23641	311 aa	Known RBP	3.15	□□□□□ -1.91
ATG5	YPL149W	LDS1	P31379	325 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	UTH1	P36135	365 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	SOL2	P37262	315 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	IGD1	P43598	195 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	YFR018C	P43599	363 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	YGL039W	P53183	348 aa	Known RBP	3.15	□□□□□ -1.91
ATG5	YPL149W	TRM82	Q03774	444 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	GAS2	Q06135	555 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	YLR177W	Q06251	628 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	FRE8	Q12209	686 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	SFM1	Q12314	213 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	APC2	Q12440	853 aa		3.15	□□□□□ -1.91
ATG5	YPL149W	CBP2	P03874	630 aa	Predicted RBP	3.14	□□□□□ -1.91
ATG5	YPL149W	COX4	P04037	155 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	UNG1	P12887	359 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	ERG9	P29704	444 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	PMT2	P31382	759 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	DEP1	P31385	405 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	YPS1	P32329	569 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	COS9	P36034	407 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	SWC5	P38326	303 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	AIM23	P47015	356 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	YGR168C	P53293	376 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	YOR376W	Q08900	122 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	DDC1	Q08949	612 aa		3.14	□□□□□ -1.91
ATG5	YPL149W	STE7	P06784	515 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	RPL18A	P0CX49	186 aa	Known RBP	3.13	□□□□□ -1.91
ATG5	YPL149W	RPL18B	P0CX50	186 aa	Known RBP	3.13	□□□□□ -1.91
ATG5	YPL149W	PET18	P25362	215 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	YBR241C	P38142	488 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	BMT2	P38278	337 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	MOB2	P43563	287 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	BIO3	P50277	480 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	CDH1	P53197	566 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	PXR1	P53335	271 aa	Predicted RBP	3.13	□□□□□ -1.91
ATG5	YPL149W	RVB1	Q03940	463 aa	Known RBP	3.13	□□□□□ -1.91
ATG5	YPL149W	CAB5	Q03941	241 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	YDR115W	Q04598	105 aa		3.13	□□□□□ -1.91
ATG5	YPL149W	GCD2	P12754	651 aa	Predicted RBP	3.12	□□□□□ -1.91
ATG5	YPL149W	VMA5	P31412	392 aa	Known RBP	3.12	□□□□□ -1.91
ATG5	YPL149W	RCK2	P38623	610 aa		3.12	□□□□□ -1.91
ATG5	YPL149W	TAF6	P53040	516 aa		3.12	□□□□□ -1.91
ATG5	YPL149W	RNH201	P53942	307 aa		3.12	□□□□□ -1.91
ATG5	YPL149W	SUR7	P54003	302 aa		3.12	□□□□□ -1.91
ATG5	YPL149W	SLT2	Q00772	484 aa		3.12	□□□□□ -1.91
ATG5	YPL149W	MRPS16	Q02608	121 aa		3.12	□□□□□ -1.91
ATG5	YPL149W	ADD37	Q03233	198 aa		3.12	□□□□□ -1.91
ATG5	YPL149W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
ATG5	YPL149W	RBK1	P25332	333 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	TOA1	P32773	286 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	BUD2	P33314	1104 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	GPI18	P38211	433 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	MMS21	P38632	267 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	SMF2	P38778	549 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	SEH1	P53011	349 aa	Known RBP	3.11	□□□□□ -1.91
ATG5	YPL149W	TSA2	Q04120	196 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	ALE1	Q08548	619 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	RPN6	Q12377	434 aa		3.11	□□□□□ -1.91
ATG5	YPL149W	RPL21B	Q12672	160 aa	Known RBP	3.11	□□□□□ -1.91
ATG5	YPL149W	FOL3	Q12676	427 aa	Predicted RBP	3.11	□□□□□ -1.91
ATG5	YPL149W	DCC1	P25559	380 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	MNN9	P39107	395 aa	Known RBP	3.1	□□□□□ -1.91
ATG5	YPL149W	YJR054W	P47114	497 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	PGU1	P47180	361 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	RIB4	P50861	169 aa	Predicted RBP	3.1	□□□□□ -1.91
ATG5	YPL149W	YGR015C	P53208	328 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	DBP6	P53734	629 aa	Known RBP	3.1	□□□□□ -1.91
ATG5	YPL149W	HCH1	P53834	153 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	CUR1	Q06469	252 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	HIF1	Q12373	385 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	YPR1	Q12458	312 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	PSK1	P31374	1356 aa		3.1	□□□□□ -1.91
ATG5	YPL149W	YKL162C	P36052	402 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	DTR1	P38125	572 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	FET3	P38993	636 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	PEX22	P39718	180 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	ALD5	P40047	520 aa	Known RBP	3.09	□□□□□ -1.91
ATG5	YPL149W	PCL7	P40186	285 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	UTP25	P40498	721 aa	Known RBP	3.09	□□□□□ -1.91
ATG5	YPL149W	STB1	P42845	420 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	YGL262W	P53054	175 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	YPS5	P53057	165 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	VHT1	P53241	593 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	SRO7	Q12038	1033 aa		3.09	□□□□□ -1.91
ATG5	YPL149W	SPS100	P13130	326 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	URA10	P30402	227 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	MEI5	P32489	222 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	PDC2	P32896	925 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	SHE1	P38200	338 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	FHL1	P39521	936 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	KTR6	P54070	446 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	MRX11	Q03079	207 aa		3.08	□□□□□ -1.92
ATG5	YPL149W	YMR111C	Q04461	462 aa	Predicted RBP	3.08	□□□□□ -1.92
ATG5	YPL149W	MCH1	Q07376	486 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms