RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W CBR1P38626 284 aaKnown RBP2.89□□□□□ -1.95
MSH2YOL090W CCT4P39078 528 aaKnown RBP2.89□□□□□ -1.95
MSH2YOL090W YVH1Q02256 364 aaKnown RBP2.89□□□□□ -1.95
MSH2YOL090W ATG34Q12292 412 aa2.89□□□□□ -1.95
MSH2YOL090W SNF8Q12483 233 aa2.89□□□□□ -1.95
MSH2YOL090W YKL183C-AQ3E765 70 aa2.89□□□□□ -1.95
MSH2YOL090W RAD7P06779 565 aa2.88□□□□□ -1.95
MSH2YOL090W MRP2P10663 115 aaPredicted RBP2.88□□□□□ -1.95
MSH2YOL090W TMT1P32643 299 aa2.88□□□□□ -1.95
MSH2YOL090W REC114P32841 428 aa2.88□□□□□ -1.95
MSH2YOL090W DTR1P38125 572 aa2.88□□□□□ -1.95
MSH2YOL090W AGP3P43548 558 aa2.88□□□□□ -1.95
MSH2YOL090W LIF1P53150 421 aa2.88□□□□□ -1.95
MSH2YOL090W OKP1P53298 406 aa2.88□□□□□ -1.95
MSH2YOL090W MKC7P53379 596 aa2.88□□□□□ -1.95
MSH2YOL090W SMM1P53720 384 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W YPL014WQ02606 381 aa2.88□□□□□ -1.95
MSH2YOL090W THI3Q07471 609 aa2.88□□□□□ -1.95
MSH2YOL090W SNA4Q07549 140 aa2.88□□□□□ -1.95
MSH2YOL090W YOL075CQ08234 1294 aa2.88□□□□□ -1.95
MSH2YOL090W YOR387CQ08910 206 aa2.88□□□□□ -1.95
MSH2YOL090W YRA1Q12159 226 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W YLR108CQ12259 485 aa2.88□□□□□ -1.95
MSH2YOL090W SEY1Q99287 776 aa2.88□□□□□ -1.95
MSH2YOL090W YDR157WA0A023PZE8 133 aa2.88□□□□□ -1.95
MSH2YOL090W RPS13P05756 151 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W GAS1P22146 559 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W KIN3P22209 435 aa2.88□□□□□ -1.95
MSH2YOL090W RPL24BP24000 155 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W YCR006CP25350 157 aa2.88□□□□□ -1.95
MSH2YOL090W ERG9P29704 444 aa2.88□□□□□ -1.95
MSH2YOL090W AIM3P38266 947 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W SIM1P40472 476 aa2.88□□□□□ -1.95
MSH2YOL090W YCH1P42937 148 aa2.88□□□□□ -1.95
MSH2YOL090W IMD3P50095 523 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W SEH1P53011 349 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W OST6Q03723 332 aa2.88□□□□□ -1.95
MSH2YOL090W RVB1Q03940 463 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W REX4Q08237 289 aa2.88□□□□□ -1.95
MSH2YOL090W SLF1Q12034 447 aaKnown RBP2.88□□□□□ -1.95
MSH2YOL090W RRI1Q12468 440 aa2.88□□□□□ -1.95
MSH2YOL090W NCB2Q92317 146 aa2.88□□□□□ -1.95
MSH2YOL090W PPR1P07272 904 aaPredicted RBP2.87□□□□□ -1.95
MSH2YOL090W VPS1P21576 704 aaKnown RBP2.87□□□□□ -1.95
MSH2YOL090W DAL82P21705 255 aa2.87□□□□□ -1.95
MSH2YOL090W SAT4P25333 603 aaKnown RBP2.87□□□□□ -1.95
MSH2YOL090W PUT3P25502 979 aaPredicted RBP2.87□□□□□ -1.95
MSH2YOL090W VMA5P31412 392 aaKnown RBP2.87□□□□□ -1.95
MSH2YOL090W YMC2P38087 329 aa2.87□□□□□ -1.95
MSH2YOL090W EXO1P39875 702 aa2.87□□□□□ -1.95
MSH2YOL090W SHO1P40073 367 aa2.87□□□□□ -1.95
MSH2YOL090W FAU1P40099 211 aa2.87□□□□□ -1.95
MSH2YOL090W YNL194CP40169 301 aa2.87□□□□□ -1.95
MSH2YOL090W HOC1P47124 396 aa2.87□□□□□ -1.95
MSH2YOL090W AIM24P47127 394 aa2.87□□□□□ -1.95
MSH2YOL090W SSN8P47821 323 aa2.87□□□□□ -1.95
MSH2YOL090W TIS11P47977 285 aa2.87□□□□□ -1.95
MSH2YOL090W ADH6Q04894 360 aaKnown RBP2.87□□□□□ -1.95
MSH2YOL090W PBP4Q07362 185 aaKnown RBP2.87□□□□□ -1.95
MSH2YOL090W BRR1Q99177 341 aaPredicted RBP2.87□□□□□ -1.95
MSH2YOL090W RGS2Q99188 309 aa2.87□□□□□ -1.95
MSH2YOL090W ATP6P00854 259 aa2.87□□□□□ -1.95
MSH2YOL090W HEM2P05373 342 aa2.87□□□□□ -1.95
MSH2YOL090W REV1P12689 985 aa2.87□□□□□ -1.95
MSH2YOL090W STE18P18852 110 aa2.87□□□□□ -1.95
MSH2YOL090W SLM5P25345 492 aaKnown RBP2.87□□□□□ -1.95
MSH2YOL090W ROT2P38138 954 aa2.87□□□□□ -1.95
MSH2YOL090W IST2P38250 946 aa2.87□□□□□ -1.95
MSH2YOL090W PHB2P50085 310 aa2.87□□□□□ -1.95
MSH2YOL090W NBP1P52919 319 aaPredicted RBP2.87□□□□□ -1.95
MSH2YOL090W MIG2P53035 382 aa2.87□□□□□ -1.95
MSH2YOL090W ALG11P53954 548 aaKnown RBP2.87□□□□□ -1.95
MSH2YOL090W YPL080CQ02826 108 aa2.87□□□□□ -1.95
MSH2YOL090W TMN2Q04562 672 aa2.87□□□□□ -1.95
MSH2YOL090W YLL056CQ12177 298 aa2.87□□□□□ -1.95
MSH2YOL090W SAL1D6W196 494 aa2.86□□□□□ -1.95
MSH2YOL090W QCR7P00128 127 aa2.86□□□□□ -1.95
MSH2YOL090W YAK1P14680 807 aa2.86□□□□□ -1.95
MSH2YOL090W POP5P28005 173 aa2.86□□□□□ -1.95
MSH2YOL090W APE2P32454 952 aaKnown RBP2.86□□□□□ -1.95
MSH2YOL090W SPO23P33757 523 aa2.86□□□□□ -1.95
MSH2YOL090W SEC72P39742 193 aaKnown RBP2.86□□□□□ -1.95
MSH2YOL090W YER184CP39961 794 aa2.86□□□□□ -1.95
MSH2YOL090W RTT101P47050 842 aa2.86□□□□□ -1.95
MSH2YOL090W YPT11P48559 417 aa2.86□□□□□ -1.95
MSH2YOL090W PHO23P50947 330 aa2.86□□□□□ -1.95
MSH2YOL090W SMX3P54999 86 aaPredicted RBP2.86□□□□□ -1.95
MSH2YOL090W RHO4Q00246 291 aa2.86□□□□□ -1.95
MSH2YOL090W SED5Q01590 340 aa2.86□□□□□ -1.95
MSH2YOL090W VBA1Q04301 562 aa2.86□□□□□ -1.95
MSH2YOL090W KRE28Q04431 385 aa2.86□□□□□ -1.95
MSH2YOL090W YMR226CQ05016 267 aaKnown RBP2.86□□□□□ -1.95
MSH2YOL090W FAR8Q05040 523 aa2.86□□□□□ -1.95
MSH2YOL090W ALE1Q08548 619 aa2.86□□□□□ -1.95
MSH2YOL090W ORT1Q12375 292 aa2.86□□□□□ -1.95
MSH2YOL090W DET1Q99288 334 aaKnown RBP2.86□□□□□ -1.95
MSH2YOL090W ARF1P11076 181 aaKnown RBP2.86□□□□□ -1.95
MSH2YOL090W HEM15P16622 393 aa2.86□□□□□ -1.95
MSH2YOL090W SPO12P17123 173 aa2.86□□□□□ -1.95
MSH2YOL090W YMR31P19955 123 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms