RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W ARO4P32449 370 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W EFB1P32471 206 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W RAD5P32849 1169 aaPredicted RBP3.17□□□□□ -1.9
VPS17YOR132W SIP2P34164 415 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W MCR1P36060 302 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W RPC37P36121 282 aa3.17□□□□□ -1.9
VPS17YOR132W DUG2P38149 878 aa3.17□□□□□ -1.9
VPS17YOR132W FZO1P38297 855 aa3.17□□□□□ -1.9
VPS17YOR132W TAE1P38340 232 aa3.17□□□□□ -1.9
VPS17YOR132W YHR045WP38775 560 aa3.17□□□□□ -1.9
VPS17YOR132W YHR177WP38867 453 aa3.17□□□□□ -1.9
VPS17YOR132W HOP2P53187 214 aa3.17□□□□□ -1.9
VPS17YOR132W CGR1P53188 120 aa3.17□□□□□ -1.9
VPS17YOR132W VOA1P53262 265 aa3.17□□□□□ -1.9
VPS17YOR132W YGR117CP53270 476 aa3.17□□□□□ -1.9
VPS17YOR132W BUD32P53323 261 aa3.17□□□□□ -1.9
VPS17YOR132W PET117Q02771 107 aa3.17□□□□□ -1.9
VPS17YOR132W YMR087WQ04299 284 aa3.17□□□□□ -1.9
VPS17YOR132W NCE102Q12207 173 aaRIP-Chip data3.17□□□□□ -1.9not detected
VPS17YOR132W MED4Q12343 284 aa3.17□□□□□ -1.9
VPS17YOR132W FMP16Q12497 93 aa3.17□□□□□ -1.9
VPS17YOR132W AI5_BETAQ9ZZX0 354 aa3.17□□□□□ -1.9
VPS17YOR132W ADE4P04046 510 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W RAD3P06839 778 aa3.17□□□□□ -1.9
VPS17YOR132W PEP4P07267 405 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W SEC63P14906 663 aa3.17□□□□□ -1.9
VPS17YOR132W HXT2P23585 541 aa3.17□□□□□ -1.9
VPS17YOR132W MGT1P26188 188 aa3.17□□□□□ -1.9
VPS17YOR132W NDC1P32500 655 aa3.17□□□□□ -1.9
VPS17YOR132W ECM25P32525 599 aa3.17□□□□□ -1.9
VPS17YOR132W SPR1P32603 445 aa3.17□□□□□ -1.9
VPS17YOR132W UTR4P32626 227 aa3.17□□□□□ -1.9
VPS17YOR132W RAD23P32628 398 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W PTR2P32901 601 aa3.17□□□□□ -1.9
VPS17YOR132W QDR3P38227 689 aa3.17□□□□□ -1.9
VPS17YOR132W POP4P38336 279 aa3.17□□□□□ -1.9
VPS17YOR132W ALP1P38971 573 aa3.17□□□□□ -1.9
VPS17YOR132W RCY1P39531 840 aa3.17□□□□□ -1.9
VPS17YOR132W ATM1P40416 690 aa3.17□□□□□ -1.9
VPS17YOR132W RTT101P47050 842 aa3.17□□□□□ -1.9
VPS17YOR132W ILM1P47155 203 aa3.17□□□□□ -1.9
VPS17YOR132W YJR154WP47181 346 aa3.17□□□□□ -1.9
VPS17YOR132W DRN1P53255 507 aaKnown RBP3.17□□□□□ -1.9
VPS17YOR132W YMR027WQ04371 470 aa3.17□□□□□ -1.9
VPS17YOR132W SSQ1Q05931 657 aaPredicted RBP3.17□□□□□ -1.9
VPS17YOR132W IES4Q08561 116 aa3.17□□□□□ -1.9
VPS17YOR132W YDR018CQ12185 396 aa3.17□□□□□ -1.9
VPS17YOR132W AHC1Q12433 566 aa3.17□□□□□ -1.9
VPS17YOR132W DCP1Q12517 231 aaPredicted RBP3.17□□□□□ -1.9
VPS17YOR132W SCEIP03882 235 aa3.16□□□□□ -1.9
VPS17YOR132W RPL15AP05748 204 aaKnown RBP3.16□□□□□ -1.9
VPS17YOR132W RPS3P05750 240 aaKnown RBP3.16□□□□□ -1.9
VPS17YOR132W CDC36P06100 191 aaPredicted RBP3.16□□□□□ -1.9
VPS17YOR132W ATP10P18496 279 aa3.16□□□□□ -1.9
VPS17YOR132W SEC14P24280 304 aaKnown RBP3.16□□□□□ -1.9
VPS17YOR132W RRT12P25381 491 aa3.16□□□□□ -1.9
VPS17YOR132W YPS1P32329 569 aa3.16□□□□□ -1.9
VPS17YOR132W NRP1P32770 719 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
VPS17YOR132W FRE1P32791 686 aa3.16□□□□□ -1.9
VPS17YOR132W BUD2P33314 1104 aa3.16□□□□□ -1.9
VPS17YOR132W YKR015CP36111 568 aa3.16□□□□□ -1.9
VPS17YOR132W KAP104P38217 918 aaKnown RBP3.16□□□□□ -1.9
VPS17YOR132W PET100P38958 111 aa3.16□□□□□ -1.9
VPS17YOR132W YER085CP40058 173 aa3.16□□□□□ -1.9
VPS17YOR132W RIO2P40160 425 aaKnown RBP3.16□□□□□ -1.9
VPS17YOR132W YNL146WP53906 100 aa3.16□□□□□ -1.9
VPS17YOR132W IMP4P53941 290 aaKnown RBP3.16□□□□□ -1.9
VPS17YOR132W SNZ1Q03148 297 aa3.16□□□□□ -1.9
VPS17YOR132W MRPS17Q03246 237 aaPredicted RBP3.16□□□□□ -1.9
VPS17YOR132W APC4Q04601 652 aa3.16□□□□□ -1.9
VPS17YOR132W RRN11Q04712 507 aa3.16□□□□□ -1.9
VPS17YOR132W YMR310CQ04867 317 aaPredicted RBP3.16□□□□□ -1.9
VPS17YOR132W ERP1Q05359 219 aaKnown RBP3.16□□□□□ -1.9
VPS17YOR132W YOR365CQ08844 703 aa3.16□□□□□ -1.9
VPS17YOR132W ERP3Q12403 225 aa3.16□□□□□ -1.9
VPS17YOR132W SPO24Q3E752 67 aa3.16□□□□□ -1.9
VPS17YOR132W TEF1P02994 458 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W MAS1P10507 462 aa3.15□□□□□ -1.9
VPS17YOR132W SAR1P20606 190 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W IMP3P32899 183 aaPredicted RBP3.15□□□□□ -1.9
VPS17YOR132W PAD1P33751 242 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
VPS17YOR132W SOR1P35497 357 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W RRN10P38204 145 aa3.15□□□□□ -1.9
VPS17YOR132W STP2P38704 541 aa3.15□□□□□ -1.9
VPS17YOR132W SMF2P38778 549 aa3.15□□□□□ -1.9
VPS17YOR132W RRP4P38792 359 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W VPS52P39904 641 aa3.15□□□□□ -1.9
VPS17YOR132W CDC40P40968 455 aaPredicted RBP3.15□□□□□ -1.9
VPS17YOR132W SPG5P42933 373 aa3.15□□□□□ -1.9
VPS17YOR132W ASG7P46993 209 aa3.15□□□□□ -1.9
VPS17YOR132W TRF5P48561 642 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W TAF6P53040 516 aa3.15□□□□□ -1.9
VPS17YOR132W KTR6P54070 446 aa3.15□□□□□ -1.9
VPS17YOR132W RNY1Q02933 434 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W SRL4Q03085 281 aa3.15□□□□□ -1.9
VPS17YOR132W IVY1Q04934 453 aa3.15□□□□□ -1.9
VPS17YOR132W RTN1Q04947 295 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W MRPL35Q06678 367 aa3.15□□□□□ -1.9
VPS17YOR132W SYO1Q07395 620 aa3.15□□□□□ -1.9
VPS17YOR132W SOR2Q07786 357 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms